Warning: Permanently added '54.161.133.160' (ED25519) to the list of known hosts.

You can reproduce this build on your computer by running:

  sudo dnf install copr-rpmbuild
  /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/7980029-fedora-rawhide-x86_64 --chroot fedora-rawhide-x86_64


Version: 0.73
PID: 7125
Logging PID: 7126
Task:
{'allow_user_ssh': False,
 'appstream': False,
 'background': True,
 'bootstrap': 'off',
 'build_id': 7980029,
 'buildroot_pkgs': [],
 'chroot': 'fedora-rawhide-x86_64',
 'enable_net': False,
 'fedora_review': False,
 'git_hash': '8eb6e563398abf7a6eebe92baeac68db7234f5ec',
 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/@python/python3.12/pymol',
 'isolation': 'default',
 'memory_reqs': 2048,
 'package_name': 'pymol',
 'package_version': '2.5.0-13',
 'project_dirname': 'python3.12',
 'project_name': 'python3.12',
 'project_owner': '@python',
 'repo_priority': None,
 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/@python/python3.12/fedora-rawhide-x86_64/',
            'id': 'copr_base',
            'name': 'Copr repository',
            'priority': None},
           {'baseurl': 'http://kojipkgs.fedoraproject.org/repos/rawhide/latest/$basearch/',
            'id': 'http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch',
            'name': 'Additional repo http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch'}],
 'sandbox': '@python/python3.12--https://src.fedoraproject.org/user/msuchy',
 'source_json': {},
 'source_type': None,
 'ssh_public_keys': None,
 'submitter': 'https://src.fedoraproject.org/user/msuchy',
 'tags': [],
 'task_id': '7980029-fedora-rawhide-x86_64',
 'timeout': 18000,
 'uses_devel_repo': False,
 'with_opts': [],
 'without_opts': []}

Running: git clone https://copr-dist-git.fedorainfracloud.org/git/@python/python3.12/pymol /var/lib/copr-rpmbuild/workspace/workdir-c4k1cflw/pymol --depth 500 --no-single-branch --recursive

cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/@python/python3.12/pymol', '/var/lib/copr-rpmbuild/workspace/workdir-c4k1cflw/pymol', '--depth', '500', '--no-single-branch', '--recursive']
cwd: .
rc: 0
stdout: 
stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-c4k1cflw/pymol'...

Running: git checkout 8eb6e563398abf7a6eebe92baeac68db7234f5ec --

cmd: ['git', 'checkout', '8eb6e563398abf7a6eebe92baeac68db7234f5ec', '--']
cwd: /var/lib/copr-rpmbuild/workspace/workdir-c4k1cflw/pymol
rc: 0
stdout: 
stderr: Note: switching to '8eb6e563398abf7a6eebe92baeac68db7234f5ec'.

You are in 'detached HEAD' state. You can look around, make experimental
changes and commit them, and you can discard any commits you make in this
state without impacting any branches by switching back to a branch.

If you want to create a new branch to retain commits you create, you may
do so (now or later) by using -c with the switch command. Example:

  git switch -c <new-branch-name>

Or undo this operation with:

  git switch -

Turn off this advice by setting config variable advice.detachedHead to false

HEAD is now at 8eb6e56 automatic import of pymol

Running: copr-distgit-client sources

cmd: ['copr-distgit-client', 'sources']
cwd: /var/lib/copr-rpmbuild/workspace/workdir-c4k1cflw/pymol
rc: 0
stdout: 
stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD
INFO: Reading stdout from command: git rev-parse HEAD
INFO: Reading sources specification file: sources
INFO: Downloading pymol-open-source-2.5.0.tar.gz
INFO: Reading stdout from command: curl --help all
INFO: Calling: curl -H Pragma: -o pymol-open-source-2.5.0.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/@python/python3.12/pymol/pymol-open-source-2.5.0.tar.gz/md5/1c2d43789dd5580958fd75672ecfd8e7/pymol-open-source-2.5.0.tar.gz
  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed
/usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated
100  9.9M  100  9.9M    0     0   273M      0 --:--:-- --:--:-- --:--:--  277M
INFO: Reading stdout from command: md5sum pymol-open-source-2.5.0.tar.gz
INFO: Downloading pymol.png
INFO: Calling: curl -H Pragma: -o pymol.png --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/@python/python3.12/pymol/pymol.png/md5/3bbd85dbd40f588f505ad988b6df2933/pymol.png
  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed
100 19466  100 19466    0     0  1325k      0 --:--:-- --:--:-- --:--:-- 1357k
INFO: Reading stdout from command: md5sum pymol.png

Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-c4k1cflw/pymol/pymol.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-c4k1cflw/pymol --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1725475717.931035 -r /var/lib/copr-rpmbuild/results/configs/child.cfg
INFO: mock.py version 5.6 starting (python version = 3.12.1, NVR = mock-5.6-1.fc39), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-c4k1cflw/pymol/pymol.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-c4k1cflw/pymol --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1725475717.931035 -r /var/lib/copr-rpmbuild/results/configs/child.cfg
Start: init plugins
INFO: tmpfs initialized
INFO: selinux enabled
INFO: chroot_scan: initialized
INFO: compress_logs: initialized
Finish: init plugins
INFO: Signal handler active
Start: run
INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-c4k1cflw/pymol/pymol.spec)  Config(fedora-rawhide-x86_64)
Start: clean chroot
Finish: clean chroot
Mock Version: 5.6
INFO: Mock Version: 5.6
Start: chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1725475717.931035/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start: cleaning package manager metadata
Finish: cleaning package manager metadata
INFO: enabled HW Info plugin
INFO: Package manager dnf5 detected and used (fallback)
INFO: Buildroot is handled by package management from host and used with --installroot:
  rpm-4.19.1.1-1.fc39.x86_64
  rpm-sequoia-1.6.0-1.fc39.x86_64
  python3-dnf-4.21.1-1.fc39.noarch
  python3-dnf-plugins-core-4.9.0-1.fc39.noarch
  yum-4.21.1-1.fc39.noarch
  dnf5-5.1.17-2.fc39.x86_64
  dnf5-plugins-5.1.17-2.fc39.x86_64
Start: installing minimal buildroot with dnf5
Updating and loading repositories:
 fedora                                 100% |  34.1 MiB/s |  21.6 MiB |  00m01s
 Copr repository                        100% |  46.6 MiB/s |   3.6 MiB |  00m00s
 Additional repo http_kojipkgs_fedorapr 100% | 130.8 MiB/s |  14.4 MiB |  00m00s
Repositories loaded.
Package                            Arch   Version                    Repository                                                         Size
Installing group/module packages:                                                                                                           
 bash                              x86_64 5.2.32-2.fc42              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   8.2 MiB
 bzip2                             x86_64 1.0.8-19.fc41              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  95.7 KiB
 coreutils                         x86_64 9.5-9.fc42                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   5.7 MiB
 cpio                              x86_64 2.15-2.fc41                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   1.1 MiB
 diffutils                         x86_64 3.10-8.fc41                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   1.6 MiB
 fedora-release-common             noarch 42-0.3                     http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  19.4 KiB
 findutils                         x86_64 1:4.10.0-4.fc41            http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   1.8 MiB
 gawk                              x86_64 5.3.0-4.fc41               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   1.7 MiB
 glibc-minimal-langpack            x86_64 2.40-3.fc41                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   0.0   B
 grep                              x86_64 3.11-9.fc41                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   1.0 MiB
 gzip                              x86_64 1.13-2.fc41                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 389.0 KiB
 info                              x86_64 7.1-3.fc41                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 361.8 KiB
 patch                             x86_64 2.7.6-25.fc41              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 266.7 KiB
 redhat-rpm-config                 noarch 294-1.fc42                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 186.4 KiB
 rpm-build                         x86_64 4.19.93-1.fc42             copr_base                                                     194.2 KiB
 sed                               x86_64 4.9-3.fc41                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 861.5 KiB
 shadow-utils                      x86_64 2:4.15.1-9.fc41            http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   4.1 MiB
 tar                               x86_64 2:1.35-4.fc41              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   2.9 MiB
 unzip                             x86_64 6.0-64.fc41                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 386.8 KiB
 util-linux                        x86_64 2.40.2-8.fc42              copr_base                                                       3.7 MiB
 which                             x86_64 2.21-42.fc41               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  80.2 KiB
 xz                                x86_64 1:5.6.2-2.fc41             http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   1.2 MiB
Installing dependencies:                                                                                                                    
 add-determinism                   x86_64 0.3.6-1.fc41               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   2.2 MiB
 alternatives                      x86_64 1.30-1.fc41                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  66.3 KiB
 ansible-srpm-macros               noarch 1-16.fc41                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  35.7 KiB
 audit-libs                        x86_64 4.0.2-1.fc41               copr_base                                                     331.3 KiB
 authselect                        x86_64 1.5.0-7.fc41               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 153.5 KiB
 authselect-libs                   x86_64 1.5.0-7.fc41               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 818.3 KiB
 basesystem                        noarch 11-21.fc41                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   0.0   B
 binutils                          x86_64 2.43.1-1.fc42              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  27.5 MiB
 build-reproducibility-srpm-macros noarch 0.3.6-1.fc41               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 735.0   B
 bzip2-libs                        x86_64 1.0.8-19.fc41              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  80.7 KiB
 ca-certificates                   noarch 2024.2.68_v8.0.302-3.fc41  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   2.3 MiB
 coreutils-common                  x86_64 9.5-9.fc42                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  11.2 MiB
 cracklib                          x86_64 2.9.11-6.fc41              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 238.9 KiB
 crypto-policies                   noarch 20240828-1.git5f66e81.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 136.9 KiB
 curl                              x86_64 8.9.1-3.fc42               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 796.2 KiB
 cyrus-sasl-lib                    x86_64 2.1.28-27.fc41             http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   2.3 MiB
 debugedit                         x86_64 5.0-17.fc41                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 199.3 KiB
 dwz                               x86_64 0.15-7.fc41                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 290.9 KiB
 ed                                x86_64 1.20.2-2.fc41              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 146.9 KiB
 efi-srpm-macros                   noarch 5-12.fc41                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  40.1 KiB
 elfutils                          x86_64 0.191-8.fc41               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   2.6 MiB
 elfutils-debuginfod-client        x86_64 0.191-8.fc41               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  64.9 KiB
 elfutils-default-yama-scope       noarch 0.191-8.fc41               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   1.8 KiB
 elfutils-libelf                   x86_64 0.191-8.fc41               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   1.2 MiB
 elfutils-libs                     x86_64 0.191-8.fc41               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 646.2 KiB
 fedora-gpg-keys                   noarch 42-0.1                     http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 126.4 KiB
 fedora-release                    noarch 42-0.3                     http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   0.0   B
 fedora-release-identity-basic     noarch 42-0.3                     http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 694.0   B
 fedora-repos                      noarch 42-0.1                     http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   4.9 KiB
 fedora-repos-rawhide              noarch 42-0.1                     http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   2.2 KiB
 file                              x86_64 5.45-7.fc41                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 103.5 KiB
 file-libs                         x86_64 5.45-7.fc41                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   9.9 MiB
 filesystem                        x86_64 3.18-23.fc41               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 106.0   B
 fonts-srpm-macros                 noarch 1:2.0.5-17.fc41            http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  55.8 KiB
 forge-srpm-macros                 noarch 0.3.2-1.fc41               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  39.0 KiB
 fpc-srpm-macros                   noarch 1.3-13.fc41                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 144.0   B
 gdb-minimal                       x86_64 15.1-1.fc42                copr_base                                                      13.0 MiB
 gdbm                              x86_64 1:1.23-7.fc41              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 460.9 KiB
 gdbm-libs                         x86_64 1:1.23-7.fc41              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 121.9 KiB
 ghc-srpm-macros                   noarch 1.9.1-2.fc41               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 747.0   B
 glibc                             x86_64 2.40-3.fc41                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   6.7 MiB
 glibc-common                      x86_64 2.40-3.fc41                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   1.0 MiB
 glibc-gconv-extra                 x86_64 2.40-3.fc41                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   8.0 MiB
 gmp                               x86_64 1:6.3.0-2.fc41             http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 811.4 KiB
 gnat-srpm-macros                  noarch 6-6.fc41                   http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   1.0 KiB
 go-srpm-macros                    noarch 3.6.0-3.fc41               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  60.8 KiB
 jansson                           x86_64 2.13.1-10.fc41             http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  88.3 KiB
 kernel-srpm-macros                noarch 1.0-24.fc41                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   1.9 KiB
 keyutils-libs                     x86_64 1.6.3-4.fc41               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  54.4 KiB
 krb5-libs                         x86_64 1.21.3-2.fc41              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   2.3 MiB
 libacl                            x86_64 2.3.2-2.fc41               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  40.0 KiB
 libarchive                        x86_64 3.7.4-3.fc41               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 922.6 KiB
 libattr                           x86_64 2.5.2-4.fc41               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  28.5 KiB
 libblkid                          x86_64 2.40.2-8.fc42              copr_base                                                     262.5 KiB
 libbrotli                         x86_64 1.1.0-5.fc41               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 837.6 KiB
 libcap                            x86_64 2.70-4.fc41                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 220.2 KiB
 libcap-ng                         x86_64 0.8.5-3.fc41               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  69.2 KiB
 libcom_err                        x86_64 1.47.1-3.fc41              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  67.2 KiB
 libcurl                           x86_64 8.9.1-3.fc42               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 818.1 KiB
 libeconf                          x86_64 0.6.2-3.fc41               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  58.0 KiB
 libevent                          x86_64 2.1.12-14.fc41             http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 895.7 KiB
 libfdisk                          x86_64 2.40.2-8.fc42              copr_base                                                     362.9 KiB
 libffi                            x86_64 3.4.6-3.fc42               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  86.4 KiB
 libgcc                            x86_64 14.2.1-1.fc42              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 274.6 KiB
 libgomp                           x86_64 14.2.1-1.fc42              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 523.4 KiB
 libidn2                           x86_64 2.3.7-2.fc41               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 329.1 KiB
 libmount                          x86_64 2.40.2-8.fc42              copr_base                                                     355.8 KiB
 libnghttp2                        x86_64 1.63.0-1.fc42              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 170.1 KiB
 libnsl2                           x86_64 2.0.1-2.fc41               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  57.9 KiB
 libpkgconf                        x86_64 2.3.0-1.fc42               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  78.2 KiB
 libpsl                            x86_64 0.21.5-4.fc41              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  80.5 KiB
 libpwquality                      x86_64 1.4.5-11.fc41              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 417.8 KiB
 libselinux                        x86_64 3.7-5.fc41                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 181.0 KiB
 libsemanage                       x86_64 3.7-2.fc41                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 293.5 KiB
 libsepol                          x86_64 3.7-2.fc41                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 817.8 KiB
 libsmartcols                      x86_64 2.40.2-8.fc42              copr_base                                                     180.4 KiB
 libssh                            x86_64 0.11.1-1.fc42              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 569.6 KiB
 libssh-config                     noarch 0.11.1-1.fc42              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 277.0   B
 libstdc++                         x86_64 14.2.1-1.fc42              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   2.8 MiB
 libtasn1                          x86_64 4.19.0-9.fc41              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 175.7 KiB
 libtirpc                          x86_64 1.3.5-0.fc41               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 202.7 KiB
 libtool-ltdl                      x86_64 2.4.7-12.fc41              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  66.2 KiB
 libunistring                      x86_64 1.1-8.fc41                 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   1.7 MiB
 libuuid                           x86_64 2.40.2-8.fc42              copr_base                                                      41.4 KiB
 libverto                          x86_64 0.3.2-9.fc41               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  29.5 KiB
 libxcrypt                         x86_64 4.4.36-7.fc41              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 266.8 KiB
 libxml2                           x86_64 2.12.8-2.fc41              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   1.7 MiB
 libzstd                           x86_64 1.5.6-2.fc41               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 795.9 KiB
 lua-libs                          x86_64 5.4.6-6.fc41               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 285.0 KiB
 lua-srpm-macros                   noarch 1-14.fc41                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   1.3 KiB
 lz4-libs                          x86_64 1.10.0-1.fc41              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 145.5 KiB
 mpfr                              x86_64 4.2.1-5.fc41               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 832.1 KiB
 ncurses-base                      noarch 6.5-2.20240629.fc41        http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 326.3 KiB
 ncurses-libs                      x86_64 6.5-2.20240629.fc41        http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 975.2 KiB
 ocaml-srpm-macros                 noarch 10-3.fc41                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   1.9 KiB
 openblas-srpm-macros              noarch 2-18.fc41                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 112.0   B
 openldap                          x86_64 2.6.8-5.fc41               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 644.2 KiB
 openssl-libs                      x86_64 1:3.2.2-5.fc41             http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   7.8 MiB
 p11-kit                           x86_64 0.25.5-3.fc41              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   2.2 MiB
 p11-kit-trust                     x86_64 0.25.5-3.fc41              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 391.4 KiB
 package-notes-srpm-macros         noarch 0.5-12.fc41                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   1.6 KiB
 pam                               x86_64 1.6.1-6.fc42               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   1.8 MiB
 pam-libs                          x86_64 1.6.1-6.fc42               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 139.0 KiB
 pcre2                             x86_64 10.44-1.fc41.1             http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 653.5 KiB
 pcre2-syntax                      noarch 10.44-1.fc41.1             http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 251.6 KiB
 perl-srpm-macros                  noarch 1-56.fc41                  http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 861.0   B
 pkgconf                           x86_64 2.3.0-1.fc42               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  88.6 KiB
 pkgconf-m4                        noarch 2.3.0-1.fc42               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  14.4 KiB
 pkgconf-pkg-config                x86_64 2.3.0-1.fc42               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 989.0   B
 popt                              x86_64 1.19-7.fc41                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 136.9 KiB
 publicsuffix-list-dafsa           noarch 20240107-4.fc41            http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  67.5 KiB
 pyproject-srpm-macros             noarch 1.14.0-1.fc41              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   1.9 KiB
 python-srpm-macros                noarch 3.13-3.fc41                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  51.0 KiB
 qt5-srpm-macros                   noarch 5.15.14-3.fc41             http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 500.0   B
 qt6-srpm-macros                   noarch 6.7.2-3.fc41               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 456.0   B
 readline                          x86_64 8.2-11.fc42                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 493.1 KiB
 rpm                               x86_64 4.19.93-1.fc42             copr_base                                                       3.1 MiB
 rpm-build-libs                    x86_64 4.19.93-1.fc42             copr_base                                                     206.7 KiB
 rpm-libs                          x86_64 4.19.93-1.fc42             copr_base                                                     721.9 KiB
 rpm-sequoia                       x86_64 1.7.0-2.fc41               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   2.4 MiB
 rust-srpm-macros                  noarch 26.3-3.fc42                copr_base                                                       4.8 KiB
 setup                             noarch 2.15.0-5.fc41              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 720.7 KiB
 sqlite-libs                       x86_64 3.46.0-4.fc41              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   1.4 MiB
 systemd-libs                      x86_64 256.5-1.fc42               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   2.0 MiB
 util-linux-core                   x86_64 2.40.2-8.fc42              copr_base                                                       1.5 MiB
 xxhash-libs                       x86_64 0.8.2-3.fc41               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  88.5 KiB
 xz-libs                           x86_64 1:5.6.2-2.fc41             http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 214.4 KiB
 zig-srpm-macros                   noarch 1-3.fc41                   http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   1.1 KiB
 zip                               x86_64 3.0-41.fc41                http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 703.2 KiB
 zlib-ng-compat                    x86_64 2.1.7-2.fc41               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 134.0 KiB
 zstd                              x86_64 1.5.6-2.fc41               http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   1.7 MiB
Installing groups:                                                                                                                          
 Buildsystem building group                                                                                                                 

Transaction Summary:
 Installing:      153 packages

Total size of inbound packages is 53 MiB. Need to download 53 MiB.
After this operation 180 MiB will be used (install 180 MiB, remove 0 B).
[  1/153] bzip2-0:1.0.8-19.fc41.x86_64  100% |   1.7 MiB/s |  52.5 KiB |  00m00s
[  2/153] bash-0:5.2.32-2.fc42.x86_64   100% |  44.7 MiB/s |   1.8 MiB |  00m00s
[  3/153] cpio-0:2.15-2.fc41.x86_64     100% |  25.3 MiB/s | 285.2 KiB |  00m00s
[  4/153] fedora-release-common-0:42-0. 100% |   4.5 MiB/s |  23.0 KiB |  00m00s
[  5/153] diffutils-0:3.10-8.fc41.x86_6 100% |  64.6 MiB/s | 397.2 KiB |  00m00s
[  6/153] coreutils-0:9.5-9.fc42.x86_64 100% |  20.9 MiB/s |   1.1 MiB |  00m00s
[  7/153] findutils-1:4.10.0-4.fc41.x86 100% |  75.3 MiB/s | 539.8 KiB |  00m00s
[  8/153] gawk-0:5.3.0-4.fc41.x86_64    100% |  96.3 MiB/s |   1.1 MiB |  00m00s
[  9/153] glibc-minimal-langpack-0:2.40 100% |  20.2 MiB/s | 124.0 KiB |  00m00s
[ 10/153] grep-0:3.11-9.fc41.x86_64     100% |  47.2 MiB/s | 289.7 KiB |  00m00s
[ 11/153] gzip-0:1.13-2.fc41.x86_64     100% |  26.7 MiB/s | 164.1 KiB |  00m00s
[ 12/153] info-0:7.1-3.fc41.x86_64      100% |  35.6 MiB/s | 182.5 KiB |  00m00s
[ 13/153] patch-0:2.7.6-25.fc41.x86_64  100% |  25.6 MiB/s | 131.0 KiB |  00m00s
[ 14/153] redhat-rpm-config-0:294-1.fc4 100% |  18.4 MiB/s |  75.5 KiB |  00m00s
[ 15/153] sed-0:4.9-3.fc41.x86_64       100% |  50.3 MiB/s | 309.3 KiB |  00m00s
[ 16/153] rpm-build-0:4.19.93-1.fc42.x8 100% |  10.6 MiB/s |  76.3 KiB |  00m00s
[ 17/153] unzip-0:6.0-64.fc41.x86_64    100% |  30.1 MiB/s | 184.9 KiB |  00m00s
[ 18/153] tar-2:1.35-4.fc41.x86_64      100% |  92.5 MiB/s | 852.1 KiB |  00m00s
[ 19/153] util-linux-0:2.40.2-8.fc42.x8 100% | 186.4 MiB/s |   1.1 MiB |  00m00s
[ 20/153] which-0:2.21-42.fc41.x86_64   100% |   8.1 MiB/s |  41.6 KiB |  00m00s
[ 21/153] shadow-utils-2:4.15.1-9.fc41. 100% |  60.1 MiB/s |   1.3 MiB |  00m00s
[ 22/153] xz-libs-1:5.6.2-2.fc41.x86_64 100% |  15.6 MiB/s | 111.8 KiB |  00m00s
[ 23/153] xz-1:5.6.2-2.fc41.x86_64      100% |  40.6 MiB/s | 457.8 KiB |  00m00s
[ 24/153] glibc-0:2.40-3.fc41.x86_64    100% | 131.3 MiB/s |   2.2 MiB |  00m00s
[ 25/153] bzip2-libs-0:1.0.8-19.fc41.x8 100% |   6.7 MiB/s |  41.1 KiB |  00m00s
[ 26/153] libacl-0:2.3.2-2.fc41.x86_64  100% |   4.8 MiB/s |  24.5 KiB |  00m00s
[ 27/153] audit-libs-0:4.0.2-1.fc41.x86 100% |  61.8 MiB/s | 126.7 KiB |  00m00s
[ 28/153] libattr-0:2.5.2-4.fc41.x86_64 100% |   4.4 MiB/s |  18.2 KiB |  00m00s
[ 29/153] libselinux-0:3.7-5.fc41.x86_6 100% |  21.4 MiB/s |  87.8 KiB |  00m00s
[ 30/153] libeconf-0:0.6.2-3.fc41.x86_6 100% |  10.5 MiB/s |  32.2 KiB |  00m00s
[ 31/153] libxcrypt-0:4.4.36-7.fc41.x86 100% |  28.9 MiB/s | 118.5 KiB |  00m00s
[ 32/153] libsemanage-0:3.7-2.fc41.x86_ 100% |  22.7 MiB/s | 116.3 KiB |  00m00s
[ 33/153] pam-libs-0:1.6.1-6.fc42.x86_6 100% |  14.0 MiB/s |  57.2 KiB |  00m00s
[ 34/153] setup-0:2.15.0-5.fc41.noarch  100% |  29.0 MiB/s | 148.3 KiB |  00m00s
[ 35/153] pam-0:1.6.1-6.fc42.x86_64     100% |  63.2 MiB/s | 518.0 KiB |  00m00s
[ 36/153] ansible-srpm-macros-0:1-16.fc 100% |   4.1 MiB/s |  20.8 KiB |  00m00s
[ 37/153] build-reproducibility-srpm-ma 100% |   2.6 MiB/s |  10.6 KiB |  00m00s
[ 38/153] glibc-gconv-extra-0:2.40-3.fc 100% | 127.2 MiB/s |   1.7 MiB |  00m00s
[ 39/153] dwz-0:0.15-7.fc41.x86_64      100% |  33.7 MiB/s | 138.0 KiB |  00m00s
[ 40/153] efi-srpm-macros-0:5-12.fc41.n 100% |   4.4 MiB/s |  22.4 KiB |  00m00s
[ 41/153] file-0:5.45-7.fc41.x86_64     100% |  12.0 MiB/s |  49.1 KiB |  00m00s
[ 42/153] fonts-srpm-macros-1:2.0.5-17. 100% |   6.6 MiB/s |  27.0 KiB |  00m00s
[ 43/153] forge-srpm-macros-0:0.3.2-1.f 100% |   6.4 MiB/s |  19.7 KiB |  00m00s
[ 44/153] fpc-srpm-macros-0:1.3-13.fc41 100% |   1.9 MiB/s |   8.0 KiB |  00m00s
[ 45/153] ghc-srpm-macros-0:1.9.1-2.fc4 100% |   2.9 MiB/s |   9.1 KiB |  00m00s
[ 46/153] gnat-srpm-macros-0:6-6.fc41.n 100% |   2.9 MiB/s |   9.0 KiB |  00m00s
[ 47/153] go-srpm-macros-0:3.6.0-3.fc41 100% |   9.1 MiB/s |  28.0 KiB |  00m00s
[ 48/153] kernel-srpm-macros-0:1.0-24.f 100% |   3.2 MiB/s |   9.9 KiB |  00m00s
[ 49/153] lua-srpm-macros-0:1-14.fc41.n 100% |   2.2 MiB/s |   8.9 KiB |  00m00s
[ 50/153] ocaml-srpm-macros-0:10-3.fc41 100% |   3.0 MiB/s |   9.2 KiB |  00m00s
[ 51/153] openblas-srpm-macros-0:2-18.f 100% |   2.5 MiB/s |   7.7 KiB |  00m00s
[ 52/153] package-notes-srpm-macros-0:0 100% |   3.2 MiB/s |   9.8 KiB |  00m00s
[ 53/153] perl-srpm-macros-0:1-56.fc41. 100% |   2.8 MiB/s |   8.5 KiB |  00m00s
[ 54/153] pyproject-srpm-macros-0:1.14. 100% |   3.3 MiB/s |  13.4 KiB |  00m00s
[ 55/153] python-srpm-macros-0:3.13-3.f 100% |   7.7 MiB/s |  23.7 KiB |  00m00s
[ 56/153] qt5-srpm-macros-0:5.15.14-3.f 100% |   2.9 MiB/s |   9.0 KiB |  00m00s
[ 57/153] qt6-srpm-macros-0:6.7.2-3.fc4 100% |   2.2 MiB/s |   9.1 KiB |  00m00s
[ 58/153] rpm-0:4.19.93-1.fc42.x86_64   100% | 170.2 MiB/s | 522.7 KiB |  00m00s
[ 59/153] rust-srpm-macros-0:26.3-3.fc4 100% |   6.2 MiB/s |  12.7 KiB |  00m00s
[ 60/153] zig-srpm-macros-0:1-3.fc41.no 100% |   2.6 MiB/s |   8.1 KiB |  00m00s
[ 61/153] ed-0:1.20.2-2.fc41.x86_64     100% |  16.0 MiB/s |  81.8 KiB |  00m00s
[ 62/153] zip-0:3.0-41.fc41.x86_64      100% |  36.9 MiB/s | 264.8 KiB |  00m00s
[ 63/153] authselect-0:1.5.0-7.fc41.x86 100% |  34.5 MiB/s | 141.2 KiB |  00m00s
[ 64/153] gdbm-1:1.23-7.fc41.x86_64     100% |  35.9 MiB/s | 147.2 KiB |  00m00s
[ 65/153] gdbm-libs-1:1.23-7.fc41.x86_6 100% |  18.3 MiB/s |  56.3 KiB |  00m00s
[ 66/153] libnsl2-0:2.0.1-2.fc41.x86_64 100% |   5.8 MiB/s |  29.6 KiB |  00m00s
[ 67/153] libpwquality-0:1.4.5-11.fc41. 100% |  21.1 MiB/s | 108.2 KiB |  00m00s
[ 68/153] libtirpc-0:1.3.5-0.fc41.x86_6 100% |  18.4 MiB/s |  94.2 KiB |  00m00s
[ 69/153] crypto-policies-0:20240828-1. 100% |  13.6 MiB/s |  69.9 KiB |  00m00s
[ 70/153] ca-certificates-0:2024.2.68_v 100% |  77.1 MiB/s | 868.2 KiB |  00m00s
[ 71/153] openssl-libs-1:3.2.2-5.fc41.x 100% | 135.9 MiB/s |   2.3 MiB |  00m00s
[ 72/153] zlib-ng-compat-0:2.1.7-2.fc41 100% |   9.5 MiB/s |  77.8 KiB |  00m00s
[ 73/153] libcom_err-0:1.47.1-3.fc41.x8 100% |   6.4 MiB/s |  26.4 KiB |  00m00s
[ 74/153] libsepol-0:3.7-2.fc41.x86_64  100% |  55.7 MiB/s | 342.2 KiB |  00m00s
[ 75/153] krb5-libs-0:1.21.3-2.fc41.x86 100% |  81.7 MiB/s | 753.3 KiB |  00m00s
[ 76/153] pcre2-0:10.44-1.fc41.1.x86_64 100% |  47.5 MiB/s | 243.1 KiB |  00m00s
[ 77/153] cracklib-0:2.9.11-6.fc41.x86_ 100% |  19.9 MiB/s |  81.7 KiB |  00m00s
[ 78/153] keyutils-libs-0:1.6.3-4.fc41. 100% |   7.7 MiB/s |  31.6 KiB |  00m00s
[ 79/153] libverto-0:0.3.2-9.fc41.x86_6 100% |   6.7 MiB/s |  20.7 KiB |  00m00s
[ 80/153] glibc-common-0:2.40-3.fc41.x8 100% |  66.3 MiB/s | 407.6 KiB |  00m00s
[ 81/153] basesystem-0:11-21.fc41.noarc 100% |   1.8 MiB/s |   7.4 KiB |  00m00s
[ 82/153] ncurses-libs-0:6.5-2.20240629 100% |  40.8 MiB/s | 334.0 KiB |  00m00s
[ 83/153] libgcc-0:14.2.1-1.fc42.x86_64 100% |  32.3 MiB/s | 132.3 KiB |  00m00s
[ 84/153] readline-0:8.2-11.fc42.x86_64 100% |  29.8 MiB/s | 213.4 KiB |  00m00s
[ 85/153] filesystem-0:3.18-23.fc41.x86 100% | 107.0 MiB/s |   1.1 MiB |  00m00s
[ 86/153] gmp-1:6.3.0-2.fc41.x86_64     100% |  34.5 MiB/s | 318.0 KiB |  00m00s
[ 87/153] mpfr-0:4.2.1-5.fc41.x86_64    100% |  56.4 MiB/s | 346.3 KiB |  00m00s
[ 88/153] fedora-repos-0:42-0.1.noarch  100% |   3.0 MiB/s |   9.2 KiB |  00m00s
[ 89/153] file-libs-0:5.45-7.fc41.x86_6 100% |  93.0 MiB/s | 762.0 KiB |  00m00s
[ 90/153] elfutils-libelf-0:0.191-8.fc4 100% |  33.8 MiB/s | 207.6 KiB |  00m00s
[ 91/153] libcap-0:2.70-4.fc41.x86_64   100% |  16.9 MiB/s |  86.7 KiB |  00m00s
[ 92/153] systemd-libs-0:256.5-1.fc42.x 100% |  89.2 MiB/s | 730.4 KiB |  00m00s
[ 93/153] coreutils-common-0:9.5-9.fc42 100% | 139.8 MiB/s |   2.1 MiB |  00m00s
[ 94/153] p11-kit-0:0.25.5-3.fc41.x86_6 100% |  66.6 MiB/s | 477.3 KiB |  00m00s
[ 95/153] p11-kit-trust-0:0.25.5-3.fc41 100% |  25.8 MiB/s | 132.1 KiB |  00m00s
[ 96/153] popt-0:1.19-7.fc41.x86_64     100% |  11.6 MiB/s |  59.3 KiB |  00m00s
[ 97/153] authselect-libs-0:1.5.0-7.fc4 100% |  33.3 MiB/s | 204.9 KiB |  00m00s
[ 98/153] add-determinism-0:0.3.6-1.fc4 100% | 104.0 MiB/s | 851.8 KiB |  00m00s
[ 99/153] libblkid-0:2.40.2-8.fc42.x86_ 100% |  61.3 MiB/s | 125.5 KiB |  00m00s
[100/153] libcap-ng-0:0.8.5-3.fc41.x86_ 100% |   7.9 MiB/s |  32.6 KiB |  00m00s
[101/153] libfdisk-0:2.40.2-8.fc42.x86_ 100% |  52.1 MiB/s | 160.1 KiB |  00m00s
[102/153] libmount-0:2.40.2-8.fc42.x86_ 100% |  30.6 MiB/s | 156.6 KiB |  00m00s
[103/153] libsmartcols-0:2.40.2-8.fc42. 100% |  20.6 MiB/s |  84.4 KiB |  00m00s
[104/153] libuuid-0:2.40.2-8.fc42.x86_6 100% |   9.6 MiB/s |  29.5 KiB |  00m00s
[105/153] util-linux-core-0:2.40.2-8.fc 100% | 127.5 MiB/s | 522.0 KiB |  00m00s
[106/153] debugedit-0:5.0-17.fc41.x86_6 100% |  19.6 MiB/s |  80.1 KiB |  00m00s
[107/153] elfutils-0:0.191-8.fc41.x86_6 100% |  51.2 MiB/s | 524.4 KiB |  00m00s
[108/153] libarchive-0:3.7.4-3.fc41.x86 100% |  50.0 MiB/s | 409.2 KiB |  00m00s
[109/153] rpm-build-libs-0:4.19.93-1.fc 100% |  48.7 MiB/s |  99.7 KiB |  00m00s
[110/153] pkgconf-pkg-config-0:2.3.0-1. 100% |   2.4 MiB/s |  10.0 KiB |  00m00s
[111/153] rpm-libs-0:4.19.93-1.fc42.x86 100% | 151.4 MiB/s | 310.1 KiB |  00m00s
[112/153] binutils-0:2.43.1-1.fc42.x86_ 100% | 229.4 MiB/s |   6.4 MiB |  00m00s
[113/153] zstd-0:1.5.6-2.fc41.x86_64    100% |  47.0 MiB/s | 481.5 KiB |  00m00s
[114/153] curl-0:8.9.1-3.fc42.x86_64    100% |  25.7 MiB/s | 315.3 KiB |  00m00s
[115/153] lz4-libs-0:1.10.0-1.fc41.x86_ 100% |  11.5 MiB/s |  70.7 KiB |  00m00s
[116/153] libstdc++-0:14.2.1-1.fc42.x86 100% | 108.2 MiB/s | 886.7 KiB |  00m00s
[117/153] pkgconf-0:2.3.0-1.fc42.x86_64 100% |  11.0 MiB/s |  45.2 KiB |  00m00s
[118/153] pkgconf-m4-0:2.3.0-1.fc42.noa 100% |   4.7 MiB/s |  14.3 KiB |  00m00s
[119/153] libpkgconf-0:2.3.0-1.fc42.x86 100% |   9.4 MiB/s |  38.5 KiB |  00m00s
[120/153] pcre2-syntax-0:10.44-1.fc41.1 100% |  29.3 MiB/s | 149.9 KiB |  00m00s
[121/153] alternatives-0:1.30-1.fc41.x8 100% |  10.4 MiB/s |  42.5 KiB |  00m00s
[122/153] libtasn1-0:4.19.0-9.fc41.x86_ 100% |  18.1 MiB/s |  74.2 KiB |  00m00s
[123/153] libffi-0:3.4.6-3.fc42.x86_64  100% |   9.8 MiB/s |  40.0 KiB |  00m00s
[124/153] ncurses-base-0:6.5-2.20240629 100% |  12.5 MiB/s |  63.8 KiB |  00m00s
[125/153] libxml2-0:2.12.8-2.fc41.x86_6 100% |  83.9 MiB/s | 687.3 KiB |  00m00s
[126/153] libzstd-0:1.5.6-2.fc41.x86_64 100% |  43.3 MiB/s | 310.3 KiB |  00m00s
[127/153] fedora-gpg-keys-0:42-0.1.noar 100% |  24.1 MiB/s | 123.3 KiB |  00m00s
[128/153] fedora-repos-rawhide-0:42-0.1 100% |   2.8 MiB/s |   8.7 KiB |  00m00s
[129/153] elfutils-debuginfod-client-0: 100% |   7.3 MiB/s |  37.2 KiB |  00m00s
[130/153] elfutils-libs-0:0.191-8.fc41. 100% |  50.3 MiB/s | 257.5 KiB |  00m00s
[131/153] jansson-0:2.13.1-10.fc41.x86_ 100% |  10.8 MiB/s |  44.4 KiB |  00m00s
[132/153] lua-libs-0:5.4.6-6.fc41.x86_6 100% |  32.2 MiB/s | 132.0 KiB |  00m00s
[133/153] rpm-sequoia-0:1.7.0-2.fc41.x8 100% |  87.2 MiB/s | 892.5 KiB |  00m00s
[134/153] sqlite-libs-0:3.46.0-4.fc41.x 100% |  77.3 MiB/s | 712.4 KiB |  00m00s
[135/153] libgomp-0:14.2.1-1.fc42.x86_6 100% |  49.2 MiB/s | 353.0 KiB |  00m00s
[136/153] elfutils-default-yama-scope-0 100% |   4.0 MiB/s |  12.3 KiB |  00m00s
[137/153] fedora-release-0:42-0.3.noarc 100% |   3.0 MiB/s |  12.2 KiB |  00m00s
[138/153] fedora-release-identity-basic 100% |   3.2 MiB/s |  13.0 KiB |  00m00s
[139/153] libcurl-0:8.9.1-3.fc42.x86_64 100% |  58.9 MiB/s | 362.0 KiB |  00m00s
[140/153] xxhash-libs-0:0.8.2-3.fc41.x8 100% |   7.2 MiB/s |  37.1 KiB |  00m00s
[141/153] libbrotli-0:1.1.0-5.fc41.x86_ 100% |  55.4 MiB/s | 340.5 KiB |  00m00s
[142/153] libidn2-0:2.3.7-2.fc41.x86_64 100% |  18.3 MiB/s | 112.6 KiB |  00m00s
[143/153] gdb-minimal-0:15.1-1.fc42.x86 100% | 215.7 MiB/s |   4.3 MiB |  00m00s
[144/153] libnghttp2-0:1.63.0-1.fc42.x8 100% |   9.4 MiB/s |  76.7 KiB |  00m00s
[145/153] libpsl-0:0.21.5-4.fc41.x86_64 100% |   7.8 MiB/s |  64.1 KiB |  00m00s
[146/153] libssh-0:0.11.1-1.fc42.x86_64 100% |  45.3 MiB/s | 231.9 KiB |  00m00s
[147/153] openldap-0:2.6.8-5.fc41.x86_6 100% |  35.7 MiB/s | 255.6 KiB |  00m00s
[148/153] cyrus-sasl-lib-0:2.1.28-27.fc 100% |  97.0 MiB/s | 794.9 KiB |  00m00s
[149/153] libevent-0:2.1.12-14.fc41.x86 100% |  50.3 MiB/s | 257.5 KiB |  00m00s
[150/153] libtool-ltdl-0:2.4.7-12.fc41. 100% |   8.7 MiB/s |  35.6 KiB |  00m00s
[151/153] libssh-config-0:0.11.1-1.fc42 100% |   2.3 MiB/s |   9.4 KiB |  00m00s
[152/153] libunistring-0:1.1-8.fc41.x86 100% |  88.7 MiB/s | 544.8 KiB |  00m00s
[153/153] publicsuffix-list-dafsa-0:202 100% |   9.5 MiB/s |  58.3 KiB |  00m00s
--------------------------------------------------------------------------------
[153/153] Total                         100% | 138.9 MiB/s |  52.6 MiB |  00m00s
Running transaction
[  1/155] Verify package files          100% | 869.0   B/s | 153.0   B |  00m00s
>>> Running pre-transaction scriptlet: filesystem-0:3.18-23.fc41.x86_64
>>> Stop pre-transaction scriptlet: filesystem-0:3.18-23.fc41.x86_64
[  2/155] Prepare transaction           100% |   4.0 KiB/s | 153.0   B |  00m00s
[  3/155] Installing libgcc-0:14.2.1-1. 100% | 269.8 MiB/s | 276.3 KiB |  00m00s
>>> Running post-install scriptlet: libgcc-0:14.2.1-1.fc42.x86_64
>>> Stop post-install scriptlet: libgcc-0:14.2.1-1.fc42.x86_64
[  4/155] Installing fedora-release-ide 100% |   0.0   B/s | 952.0   B |  00m00s
[  5/155] Installing fedora-gpg-keys-0: 100% |  56.1 MiB/s | 172.2 KiB |  00m00s
[  6/155] Installing fedora-repos-rawhi 100% |   0.0   B/s |   2.4 KiB |  00m00s
[  7/155] Installing fedora-repos-0:42- 100% |   0.0   B/s |   5.7 KiB |  00m00s
[  8/155] Installing fedora-release-com 100% |  23.1 MiB/s |  23.7 KiB |  00m00s
[  9/155] Installing fedora-release-0:4 100% |   0.0   B/s | 124.0   B |  00m00s
[ 10/155] Installing setup-0:2.15.0-5.f 100% |  64.5 MiB/s | 726.1 KiB |  00m00s
>>> Running post-install scriptlet: setup-0:2.15.0-5.fc41.noarch
>>> Stop post-install scriptlet: setup-0:2.15.0-5.fc41.noarch
[ 11/155] Installing filesystem-0:3.18- 100% |   3.2 MiB/s | 212.5 KiB |  00m00s
[ 12/155] Installing basesystem-0:11-21 100% |   0.0   B/s | 124.0   B |  00m00s
[ 13/155] Installing publicsuffix-list- 100% |   0.0   B/s |  68.3 KiB |  00m00s
[ 14/155] Installing libssh-config-0:0. 100% |   0.0   B/s | 816.0   B |  00m00s
[ 15/155] Installing ncurses-base-0:6.5 100% |  85.9 MiB/s | 351.7 KiB |  00m00s
[ 16/155] Installing glibc-minimal-lang 100% |   0.0   B/s | 124.0   B |  00m00s
[ 17/155] Installing ncurses-libs-0:6.5 100% | 239.7 MiB/s | 981.8 KiB |  00m00s
>>> Running pre-install scriptlet: glibc-0:2.40-3.fc41.x86_64
>>> Stop pre-install scriptlet: glibc-0:2.40-3.fc41.x86_64
[ 18/155] Installing glibc-0:2.40-3.fc4 100% | 222.6 MiB/s |   6.7 MiB |  00m00s
>>> Running post-install scriptlet: glibc-0:2.40-3.fc41.x86_64
>>> Stop post-install scriptlet: glibc-0:2.40-3.fc41.x86_64
[ 19/155] Installing bash-0:5.2.32-2.fc 100% | 389.0 MiB/s |   8.2 MiB |  00m00s
>>> Running post-install scriptlet: bash-0:5.2.32-2.fc42.x86_64
>>> Stop post-install scriptlet: bash-0:5.2.32-2.fc42.x86_64
[ 20/155] Installing glibc-common-0:2.4 100% | 209.4 MiB/s |   1.0 MiB |  00m00s
[ 21/155] Installing glibc-gconv-extra- 100% | 238.2 MiB/s |   8.1 MiB |  00m00s
>>> Running post-install scriptlet: glibc-gconv-extra-0:2.40-3.fc41.x86_64
>>> Stop post-install scriptlet: glibc-gconv-extra-0:2.40-3.fc41.x86_64
[ 22/155] Installing zlib-ng-compat-0:2 100% | 131.7 MiB/s | 134.8 KiB |  00m00s
[ 23/155] Installing xz-libs-1:5.6.2-2. 100% | 210.4 MiB/s | 215.5 KiB |  00m00s
[ 24/155] Installing bzip2-libs-0:1.0.8 100% |   0.0   B/s |  81.8 KiB |  00m00s
[ 25/155] Installing readline-0:8.2-11. 100% | 241.8 MiB/s | 495.3 KiB |  00m00s
[ 26/155] Installing popt-0:1.19-7.fc41 100% |  70.1 MiB/s | 143.5 KiB |  00m00s
[ 27/155] Installing libuuid-0:2.40.2-8 100% |   0.0   B/s |  42.5 KiB |  00m00s
[ 28/155] Installing libblkid-0:2.40.2- 100% | 257.5 MiB/s | 263.6 KiB |  00m00s
[ 29/155] Installing libattr-0:2.5.2-4. 100% |   0.0   B/s |  29.5 KiB |  00m00s
[ 30/155] Installing libacl-0:2.3.2-2.f 100% |   0.0   B/s |  40.7 KiB |  00m00s
[ 31/155] Installing libxcrypt-0:4.4.36 100% | 263.2 MiB/s | 269.5 KiB |  00m00s
[ 32/155] Installing gmp-1:6.3.0-2.fc41 100% | 397.3 MiB/s | 813.7 KiB |  00m00s
[ 33/155] Installing libstdc++-0:14.2.1 100% | 346.3 MiB/s |   2.8 MiB |  00m00s
[ 34/155] Installing libzstd-0:1.5.6-2. 100% | 389.3 MiB/s | 797.2 KiB |  00m00s
[ 35/155] Installing elfutils-libelf-0: 100% | 129.9 MiB/s |   1.2 MiB |  00m00s
>>> Running pre-install scriptlet: crypto-policies-0:20240828-1.git5f66e81.fc42.
>>> Stop pre-install scriptlet: crypto-policies-0:20240828-1.git5f66e81.fc42.noa
[ 36/155] Installing crypto-policies-0: 100% |  31.9 MiB/s | 163.2 KiB |  00m00s
>>> Running post-install scriptlet: crypto-policies-0:20240828-1.git5f66e81.fc42
>>> Stop post-install scriptlet: crypto-policies-0:20240828-1.git5f66e81.fc42.no
[ 37/155] Installing libeconf-0:0.6.2-3 100% |   0.0   B/s |  59.7 KiB |  00m00s
[ 38/155] Installing gdbm-libs-1:1.23-7 100% | 120.7 MiB/s | 123.6 KiB |  00m00s
[ 39/155] Installing dwz-0:0.15-7.fc41. 100% | 285.5 MiB/s | 292.3 KiB |  00m00s
[ 40/155] Installing mpfr-0:4.2.1-5.fc4 100% | 271.4 MiB/s | 833.7 KiB |  00m00s
[ 41/155] Installing gawk-0:5.3.0-4.fc4 100% | 288.7 MiB/s |   1.7 MiB |  00m00s
[ 42/155] Installing unzip-0:6.0-64.fc4 100% | 381.1 MiB/s | 390.3 KiB |  00m00s
[ 43/155] Installing file-libs-0:5.45-7 100% | 662.3 MiB/s |   9.9 MiB |  00m00s
[ 44/155] Installing file-0:5.45-7.fc41 100% | 102.6 MiB/s | 105.0 KiB |  00m00s
[ 45/155] Installing libcom_err-0:1.47. 100% |   0.0   B/s |  68.3 KiB |  00m00s
[ 46/155] Installing libsepol-0:3.7-2.f 100% | 399.8 MiB/s | 818.8 KiB |  00m00s
[ 47/155] Installing libcap-ng-0:0.8.5- 100% |   0.0   B/s |  71.0 KiB |  00m00s
[ 48/155] Installing audit-libs-0:4.0.2 100% | 325.6 MiB/s | 333.4 KiB |  00m00s
[ 49/155] Installing pam-libs-0:1.6.1-6 100% | 138.0 MiB/s | 141.3 KiB |  00m00s
[ 50/155] Installing libcap-0:2.70-4.fc 100% | 220.0 MiB/s | 225.2 KiB |  00m00s
[ 51/155] Installing systemd-libs-0:256 100% | 338.9 MiB/s |   2.0 MiB |  00m00s
[ 52/155] Installing libsmartcols-0:2.4 100% | 177.1 MiB/s | 181.4 KiB |  00m00s
[ 53/155] Installing lz4-libs-0:1.10.0- 100% | 143.1 MiB/s | 146.6 KiB |  00m00s
[ 54/155] Installing alternatives-0:1.3 100% |  66.3 MiB/s |  67.9 KiB |  00m00s
[ 55/155] Installing libtasn1-0:4.19.0- 100% | 173.3 MiB/s | 177.5 KiB |  00m00s
[ 56/155] Installing lua-libs-0:5.4.6-6 100% | 279.5 MiB/s | 286.2 KiB |  00m00s
[ 57/155] Installing libunistring-0:1.1 100% | 346.1 MiB/s |   1.7 MiB |  00m00s
[ 58/155] Installing libidn2-0:2.3.7-2. 100% | 163.6 MiB/s | 335.1 KiB |  00m00s
[ 59/155] Installing libpsl-0:0.21.5-4. 100% |   0.0   B/s |  81.7 KiB |  00m00s
[ 60/155] Installing zstd-0:1.5.6-2.fc4 100% | 422.9 MiB/s |   1.7 MiB |  00m00s
[ 61/155] Installing zip-0:3.0-41.fc41. 100% | 345.2 MiB/s | 707.1 KiB |  00m00s
[ 62/155] Installing gdbm-1:1.23-7.fc41 100% | 151.6 MiB/s | 465.8 KiB |  00m00s
[ 63/155] Installing cyrus-sasl-lib-0:2 100% | 384.3 MiB/s |   2.3 MiB |  00m00s
[ 64/155] Installing libfdisk-0:2.40.2- 100% | 355.5 MiB/s | 364.0 KiB |  00m00s
[ 65/155] Installing bzip2-0:1.0.8-19.f 100% |  97.8 MiB/s | 100.2 KiB |  00m00s
[ 66/155] Installing libxml2-0:2.12.8-2 100% | 342.4 MiB/s |   1.7 MiB |  00m00s
[ 67/155] Installing add-determinism-0: 100% | 374.3 MiB/s |   2.2 MiB |  00m00s
[ 68/155] Installing build-reproducibil 100% |   0.0   B/s |   1.0 KiB |  00m00s
[ 69/155] Installing sqlite-libs-0:3.46 100% | 357.3 MiB/s |   1.4 MiB |  00m00s
[ 70/155] Installing ed-0:1.20.2-2.fc41 100% | 145.7 MiB/s | 149.2 KiB |  00m00s
[ 71/155] Installing elfutils-default-y 100% | 340.5 KiB/s |   2.0 KiB |  00m00s
>>> Running post-install scriptlet: elfutils-default-yama-scope-0:0.191-8.fc41.n
>>> Stop post-install scriptlet: elfutils-default-yama-scope-0:0.191-8.fc41.noar
[ 72/155] Installing cpio-0:2.15-2.fc41 100% | 274.9 MiB/s |   1.1 MiB |  00m00s
[ 73/155] Installing diffutils-0:3.10-8 100% | 318.1 MiB/s |   1.6 MiB |  00m00s
[ 74/155] Installing keyutils-libs-0:1. 100% |   0.0   B/s |  55.8 KiB |  00m00s
[ 75/155] Installing libverto-0:0.3.2-9 100% |   0.0   B/s |  31.3 KiB |  00m00s
[ 76/155] Installing libpkgconf-0:2.3.0 100% |   0.0   B/s |  79.3 KiB |  00m00s
[ 77/155] Installing pkgconf-0:2.3.0-1. 100% |  89.0 MiB/s |  91.1 KiB |  00m00s
[ 78/155] Installing libffi-0:3.4.6-3.f 100% |  85.7 MiB/s |  87.8 KiB |  00m00s
[ 79/155] Installing p11-kit-0:0.25.5-3 100% | 275.9 MiB/s |   2.2 MiB |  00m00s
[ 80/155] Installing p11-kit-trust-0:0. 100% |  48.0 MiB/s | 393.1 KiB |  00m00s
>>> Running post-install scriptlet: p11-kit-trust-0:0.25.5-3.fc41.x86_64
>>> Stop post-install scriptlet: p11-kit-trust-0:0.25.5-3.fc41.x86_64
[ 81/155] Installing jansson-0:2.13.1-1 100% |  87.6 MiB/s |  89.7 KiB |  00m00s
[ 82/155] Installing libgomp-0:14.2.1-1 100% | 256.2 MiB/s | 524.8 KiB |  00m00s
[ 83/155] Installing xxhash-libs-0:0.8. 100% |  87.8 MiB/s |  89.9 KiB |  00m00s
[ 84/155] Installing libbrotli-0:1.1.0- 100% | 273.4 MiB/s | 839.9 KiB |  00m00s
[ 85/155] Installing libnghttp2-0:1.63. 100% | 167.2 MiB/s | 171.2 KiB |  00m00s
[ 86/155] Installing libtool-ltdl-0:2.4 100% |   0.0   B/s |  67.3 KiB |  00m00s
[ 87/155] Installing pcre2-syntax-0:10. 100% | 248.1 MiB/s | 254.1 KiB |  00m00s
[ 88/155] Installing pcre2-0:10.44-1.fc 100% | 319.8 MiB/s | 654.9 KiB |  00m00s
[ 89/155] Installing libselinux-0:3.7-5 100% | 178.0 MiB/s | 182.3 KiB |  00m00s
[ 90/155] Installing sed-0:4.9-3.fc41.x 100% | 212.3 MiB/s | 869.7 KiB |  00m00s
[ 91/155] Installing grep-0:3.11-9.fc41 100% | 200.7 MiB/s |   1.0 MiB |  00m00s
[ 92/155] Installing findutils-1:4.10.0 100% | 309.7 MiB/s |   1.9 MiB |  00m00s
[ 93/155] Installing xz-1:5.6.2-2.fc41. 100% | 241.0 MiB/s |   1.2 MiB |  00m00s
[ 94/155] Installing libmount-0:2.40.2- 100% | 174.3 MiB/s | 356.9 KiB |  00m00s
[ 95/155] Installing util-linux-core-0: 100% | 254.6 MiB/s |   1.5 MiB |  00m00s
[ 96/155] Installing patch-0:2.7.6-25.f 100% | 261.9 MiB/s | 268.2 KiB |  00m00s
[ 97/155] Installing tar-2:1.35-4.fc41. 100% | 328.7 MiB/s |   3.0 MiB |  00m00s
[ 98/155] Installing libsemanage-0:3.7- 100% | 144.2 MiB/s | 295.2 KiB |  00m00s
[ 99/155] Installing shadow-utils-2:4.1 100% | 233.0 MiB/s |   4.2 MiB |  00m00s
[100/155] Installing pkgconf-m4-0:2.3.0 100% |   0.0   B/s |  14.8 KiB |  00m00s
[101/155] Installing pkgconf-pkg-config 100% |   0.0   B/s |   1.8 KiB |  00m00s
[102/155] Installing coreutils-common-0 100% | 385.9 MiB/s |  11.2 MiB |  00m00s
[103/155] Installing openssl-libs-1:3.2 100% | 411.9 MiB/s |   7.8 MiB |  00m00s
[104/155] Installing coreutils-0:9.5-9. 100% | 272.3 MiB/s |   5.7 MiB |  00m00s
>>> Running pre-install scriptlet: ca-certificates-0:2024.2.68_v8.0.302-3.fc41.n
>>> Stop pre-install scriptlet: ca-certificates-0:2024.2.68_v8.0.302-3.fc41.noar
[105/155] Installing ca-certificates-0: 100% |   3.8 MiB/s |   2.4 MiB |  00m01s
>>> Running post-install scriptlet: ca-certificates-0:2024.2.68_v8.0.302-3.fc41.
>>> Stop post-install scriptlet: ca-certificates-0:2024.2.68_v8.0.302-3.fc41.noa
[106/155] Installing krb5-libs-0:1.21.3 100% | 287.4 MiB/s |   2.3 MiB |  00m00s
[107/155] Installing libarchive-0:3.7.4 100% | 301.0 MiB/s | 924.6 KiB |  00m00s
[108/155] Installing libtirpc-0:1.3.5-0 100% | 199.7 MiB/s | 204.5 KiB |  00m00s
[109/155] Installing gzip-0:1.13-2.fc41 100% | 192.7 MiB/s | 394.6 KiB |  00m00s
[110/155] Installing authselect-libs-0: 100% | 162.7 MiB/s | 833.2 KiB |  00m00s
[111/155] Installing cracklib-0:2.9.11- 100% |  81.5 MiB/s | 250.3 KiB |  00m00s
[112/155] Installing libpwquality-0:1.4 100% | 105.0 MiB/s | 430.1 KiB |  00m00s
[113/155] Installing libnsl2-0:2.0.1-2. 100% |  57.7 MiB/s |  59.1 KiB |  00m00s
[114/155] Installing pam-0:1.6.1-6.fc42 100% | 156.5 MiB/s |   1.9 MiB |  00m00s
[115/155] Installing libssh-0:0.11.1-1. 100% | 279.2 MiB/s | 571.7 KiB |  00m00s
[116/155] Installing rpm-sequoia-0:1.7. 100% | 338.2 MiB/s |   2.4 MiB |  00m00s
[117/155] Installing rpm-libs-0:4.19.93 100% | 353.2 MiB/s | 723.4 KiB |  00m00s
[118/155] Installing libevent-0:2.1.12- 100% | 292.8 MiB/s | 899.5 KiB |  00m00s
[119/155] Installing openldap-0:2.6.8-5 100% | 316.4 MiB/s | 648.0 KiB |  00m00s
[120/155] Installing libcurl-0:8.9.1-3. 100% | 266.7 MiB/s | 819.2 KiB |  00m00s
[121/155] Installing elfutils-debuginfo 100% |  65.3 MiB/s |  66.9 KiB |  00m00s
[122/155] Installing elfutils-libs-0:0. 100% | 316.4 MiB/s | 648.0 KiB |  00m00s
[123/155] Installing elfutils-0:0.191-8 100% | 365.7 MiB/s |   2.6 MiB |  00m00s
[124/155] Installing binutils-0:2.43.1- 100% | 372.1 MiB/s |  27.5 MiB |  00m00s
>>> Running post-install scriptlet: binutils-0:2.43.1-1.fc42.x86_64
>>> Stop post-install scriptlet: binutils-0:2.43.1-1.fc42.x86_64
[125/155] Installing gdb-minimal-0:15.1 100% | 382.1 MiB/s |  13.0 MiB |  00m00s
[126/155] Installing debugedit-0:5.0-17 100% | 197.3 MiB/s | 202.0 KiB |  00m00s
[127/155] Installing rpm-build-libs-0:4 100% | 202.6 MiB/s | 207.5 KiB |  00m00s
[128/155] Installing curl-0:8.9.1-3.fc4 100% |  70.9 MiB/s | 798.6 KiB |  00m00s
>>> Running pre-install scriptlet: rpm-0:4.19.93-1.fc42.x86_64
>>> Stop pre-install scriptlet: rpm-0:4.19.93-1.fc42.x86_64
[129/155] Installing rpm-0:4.19.93-1.fc 100% | 166.7 MiB/s |   2.5 MiB |  00m00s
[130/155] Installing efi-srpm-macros-0: 100% |   0.0   B/s |  41.2 KiB |  00m00s
[131/155] Installing lua-srpm-macros-0: 100% |   0.0   B/s |   1.9 KiB |  00m00s
[132/155] Installing zig-srpm-macros-0: 100% |   0.0   B/s |   1.7 KiB |  00m00s
[133/155] Installing rust-srpm-macros-0 100% |   0.0   B/s |   5.6 KiB |  00m00s
[134/155] Installing qt6-srpm-macros-0: 100% |   0.0   B/s | 732.0   B |  00m00s
[135/155] Installing qt5-srpm-macros-0: 100% |   0.0   B/s | 776.0   B |  00m00s
[136/155] Installing perl-srpm-macros-0 100% |   0.0   B/s |   1.1 KiB |  00m00s
[137/155] Installing package-notes-srpm 100% |   0.0   B/s |   2.0 KiB |  00m00s
[138/155] Installing openblas-srpm-macr 100% |   0.0   B/s | 392.0   B |  00m00s
[139/155] Installing ocaml-srpm-macros- 100% |   0.0   B/s |   2.2 KiB |  00m00s
[140/155] Installing kernel-srpm-macros 100% |   0.0   B/s |   2.3 KiB |  00m00s
[141/155] Installing gnat-srpm-macros-0 100% |   0.0   B/s |   1.3 KiB |  00m00s
[142/155] Installing ghc-srpm-macros-0: 100% |   0.0   B/s |   1.0 KiB |  00m00s
[143/155] Installing fpc-srpm-macros-0: 100% |   0.0   B/s | 420.0   B |  00m00s
[144/155] Installing ansible-srpm-macro 100% |   0.0   B/s |  36.2 KiB |  00m00s
[145/155] Installing fonts-srpm-macros- 100% |   0.0   B/s |  57.0 KiB |  00m00s
[146/155] Installing forge-srpm-macros- 100% |   0.0   B/s |  40.4 KiB |  00m00s
[147/155] Installing go-srpm-macros-0:3 100% |   0.0   B/s |  62.0 KiB |  00m00s
[148/155] Installing python-srpm-macros 100% |   0.0   B/s |  52.2 KiB |  00m00s
[149/155] Installing redhat-rpm-config- 100% | 188.4 MiB/s | 192.9 KiB |  00m00s
[150/155] Installing rpm-build-0:4.19.9 100% |  99.0 MiB/s | 202.8 KiB |  00m00s
[151/155] Installing pyproject-srpm-mac 100% |   2.4 MiB/s |   2.5 KiB |  00m00s
[152/155] Installing util-linux-0:2.40. 100% | 168.9 MiB/s |   3.7 MiB |  00m00s
>>> Running post-install scriptlet: util-linux-0:2.40.2-8.fc42.x86_64
>>> Stop post-install scriptlet: util-linux-0:2.40.2-8.fc42.x86_64
[153/155] Installing authselect-0:1.5.0 100% |  77.1 MiB/s | 157.9 KiB |  00m00s
[154/155] Installing which-0:2.21-42.fc 100% |  80.5 MiB/s |  82.4 KiB |  00m00s
[155/155] Installing info-0:7.1-3.fc41. 100% | 367.0 KiB/s | 362.2 KiB |  00m01s
>>> Running post-transaction scriptlet: filesystem-0:3.18-23.fc41.x86_64
>>> Stop post-transaction scriptlet: filesystem-0:3.18-23.fc41.x86_64
>>> Running post-transaction scriptlet: ca-certificates-0:2024.2.68_v8.0.302-3.f
>>> Stop post-transaction scriptlet: ca-certificates-0:2024.2.68_v8.0.302-3.fc41
>>> Running post-transaction scriptlet: authselect-libs-0:1.5.0-7.fc41.x86_64
>>> Stop post-transaction scriptlet: authselect-libs-0:1.5.0-7.fc41.x86_64
>>> Running post-transaction scriptlet: rpm-0:4.19.93-1.fc42.x86_64
>>> Stop post-transaction scriptlet: rpm-0:4.19.93-1.fc42.x86_64
>>> Running trigger-install scriptlet: glibc-common-0:2.40-3.fc41.x86_64
>>> Stop trigger-install scriptlet: glibc-common-0:2.40-3.fc41.x86_64
>>> Running trigger-install scriptlet: info-0:7.1-3.fc41.x86_64
>>> Stop trigger-install scriptlet: info-0:7.1-3.fc41.x86_64
Warning: skipped PGP checks for 153 package(s).
Finish: installing minimal buildroot with dnf5
Start: creating root cache
Finish: creating root cache
Finish: chroot init
INFO: Installed packages:
INFO: add-determinism-0.3.6-1.fc41.x86_64
alternatives-1.30-1.fc41.x86_64
ansible-srpm-macros-1-16.fc41.noarch
audit-libs-4.0.2-1.fc41.x86_64
authselect-1.5.0-7.fc41.x86_64
authselect-libs-1.5.0-7.fc41.x86_64
basesystem-11-21.fc41.noarch
bash-5.2.32-2.fc42.x86_64
binutils-2.43.1-1.fc42.x86_64
build-reproducibility-srpm-macros-0.3.6-1.fc41.noarch
bzip2-1.0.8-19.fc41.x86_64
bzip2-libs-1.0.8-19.fc41.x86_64
ca-certificates-2024.2.68_v8.0.302-3.fc41.noarch
coreutils-9.5-9.fc42.x86_64
coreutils-common-9.5-9.fc42.x86_64
cpio-2.15-2.fc41.x86_64
cracklib-2.9.11-6.fc41.x86_64
crypto-policies-20240828-1.git5f66e81.fc42.noarch
curl-8.9.1-3.fc42.x86_64
cyrus-sasl-lib-2.1.28-27.fc41.x86_64
debugedit-5.0-17.fc41.x86_64
diffutils-3.10-8.fc41.x86_64
dwz-0.15-7.fc41.x86_64
ed-1.20.2-2.fc41.x86_64
efi-srpm-macros-5-12.fc41.noarch
elfutils-0.191-8.fc41.x86_64
elfutils-debuginfod-client-0.191-8.fc41.x86_64
elfutils-default-yama-scope-0.191-8.fc41.noarch
elfutils-libelf-0.191-8.fc41.x86_64
elfutils-libs-0.191-8.fc41.x86_64
fedora-gpg-keys-42-0.1.noarch
fedora-release-42-0.3.noarch
fedora-release-common-42-0.3.noarch
fedora-release-identity-basic-42-0.3.noarch
fedora-repos-42-0.1.noarch
fedora-repos-rawhide-42-0.1.noarch
file-5.45-7.fc41.x86_64
file-libs-5.45-7.fc41.x86_64
filesystem-3.18-23.fc41.x86_64
findutils-4.10.0-4.fc41.x86_64
fonts-srpm-macros-2.0.5-17.fc41.noarch
forge-srpm-macros-0.3.2-1.fc41.noarch
fpc-srpm-macros-1.3-13.fc41.noarch
gawk-5.3.0-4.fc41.x86_64
gdb-minimal-15.1-1.fc42.x86_64
gdbm-1.23-7.fc41.x86_64
gdbm-libs-1.23-7.fc41.x86_64
ghc-srpm-macros-1.9.1-2.fc41.noarch
glibc-2.40-3.fc41.x86_64
glibc-common-2.40-3.fc41.x86_64
glibc-gconv-extra-2.40-3.fc41.x86_64
glibc-minimal-langpack-2.40-3.fc41.x86_64
gmp-6.3.0-2.fc41.x86_64
gnat-srpm-macros-6-6.fc41.noarch
go-srpm-macros-3.6.0-3.fc41.noarch
grep-3.11-9.fc41.x86_64
gzip-1.13-2.fc41.x86_64
info-7.1-3.fc41.x86_64
jansson-2.13.1-10.fc41.x86_64
kernel-srpm-macros-1.0-24.fc41.noarch
keyutils-libs-1.6.3-4.fc41.x86_64
krb5-libs-1.21.3-2.fc41.x86_64
libacl-2.3.2-2.fc41.x86_64
libarchive-3.7.4-3.fc41.x86_64
libattr-2.5.2-4.fc41.x86_64
libblkid-2.40.2-8.fc42.x86_64
libbrotli-1.1.0-5.fc41.x86_64
libcap-2.70-4.fc41.x86_64
libcap-ng-0.8.5-3.fc41.x86_64
libcom_err-1.47.1-3.fc41.x86_64
libcurl-8.9.1-3.fc42.x86_64
libeconf-0.6.2-3.fc41.x86_64
libevent-2.1.12-14.fc41.x86_64
libfdisk-2.40.2-8.fc42.x86_64
libffi-3.4.6-3.fc42.x86_64
libgcc-14.2.1-1.fc42.x86_64
libgomp-14.2.1-1.fc42.x86_64
libidn2-2.3.7-2.fc41.x86_64
libmount-2.40.2-8.fc42.x86_64
libnghttp2-1.63.0-1.fc42.x86_64
libnsl2-2.0.1-2.fc41.x86_64
libpkgconf-2.3.0-1.fc42.x86_64
libpsl-0.21.5-4.fc41.x86_64
libpwquality-1.4.5-11.fc41.x86_64
libselinux-3.7-5.fc41.x86_64
libsemanage-3.7-2.fc41.x86_64
libsepol-3.7-2.fc41.x86_64
libsmartcols-2.40.2-8.fc42.x86_64
libssh-0.11.1-1.fc42.x86_64
libssh-config-0.11.1-1.fc42.noarch
libstdc++-14.2.1-1.fc42.x86_64
libtasn1-4.19.0-9.fc41.x86_64
libtirpc-1.3.5-0.fc41.x86_64
libtool-ltdl-2.4.7-12.fc41.x86_64
libunistring-1.1-8.fc41.x86_64
libuuid-2.40.2-8.fc42.x86_64
libverto-0.3.2-9.fc41.x86_64
libxcrypt-4.4.36-7.fc41.x86_64
libxml2-2.12.8-2.fc41.x86_64
libzstd-1.5.6-2.fc41.x86_64
lua-libs-5.4.6-6.fc41.x86_64
lua-srpm-macros-1-14.fc41.noarch
lz4-libs-1.10.0-1.fc41.x86_64
mpfr-4.2.1-5.fc41.x86_64
ncurses-base-6.5-2.20240629.fc41.noarch
ncurses-libs-6.5-2.20240629.fc41.x86_64
ocaml-srpm-macros-10-3.fc41.noarch
openblas-srpm-macros-2-18.fc41.noarch
openldap-2.6.8-5.fc41.x86_64
openssl-libs-3.2.2-5.fc41.x86_64
p11-kit-0.25.5-3.fc41.x86_64
p11-kit-trust-0.25.5-3.fc41.x86_64
package-notes-srpm-macros-0.5-12.fc41.noarch
pam-1.6.1-6.fc42.x86_64
pam-libs-1.6.1-6.fc42.x86_64
patch-2.7.6-25.fc41.x86_64
pcre2-10.44-1.fc41.1.x86_64
pcre2-syntax-10.44-1.fc41.1.noarch
perl-srpm-macros-1-56.fc41.noarch
pkgconf-2.3.0-1.fc42.x86_64
pkgconf-m4-2.3.0-1.fc42.noarch
pkgconf-pkg-config-2.3.0-1.fc42.x86_64
popt-1.19-7.fc41.x86_64
publicsuffix-list-dafsa-20240107-4.fc41.noarch
pyproject-srpm-macros-1.14.0-1.fc41.noarch
python-srpm-macros-3.13-3.fc41.noarch
qt5-srpm-macros-5.15.14-3.fc41.noarch
qt6-srpm-macros-6.7.2-3.fc41.noarch
readline-8.2-11.fc42.x86_64
redhat-rpm-config-294-1.fc42.noarch
rpm-4.19.93-1.fc42.x86_64
rpm-build-4.19.93-1.fc42.x86_64
rpm-build-libs-4.19.93-1.fc42.x86_64
rpm-libs-4.19.93-1.fc42.x86_64
rpm-sequoia-1.7.0-2.fc41.x86_64
rust-srpm-macros-26.3-3.fc42.noarch
sed-4.9-3.fc41.x86_64
setup-2.15.0-5.fc41.noarch
shadow-utils-4.15.1-9.fc41.x86_64
sqlite-libs-3.46.0-4.fc41.x86_64
systemd-libs-256.5-1.fc42.x86_64
tar-1.35-4.fc41.x86_64
unzip-6.0-64.fc41.x86_64
util-linux-2.40.2-8.fc42.x86_64
util-linux-core-2.40.2-8.fc42.x86_64
which-2.21-42.fc41.x86_64
xxhash-libs-0.8.2-3.fc41.x86_64
xz-5.6.2-2.fc41.x86_64
xz-libs-5.6.2-2.fc41.x86_64
zig-srpm-macros-1-3.fc41.noarch
zip-3.0-41.fc41.x86_64
zlib-ng-compat-2.1.7-2.fc41.x86_64
zstd-1.5.6-2.fc41.x86_64
Start: buildsrpm
Start: rpmbuild -bs
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1725408000
Wrote: /builddir/build/SRPMS/pymol-2.5.0-13.fc42.src.rpm
Finish: rpmbuild -bs
cp: preserving permissions for ‘/var/lib/copr-rpmbuild/results/chroot_scan/var/lib/mock/fedora-rawhide-x86_64-1725475717.931035/root/var/log’: No such file or directory
INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan
INFO: /var/lib/mock/fedora-rawhide-x86_64-1725475717.931035/root/var/log/dnf5.log
Finish: buildsrpm
INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-c4k1cflw/pymol/pymol.spec) Config(child) 0 minutes 14 seconds
INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results
INFO: Cleaning up build root ('cleanup_on_success=True')
Start: clean chroot
INFO: unmounting tmpfs.
Finish: clean chroot
INFO: Start(/var/lib/copr-rpmbuild/results/pymol-2.5.0-13.fc42.src.rpm)  Config(fedora-rawhide-x86_64)
Start: chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1725475717.931035/root.
INFO: calling preinit hooks
INFO: enabled root cache
Start: unpacking root cache
Finish: unpacking root cache
INFO: enabled package manager cache
Start: cleaning package manager metadata
Finish: cleaning package manager metadata
INFO: enabled HW Info plugin
INFO: Buildroot is handled by package management from host and used with --installroot:
  rpm-4.19.1.1-1.fc39.x86_64
  rpm-sequoia-1.6.0-1.fc39.x86_64
  python3-dnf-4.21.1-1.fc39.noarch
  python3-dnf-plugins-core-4.9.0-1.fc39.noarch
  yum-4.21.1-1.fc39.noarch
  dnf5-5.1.17-2.fc39.x86_64
  dnf5-plugins-5.1.17-2.fc39.x86_64
Finish: chroot init
Start: build phase for pymol-2.5.0-13.fc42.src.rpm
Start: build setup for pymol-2.5.0-13.fc42.src.rpm
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1725408000
Wrote: /builddir/build/SRPMS/pymol-2.5.0-13.fc42.src.rpm
Updating and loading repositories:
 Copr repository                        100% | 108.0 KiB/s |   2.2 KiB |  00m00s
 Additional repo http_kojipkgs_fedorapr 100% | 141.8 KiB/s |   3.8 KiB |  00m00s
 fedora                                 100% |  30.4 KiB/s |   6.4 KiB |  00m00s
Repositories loaded.
Package                           Arch   Version                 Repository                                                         Size
Installing:                                                                                                                             
 catch-devel                      x86_64 3.7.0-1.fc42            http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 964.9 KiB
 desktop-file-utils               x86_64 0.27-2.fc41             http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 230.4 KiB
 freeglut-devel                   x86_64 3.6.0-2.fc41            http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   2.3 MiB
 freetype-devel                   x86_64 2.13.2-6.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   7.8 MiB
 gcc-c++                          x86_64 14.2.1-1.fc42           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  38.2 MiB
 glew-devel                       x86_64 2.2.0-8.fc41            http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   1.8 MiB
 glm-devel                        noarch 1.0.1-2.fc41            http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   2.1 MiB
 libappstream-glib                x86_64 0.8.3-2.fc41            http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   1.4 MiB
 libpng-devel                     x86_64 2:1.6.40-4.fc41         http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 881.5 KiB
 libxml2-devel                    x86_64 2.12.8-2.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   3.4 MiB
 mesa-libGL-devel                 x86_64 24.2.1-2.fc42           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  80.9 KiB
 mmtf-cpp-devel                   x86_64 1.1.0-6.fc41            http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 114.4 KiB
 msgpack-devel                    x86_64 3.1.0-16.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   5.1 MiB
 netcdf-devel                     x86_64 4.9.2-6.fc41            http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 368.7 KiB
 python3-devel                    x86_64 3.13.0~rc1-3.fc42       http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   1.8 MiB
 python3-mmtf                     noarch 1.1.3-6.fc41            http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 179.5 KiB
 python3-numpy                    x86_64 1:1.26.4-8.fc41         http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  43.8 MiB
 python3-qt5-devel                x86_64 5.15.10-10.fc41         copr_base                                                       2.7 MiB
 python3-setuptools               noarch 69.2.0-8.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   7.2 MiB
 python3-simplejson               x86_64 3.19.2-5.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 464.3 KiB
Installing dependencies:                                                                                                                
 abattis-cantarell-vf-fonts       noarch 0.301-13.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 192.7 KiB
 alsa-lib                         x86_64 1.2.12-2.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   1.4 MiB
 annobin-docs                     noarch 12.70-1.fc42            http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  97.7 KiB
 annobin-plugin-gcc               x86_64 12.70-1.fc42            http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 985.6 KiB
 avahi-libs                       x86_64 0.8-30.fc42             http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 174.2 KiB
 blosc                            x86_64 1.21.6-1.fc42           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 130.3 KiB
 bluez-libs                       x86_64 5.77-2.fc41             http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 198.5 KiB
 brotli                           x86_64 1.1.0-5.fc41            http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  31.8 KiB
 brotli-devel                     x86_64 1.1.0-5.fc41            http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  65.6 KiB
 bzip2-devel                      x86_64 1.0.8-19.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 309.8 KiB
 cairo                            x86_64 1.18.0-4.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   1.7 MiB
 cairo-devel                      x86_64 1.18.0-4.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   2.3 MiB
 catch                            x86_64 3.7.0-1.fc42            http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 942.6 KiB
 cdparanoia-libs                  x86_64 10.2-45.fc41            http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 113.7 KiB
 cmake                            x86_64 3.28.3-7.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  31.6 MiB
 cmake-data                       noarch 3.28.3-7.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   8.0 MiB
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 mesa-libgbm                      x86_64 24.2.1-2.fc42           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  69.3 KiB
 mesa-libglapi                    x86_64 24.2.1-2.fc42           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 172.4 KiB
 mpdecimal                        x86_64 2.5.1-16.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 204.9 KiB
 mpg123-libs                      x86_64 1.31.3-5.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 787.3 KiB
 msgpack                          x86_64 3.1.0-16.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  59.3 KiB
 mtdev                            x86_64 1.1.6-9.fc41            http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  25.3 KiB
 ncurses                          x86_64 6.5-2.20240629.fc41     http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 627.3 KiB
 netcdf                           x86_64 4.9.2-6.fc41            http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   2.4 MiB
 nettle                           x86_64 3.10-3.fc41             http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 793.0 KiB
 openal-soft                      x86_64 1.23.1-6.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   1.4 MiB
 openblas                         x86_64 0.3.26-5.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  96.0 KiB
 openblas-openmp                  x86_64 0.3.26-5.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  39.4 MiB
 openssl-devel                    x86_64 1:3.2.2-5.fc41          http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   4.3 MiB
 opus                             x86_64 1.5.2-1.fc42            http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 411.7 KiB
 orc                              x86_64 0.4.39-1.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 759.7 KiB
 pango                            x86_64 1.54.0-2.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 996.2 KiB
 pcre2-devel                      x86_64 10.44-1.fc41.1          http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   2.0 MiB
 pcre2-utf16                      x86_64 10.44-1.fc41.1          http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 590.1 KiB
 pcre2-utf32                      x86_64 10.44-1.fc41.1          http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 562.0 KiB
 perl-AutoLoader                  noarch 5.74-511.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  20.5 KiB
 perl-B                           x86_64 1.89-511.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 498.0 KiB
 perl-Carp                        noarch 1.54-511.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  46.6 KiB
 perl-Class-Struct                noarch 0.68-511.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  25.4 KiB
 perl-Data-Dumper                 x86_64 2.189-512.fc41          http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 111.7 KiB
 perl-Digest                      noarch 1.20-511.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  35.3 KiB
 perl-Digest-MD5                  x86_64 2.59-5.fc41             http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  59.8 KiB
 perl-DynaLoader                  x86_64 1.56-511.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  32.1 KiB
 perl-Encode                      x86_64 4:3.21-511.fc41         http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   4.7 MiB
 perl-English                     noarch 1.11-511.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   6.2 KiB
 perl-Errno                       x86_64 1.38-511.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   8.4 KiB
 perl-Exporter                    noarch 5.78-511.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  54.3 KiB
 perl-Fcntl                       x86_64 1.18-511.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  49.0 KiB
 perl-File-Basename               noarch 2.86-511.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  14.0 KiB
 perl-File-Find                   noarch 1.44-511.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  41.9 KiB
 perl-File-Path                   noarch 2.18-511.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  63.5 KiB
 perl-File-Temp                   noarch 1:0.231.100-511.fc41    http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 162.3 KiB
 perl-File-stat                   noarch 1.14-511.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  12.5 KiB
 perl-FileHandle                  noarch 2.05-511.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   9.3 KiB
 perl-Getopt-Long                 noarch 1:2.58-2.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 144.5 KiB
 perl-Getopt-Std                  noarch 1.14-511.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  11.2 KiB
 perl-HTTP-Tiny                   noarch 0.088-512.fc41          http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 152.2 KiB
 perl-IO                          x86_64 1.55-511.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 151.1 KiB
 perl-IO-Socket-IP                noarch 0.42-512.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  98.7 KiB
 perl-IO-Socket-SSL               noarch 2.089-1.fc42            http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 703.3 KiB
 perl-IPC-Open3                   noarch 1.22-511.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  22.5 KiB
 perl-MIME-Base64                 x86_64 3.16-511.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  46.1 KiB
 perl-Mozilla-CA                  noarch 20240730-1.fc41         http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   9.8 KiB
 perl-Net-SSLeay                  x86_64 1.94-7.fc41             http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   1.3 MiB
 perl-POSIX                       x86_64 2.20-511.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 235.1 KiB
 perl-PathTools                   x86_64 3.91-511.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 180.0 KiB
 perl-Pod-Escapes                 noarch 1:1.07-511.fc41         http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  24.9 KiB
 perl-Pod-Perldoc                 noarch 3.28.01-512.fc41        http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 163.7 KiB
 perl-Pod-Simple                  noarch 1:3.45-511.fc41         http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 560.9 KiB
 perl-Pod-Usage                   noarch 4:2.03-511.fc41         http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  84.8 KiB
 perl-Scalar-List-Utils           x86_64 5:1.65-1.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 146.5 KiB
 perl-SelectSaver                 noarch 1.02-511.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   2.2 KiB
 perl-Socket                      x86_64 4:2.038-511.fc41        http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 124.0 KiB
 perl-Storable                    x86_64 1:3.32-511.fc41         http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 232.4 KiB
 perl-Symbol                      noarch 1.09-511.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   6.8 KiB
 perl-Term-ANSIColor              noarch 5.01-512.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  97.5 KiB
 perl-Term-Cap                    noarch 1.18-511.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  29.3 KiB
 perl-Text-ParseWords             noarch 3.31-511.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  13.6 KiB
 perl-Text-Tabs+Wrap              noarch 2024.001-511.fc41       http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  22.6 KiB
 perl-Time-Local                  noarch 2:1.350-511.fc41        http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  69.0 KiB
 perl-URI                         noarch 5.28-2.fc41             http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 240.7 KiB
 perl-base                        noarch 2.27-511.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  12.5 KiB
 perl-constant                    noarch 1.33-512.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  26.2 KiB
 perl-if                          noarch 0.61.000-511.fc41       http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   5.8 KiB
 perl-interpreter                 x86_64 4:5.40.0-511.fc41       http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 122.3 KiB
 perl-libnet                      noarch 3.15-512.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 289.4 KiB
 perl-libs                        x86_64 4:5.40.0-511.fc41       http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   9.9 MiB
 perl-locale                      noarch 1.12-511.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   6.5 KiB
 perl-mro                         x86_64 1.29-511.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  45.6 KiB
 perl-overload                    noarch 1.37-511.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  71.5 KiB
 perl-overloading                 noarch 0.02-511.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   4.8 KiB
 perl-parent                      noarch 1:0.242-1.fc42          http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  10.0 KiB
 perl-podlators                   noarch 1:6.0.2-2.fc41          http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 317.5 KiB
 perl-vars                        noarch 1.05-511.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   3.9 KiB
 pixman                           x86_64 0.43.4-2.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 718.1 KiB
 pixman-devel                     x86_64 0.43.4-2.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  49.4 KiB
 publicsuffix-list                noarch 20240107-4.fc41         http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 318.0 KiB
 pulseaudio-libs                  x86_64 17.0-2.fc41             http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   3.4 MiB
 pyproject-rpm-macros             noarch 1.14.0-1.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 105.7 KiB
 python-pip-wheel                 noarch 24.2-1.fc41             copr_base                                                       1.2 MiB
 python-qt5-rpm-macros            noarch 5.15.10-10.fc41         copr_base                                                     146.0   B
 python-rpm-macros                noarch 3.13-3.fc41             http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  22.1 KiB
 python3                          x86_64 3.13.0~rc1-3.fc42       http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  31.8 KiB
 python3-dbus                     x86_64 1.3.2-8.fc41            http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 520.7 KiB
 python3-libs                     x86_64 3.13.0~rc1-3.fc42       http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  40.3 MiB
 python3-msgpack                  x86_64 1.0.7-5.fc41            http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 419.8 KiB
 python3-packaging                noarch 24.1-2.fc41             http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 422.3 KiB
 python3-pyqt5-sip                x86_64 12.15.0-3.fc41          copr_base                                                     162.7 KiB
 python3-qt5                      x86_64 5.15.10-10.fc41         copr_base                                                       6.0 MiB
 python3-qt5-base                 x86_64 5.15.10-10.fc41         copr_base                                                      15.5 MiB
 python3-rpm-generators           noarch 14-11.fc41              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  81.7 KiB
 python3-rpm-macros               noarch 3.13-3.fc41             http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   6.4 KiB
 qt-settings                      noarch 41.1-1.fc42             http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   1.1 KiB
 qt5-filesystem                   x86_64 5.15.14-3.fc41          http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   0.0   B
 qt5-qtbase                       x86_64 5.15.14-7.fc41          http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  10.0 MiB
 qt5-qtbase-common                noarch 5.15.14-7.fc41          http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  78.0   B
 qt5-qtbase-devel                 x86_64 5.15.14-7.fc41          http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  19.2 MiB
 qt5-qtbase-gui                   x86_64 5.15.14-7.fc41          http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  20.1 MiB
 qt5-qtconnectivity               x86_64 5.15.14-2.fc41          http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   1.4 MiB
 qt5-qtdeclarative                x86_64 5.15.14-3.fc41          http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  14.4 MiB
 qt5-qtlocation                   x86_64 5.15.14-2.fc41          http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  10.9 MiB
 qt5-qtmultimedia                 x86_64 5.15.14-2.fc41          http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   3.0 MiB
 qt5-qtsensors                    x86_64 5.15.14-2.fc41          http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 939.9 KiB
 qt5-qtserialport                 x86_64 5.15.14-2.fc41          http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 219.1 KiB
 qt5-qtsvg                        x86_64 5.15.14-2.fc41          http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 639.8 KiB
 qt5-qttools-common               noarch 5.15.14-2.fc41          http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   7.5 KiB
 qt5-qttools-libs-designer        x86_64 5.15.14-2.fc41          http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   4.9 MiB
 qt5-qttools-libs-help            x86_64 5.15.14-2.fc41          http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 457.0 KiB
 qt5-qtwebchannel                 x86_64 5.15.14-2.fc41          http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 299.1 KiB
 qt5-qtwebsockets                 x86_64 5.15.14-2.fc41          http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 271.4 KiB
 qt5-qtx11extras                  x86_64 5.15.14-2.fc41          http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 118.9 KiB
 qt5-qtxmlpatterns                x86_64 5.15.14-2.fc41          http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   2.9 MiB
 qt5-rpm-macros                   noarch 5.15.14-3.fc41          http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   1.6 KiB
 rhash                            x86_64 1.4.4-2.fc41            http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 349.9 KiB
 shared-mime-info                 x86_64 2.3-6.fc41              http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   5.2 MiB
 snappy                           x86_64 1.2.1-3.fc42            http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  71.1 KiB
 sysprof-capture-devel            x86_64 47~beta-1.fc41          http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 252.6 KiB
 tzdata                           noarch 2024a-9.fc41            http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   1.7 MiB
 vim-filesystem                   noarch 2:9.1.703-1.fc42        http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  40.0   B
 vulkan-headers                   noarch 1.3.290.0-1.fc42        http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  26.0 MiB
 vulkan-loader                    x86_64 1.3.290.0-1.fc42        http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 512.5 KiB
 vulkan-loader-devel              x86_64 1.3.290.0-1.fc42        http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   7.8 KiB
 xcb-util                         x86_64 0.4.1-6.fc41            http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  30.4 KiB
 xcb-util-image                   x86_64 0.4.1-6.fc41            http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  22.2 KiB
 xcb-util-keysyms                 x86_64 0.4.1-6.fc41            http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  16.8 KiB
 xcb-util-renderutil              x86_64 0.3.10-6.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  28.5 KiB
 xcb-util-wm                      x86_64 0.4.2-6.fc41            http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  85.4 KiB
 xkeyboard-config                 noarch 2.42-2.fc41             http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   6.5 MiB
 xml-common                       noarch 0.6.3-65.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch  78.4 KiB
 xorg-x11-proto-devel             noarch 2024.1-3.fc41           http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch   1.7 MiB
 xz-devel                         x86_64 1:5.6.2-2.fc41          http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 255.6 KiB
 zlib-ng-compat-devel             x86_64 2.1.7-2.fc41            http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 106.8 KiB

Transaction Summary:
 Installing:      327 packages

Total size of inbound packages is 283 MiB. Need to download 283 MiB.
After this operation 1 GiB will be used (install 1 GiB, remove 0 B).
[  1/327] desktop-file-utils-0:0.27-2.f 100% |   2.5 MiB/s |  68.9 KiB |  00m00s
[  2/327] freeglut-devel-0:3.6.0-2.fc41 100% |  26.2 MiB/s | 886.9 KiB |  00m00s
[  3/327] catch-devel-0:3.7.0-1.fc42.x8 100% |   6.5 MiB/s | 228.0 KiB |  00m00s
[  4/327] glew-devel-0:2.2.0-8.fc41.x86 100% |  42.3 MiB/s | 216.4 KiB |  00m00s
[  5/327] glm-devel-0:1.0.1-2.fc41.noar 100% |  34.7 MiB/s | 248.6 KiB |  00m00s
[  6/327] mesa-libGL-devel-0:24.2.1-2.f 100% |   9.3 MiB/s |  38.3 KiB |  00m00s
[  7/327] freetype-devel-0:2.13.2-6.fc4 100% |  33.0 MiB/s | 912.9 KiB |  00m00s
[  8/327] libappstream-glib-0:0.8.3-2.f 100% |  55.6 MiB/s | 398.8 KiB |  00m00s
[  9/327] libpng-devel-2:1.6.40-4.fc41. 100% |  31.6 MiB/s | 290.9 KiB |  00m00s
[ 10/327] libxml2-devel-0:2.12.8-2.fc41 100% |  69.1 MiB/s | 495.2 KiB |  00m00s
[ 11/327] mmtf-cpp-devel-0:1.1.0-6.fc41 100% |   6.0 MiB/s |  30.5 KiB |  00m00s
[ 12/327] msgpack-devel-0:3.1.0-16.fc41 100% |  43.5 MiB/s | 311.5 KiB |  00m00s
[ 13/327] netcdf-devel-0:4.9.2-6.fc41.x 100% |  14.8 MiB/s |  90.7 KiB |  00m00s
[ 14/327] python3-mmtf-0:1.1.3-6.fc41.n 100% |  15.6 MiB/s |  64.0 KiB |  00m00s
[ 15/327] python3-devel-0:3.13.0~rc1-3. 100% |  34.8 MiB/s | 356.6 KiB |  00m00s
[ 16/327] python3-qt5-devel-0:5.15.10-1 100% |  32.0 MiB/s | 393.3 KiB |  00m00s
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[ 18/327] python3-simplejson-0:3.19.2-5 100% |  15.4 MiB/s | 142.1 KiB |  00m00s
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[252/327] abattis-cantarell-vf-fonts-0: 100% |  16.8 MiB/s | 120.2 KiB |  00m00s
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[255/327] fontconfig-devel-0:2.15.0-8.f 100% |  21.0 MiB/s | 128.8 KiB |  00m00s
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[259/327] opus-0:1.5.2-1.fc42.x86_64    100% |   1.0 MiB/s | 225.5 KiB |  00m00s
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[261/327] openblas-openmp-0:0.3.26-5.fc 100% |  85.8 MiB/s |   5.1 MiB |  00m00s
[262/327] duktape-0:2.7.0-8.fc41.x86_64 100% |  18.4 MiB/s | 169.7 KiB |  00m00s
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[265/327] xcb-util-0:0.4.1-6.fc41.x86_6 100% |   3.6 MiB/s |  18.2 KiB |  00m00s
[266/327] perl-mro-0:1.29-511.fc41.x86_ 100% |   2.9 MiB/s |  29.9 KiB |  00m00s
[267/327] perl-overloading-0:0.02-511.f 100% |   2.1 MiB/s |  12.9 KiB |  00m00s
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[269/327] perl-podlators-1:6.0.2-2.fc41 100% |  24.4 MiB/s | 124.8 KiB |  00m00s
[270/327] perl-Pod-Perldoc-0:3.28.01-51 100% |   8.7 MiB/s |  80.5 KiB |  00m00s
[271/327] perl-File-Temp-1:0.231.100-51 100% |   6.4 MiB/s |  59.1 KiB |  00m00s
[272/327] groff-base-0:1.23.0-7.fc41.x8 100% |  59.6 MiB/s |   1.1 MiB |  00m00s
[273/327] perl-HTTP-Tiny-0:0.088-512.fc 100% |   6.8 MiB/s |  55.8 KiB |  00m00s
[274/327] perl-Pod-Simple-1:3.45-511.fc 100% |  25.6 MiB/s | 209.6 KiB |  00m00s
[275/327] perl-IPC-Open3-0:1.22-511.fc4 100% |   2.4 MiB/s |  21.8 KiB |  00m00s
[276/327] perl-POSIX-0:2.20-511.fc41.x8 100% |   6.3 MiB/s |  97.0 KiB |  00m00s
[277/327] perl-IO-Socket-SSL-0:2.089-1. 100% |  11.9 MiB/s | 231.2 KiB |  00m00s
[278/327] cmake-0:3.28.3-7.fc41.x86_64  100% | 110.8 MiB/s |   9.7 MiB |  00m00s
[279/327] perl-Mozilla-CA-0:20240730-1. 100% | 838.7 KiB/s |  14.3 KiB |  00m00s
[280/327] perl-Net-SSLeay-0:1.94-7.fc41 100% |  26.9 MiB/s | 357.6 KiB |  00m00s
[281/327] perl-Time-Local-2:1.350-511.f 100% |   4.8 MiB/s |  34.5 KiB |  00m00s
[282/327] pcre2-utf32-0:10.44-1.fc41.1. 100% |  25.7 MiB/s | 210.4 KiB |  00m00s
[283/327] fribidi-0:1.0.15-2.fc41.x86_6 100% |   9.0 MiB/s |  92.2 KiB |  00m00s
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[285/327] libXft-0:2.3.8-7.fc41.x86_64  100% |   8.8 MiB/s |  72.3 KiB |  00m00s
[286/327] libthai-0:0.1.29-9.fc41.x86_6 100% |  23.0 MiB/s | 211.8 KiB |  00m00s
[287/327] libdatrie-0:0.2.13-10.fc41.x8 100% |   5.2 MiB/s |  32.2 KiB |  00m00s
[288/327] libwacom-data-0:2.13.0-1.fc42 100% |  22.3 MiB/s | 182.8 KiB |  00m00s
[289/327] libsepol-devel-0:3.7-2.fc41.x 100% |   9.8 MiB/s |  40.1 KiB |  00m00s
[290/327] gupnp-igd-0:1.6.0-5.fc41.x86_ 100% |   8.2 MiB/s |  33.8 KiB |  00m00s
[291/327] gssdp-0:1.6.3-3.fc41.x86_64   100% |  14.2 MiB/s |  58.0 KiB |  00m00s
[292/327] gupnp-0:1.6.6-2.fc40.x86_64   100% |  20.9 MiB/s | 107.1 KiB |  00m00s
[293/327] dbus-1:1.14.10-4.fc41.x86_64  100% |   1.9 MiB/s |   7.9 KiB |  00m00s
[294/327] google-noto-fonts-common-0:20 100% |   3.5 MiB/s |  17.8 KiB |  00m00s
[295/327] libsoup3-0:3.6.0-1.fc42.x86_6 100% |  40.9 MiB/s | 377.0 KiB |  00m00s
[296/327] dbus-broker-0:36-4.fc41.x86_6 100% |  33.5 MiB/s | 171.7 KiB |  00m00s
[297/327] cmake-rpm-macros-0:3.28.3-7.f 100% |   2.9 MiB/s |  17.7 KiB |  00m00s
[298/327] gettext-0:0.22.5-6.fc41.x86_6 100% |  62.5 MiB/s |   1.1 MiB |  00m00s
[299/327] jsoncpp-0:1.9.5-8.fc41.x86_64 100% |  19.4 MiB/s |  99.3 KiB |  00m00s
[300/327] cmake-data-0:3.28.3-7.fc41.no 100% | 103.4 MiB/s |   1.8 MiB |  00m00s
[301/327] rhash-0:1.4.4-2.fc41.x86_64   100% |  27.3 MiB/s | 196.0 KiB |  00m00s
[302/327] libuv-1:1.48.0-2.fc41.x86_64  100% |  22.7 MiB/s | 256.1 KiB |  00m00s
[303/327] perl-Term-Cap-0:1.18-511.fc41 100% |   7.2 MiB/s |  22.1 KiB |  00m00s
[304/327] perl-Term-ANSIColor-0:5.01-51 100% |  11.6 MiB/s |  47.7 KiB |  00m00s
[305/327] perl-Pod-Escapes-1:1.07-511.f 100% |   4.8 MiB/s |  19.8 KiB |  00m00s
[306/327] perl-Text-Tabs+Wrap-0:2024.00 100% |   5.3 MiB/s |  21.9 KiB |  00m00s
[307/327] ncurses-0:6.5-2.20240629.fc41 100% |  51.2 MiB/s | 419.1 KiB |  00m00s
[308/327] perl-if-0:0.61.000-511.fc41.n 100% |   3.4 MiB/s |  14.0 KiB |  00m00s
[309/327] perl-locale-0:1.12-511.fc41.n 100% |   4.4 MiB/s |  13.6 KiB |  00m00s
[310/327] perl-IO-Socket-IP-0:0.42-512. 100% |  10.2 MiB/s |  41.8 KiB |  00m00s
[311/327] perl-AutoLoader-0:5.74-511.fc 100% |   3.5 MiB/s |  21.2 KiB |  00m00s
[312/327] perl-URI-0:5.28-2.fc41.noarch 100% |  23.5 MiB/s | 120.1 KiB |  00m00s
[313/327] gettext-runtime-0:0.22.5-6.fc 100% |  22.1 MiB/s | 113.0 KiB |  00m00s
[314/327] libtextstyle-0:0.22.5-6.fc41. 100% |  17.3 MiB/s |  88.4 KiB |  00m00s
[315/327] vim-filesystem-2:9.1.703-1.fc 100% |   4.1 MiB/s |  16.9 KiB |  00m00s
[316/327] gettext-libs-0:0.22.5-6.fc41. 100% |  59.2 MiB/s | 666.4 KiB |  00m00s
[317/327] dbus-common-1:1.14.10-4.fc41. 100% |   2.0 MiB/s |  14.7 KiB |  00m00s
[318/327] perl-Data-Dumper-0:2.189-512. 100% |  13.8 MiB/s |  56.3 KiB |  00m00s
[319/327] perl-libnet-0:3.15-512.fc41.n 100% |  20.0 MiB/s | 123.0 KiB |  00m00s
[320/327] perl-B-0:1.89-511.fc41.x86_64 100% |  28.7 MiB/s | 176.3 KiB |  00m00s
[321/327] gettext-envsubst-0:0.22.5-6.f 100% |   6.1 MiB/s |  37.8 KiB |  00m00s
[322/327] perl-FileHandle-0:2.05-511.fc 100% |   3.0 MiB/s |  15.5 KiB |  00m00s
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[325/327] hdf-libs-0:4.2.16.2-2.fc41.x8 100% |  40.1 MiB/s | 287.4 KiB |  00m00s
[326/327] libedit-0:3.1-53.20240808cvs. 100% |  17.2 MiB/s | 105.6 KiB |  00m00s
[327/327] llvm-libs-0:18.1.8-2.fc41.x86 100% | 168.7 MiB/s |  28.0 MiB |  00m00s
--------------------------------------------------------------------------------
[327/327] Total                         100% | 163.3 MiB/s | 283.5 MiB |  00m02s
Running transaction
[  1/329] Verify package files          100% | 383.0   B/s | 327.0   B |  00m01s
[  2/329] Prepare transaction           100% |   1.8 KiB/s | 327.0   B |  00m00s
[  3/329] Installing cmake-filesystem-0 100% |   7.0 MiB/s |   7.1 KiB |  00m00s
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[  5/329] Installing expat-0:2.6.2-2.fc 100% | 280.1 MiB/s | 286.8 KiB |  00m00s
[  6/329] Installing libpng-2:1.6.40-4. 100% | 241.3 MiB/s | 247.1 KiB |  00m00s
[  7/329] Installing libX11-xcb-0:1.8.1 100% |   0.0   B/s |  15.9 KiB |  00m00s
[  8/329] Installing libogg-2:1.3.5-9.f 100% |   0.0   B/s |  51.0 KiB |  00m00s
[  9/329] Installing libwayland-client- 100% |  61.8 MiB/s |  63.3 KiB |  00m00s
[ 10/329] Installing dbus-libs-1:1.14.1 100% | 361.4 MiB/s | 370.0 KiB |  00m00s
[ 11/329] Installing libglvnd-1:1.7.0-5 100% | 519.1 MiB/s | 531.6 KiB |  00m00s
[ 12/329] Installing libicu-0:74.2-2.fc 100% | 392.7 MiB/s |  35.0 MiB |  00m00s
[ 13/329] Installing libmpc-0:1.3.1-6.f 100% | 162.3 MiB/s | 166.2 KiB |  00m00s
[ 14/329] Installing libjpeg-turbo-0:3. 100% | 380.2 MiB/s | 778.7 KiB |  00m00s
[ 15/329] Installing libgfortran-0:14.2 100% | 434.9 MiB/s |   3.0 MiB |  00m00s
[ 16/329] Installing xorg-x11-proto-dev 100% | 297.1 MiB/s |   1.8 MiB |  00m00s
[ 17/329] Installing libglvnd-opengl-1: 100% |   0.0   B/s | 149.7 KiB |  00m00s
[ 18/329] Installing fonts-filesystem-1 100% |   0.0   B/s | 788.0   B |  00m00s
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[ 21/329] Installing python-rpm-macros- 100% |   0.0   B/s |  22.8 KiB |  00m00s
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[ 23/329] Installing hdf5-0:1.12.1-20.f 100% | 381.5 MiB/s |   8.4 MiB |  00m00s
[ 24/329] Installing libvorbis-1:1.3.7- 100% | 408.3 MiB/s | 836.2 KiB |  00m00s
[ 25/329] Installing libpng-devel-2:1.6 100% | 288.2 MiB/s | 885.4 KiB |  00m00s
[ 26/329] Installing libtextstyle-0:0.2 100% | 191.9 MiB/s | 196.5 KiB |  00m00s
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[ 28/329] Installing pixman-0:0.43.4-2. 100% | 100.3 MiB/s | 719.2 KiB |  00m00s
>>> Running pre-install scriptlet: xml-common-0:0.6.3-65.fc41.noarch
>>> Stop pre-install scriptlet: xml-common-0:0.6.3-65.fc41.noarch
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[ 30/329] Installing vulkan-loader-0:1. 100% | 251.5 MiB/s | 515.1 KiB |  00m00s
[ 31/329] Installing graphite2-0:1.3.14 100% | 189.6 MiB/s | 194.1 KiB |  00m00s
[ 32/329] Installing libevdev-0:1.13.3- 100% |   0.0   B/s |  87.2 KiB |  00m00s
[ 33/329] Installing opus-0:1.5.2-1.fc4 100% | 403.1 MiB/s | 412.8 KiB |  00m00s
[ 34/329] Installing libwayland-server- 100% |  77.9 MiB/s |  79.8 KiB |  00m00s
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[ 36/329] Installing libICE-0:1.1.1-4.f 100% | 178.3 MiB/s | 182.6 KiB |  00m00s
[ 37/329] Installing alsa-lib-0:1.2.12- 100% | 232.5 MiB/s |   1.4 MiB |  00m00s
[ 38/329] Installing qt5-qttools-common 100% |   0.0   B/s |   7.9 KiB |  00m00s
[ 39/329] Installing emacs-filesystem-1 100% |   0.0   B/s | 544.0   B |  00m00s
[ 40/329] Installing make-1:4.4.1-8.fc4 100% | 257.2 MiB/s |   1.8 MiB |  00m00s
[ 41/329] Installing kernel-headers-0:6 100% | 204.5 MiB/s |   6.5 MiB |  00m00s
[ 42/329] Installing libXau-0:1.0.11-7. 100% |  66.8 MiB/s |  68.4 KiB |  00m00s
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[ 53/329] Installing libSM-0:1.2.4-4.fc 100% |  96.3 MiB/s |  98.7 KiB |  00m00s
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[ 55/329] Installing iso-codes-0:4.16.0 100% | 301.9 MiB/s |  19.0 MiB |  00m00s
[ 56/329] Installing pixman-devel-0:0.4 100% |   0.0   B/s |  50.2 KiB |  00m00s
[ 57/329] Installing pyproject-rpm-macr 100% | 105.1 MiB/s | 107.7 KiB |  00m00s
[ 58/329] Installing libaec-devel-0:1.1 100% |   0.0   B/s |  12.9 KiB |  00m00s
[ 59/329] Installing abattis-cantarell- 100% | 189.9 MiB/s | 194.4 KiB |  00m00s
[ 60/329] Installing mesa-libGLU-0:9.0. 100% | 175.1 MiB/s | 358.6 KiB |  00m00s
[ 61/329] Installing hdf-libs-0:4.2.16. 100% | 338.2 MiB/s | 692.7 KiB |  00m00s
[ 62/329] Installing cpp-0:14.2.1-1.fc4 100% | 368.4 MiB/s |  35.0 MiB |  00m00s
[ 63/329] Installing libicu-devel-0:74. 100% | 296.9 MiB/s |   5.6 MiB |  00m00s
[ 64/329] Installing avahi-libs-0:0.8-3 100% | 172.7 MiB/s | 176.8 KiB |  00m00s
[ 65/329] Installing libwayland-cursor- 100% |  37.6 MiB/s |  38.5 KiB |  00m00s
[ 66/329] Installing flac-libs-0:1.4.3- 100% | 220.4 MiB/s | 677.0 KiB |  00m00s
[ 67/329] Installing libtheora-1:1.1.1- 100% | 234.4 MiB/s | 480.0 KiB |  00m00s
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[ 69/329] Installing libedit-0:3.1-53.2 100% | 240.0 MiB/s | 245.8 KiB |  00m00s
[ 70/329] Installing llvm-libs-0:18.1.8 100% | 421.8 MiB/s | 113.5 MiB |  00m00s
[ 71/329] Installing gettext-envsubst-0 100% |  74.6 MiB/s |  76.3 KiB |  00m00s
[ 72/329] Installing gettext-runtime-0: 100% | 119.8 MiB/s | 490.7 KiB |  00m00s
[ 73/329] Installing gettext-0:0.22.5-6 100% | 349.3 MiB/s |   5.2 MiB |  00m00s
[ 74/329] Installing vim-filesystem-2:9 100% |   4.6 MiB/s |   4.7 KiB |  00m00s
[ 75/329] Installing dbus-common-1:1.14 100% | 645.3 KiB/s |  13.6 KiB |  00m00s
>>> Running post-install scriptlet: dbus-common-1:1.14.10-4.fc41.noarch
>>> Stop post-install scriptlet: dbus-common-1:1.14.10-4.fc41.noarch
>>> Running pre-install scriptlet: dbus-broker-0:36-4.fc41.x86_64
>>> Stop pre-install scriptlet: dbus-broker-0:36-4.fc41.x86_64
[ 76/329] Installing dbus-broker-0:36-4 100% |  53.7 MiB/s | 385.3 KiB |  00m00s
>>> Running post-install scriptlet: dbus-broker-0:36-4.fc41.x86_64
>>> Stop post-install scriptlet: dbus-broker-0:36-4.fc41.x86_64
[ 77/329] Installing dbus-1:1.14.10-4.f 100% |   0.0   B/s | 124.0   B |  00m00s
[ 78/329] Installing ncurses-0:6.5-2.20 100% | 206.3 MiB/s | 633.9 KiB |  00m00s
[ 79/329] Installing rhash-0:1.4.4-2.fc 100% | 173.4 MiB/s | 355.1 KiB |  00m00s
[ 80/329] Installing libuv-1:1.48.0-2.f 100% | 268.4 MiB/s | 549.6 KiB |  00m00s
[ 81/329] Installing jsoncpp-0:1.9.5-8. 100% | 249.0 MiB/s | 254.9 KiB |  00m00s
[ 82/329] Installing google-noto-fonts- 100% |   0.0   B/s |  18.3 KiB |  00m00s
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[ 84/329] Installing default-fonts-core 100% |  17.8 MiB/s |  18.2 KiB |  00m00s
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[ 94/329] Installing fribidi-0:1.0.15-2 100% | 362.2 MiB/s | 370.9 KiB |  00m00s
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>>> Running pre-install scriptlet: groff-base-0:1.23.0-7.fc41.x86_64
>>> Stop pre-install scriptlet: groff-base-0:1.23.0-7.fc41.x86_64
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>>> Running post-install scriptlet: groff-base-0:1.23.0-7.fc41.x86_64
>>> Stop post-install scriptlet: groff-base-0:1.23.0-7.fc41.x86_64
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[100/329] Installing perl-B-0:1.89-511. 100% | 244.8 MiB/s | 501.3 KiB |  00m00s
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[161/329] Installing sysprof-capture-de 100% | 249.4 MiB/s | 255.4 KiB |  00m00s
[162/329] Installing libffi-devel-0:3.4 100% |  34.0 MiB/s |  34.8 KiB |  00m00s
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[166/329] Installing gcc-0:14.2.1-1.fc4 100% | 405.4 MiB/s | 104.2 MiB |  00m00s
>>> Running trigger-install scriptlet: redhat-rpm-config-0:294-1.fc42.noarch
>>> Stop trigger-install scriptlet: redhat-rpm-config-0:294-1.fc42.noarch
[167/329] Installing libquadmath-devel- 100% |  22.7 MiB/s |  23.3 KiB |  00m00s
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[170/329] Installing nettle-0:3.10-3.fc 100% | 259.2 MiB/s | 796.1 KiB |  00m00s
[171/329] Installing gnutls-0:3.8.7-2.f 100% | 359.7 MiB/s |   3.2 MiB |  00m00s
[172/329] Installing glib2-0:2.82.0-1.f 100% | 397.0 MiB/s |  14.7 MiB |  00m00s
[173/329] Installing harfbuzz-0:9.0.0-3 100% | 331.3 MiB/s |   2.7 MiB |  00m00s
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[175/329] Installing fontconfig-0:2.15. 100% | 795.2 KiB/s | 811.1 KiB |  00m01s
>>> Running post-install scriptlet: fontconfig-0:2.15.0-8.fc41.x86_64
>>> Stop post-install scriptlet: fontconfig-0:2.15.0-8.fc41.x86_64
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>>> Running post-install scriptlet: shared-mime-info-0:2.3-6.fc41.x86_64
>>> Stop post-install scriptlet: shared-mime-info-0:2.3-6.fc41.x86_64
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>>> Running post-install scriptlet: libinput-0:1.26.2-1.fc42.x86_64
>>> Stop post-install scriptlet: libinput-0:1.26.2-1.fc42.x86_64
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>>> Running pre-install scriptlet: qt5-qtbase-0:5.15.14-7.fc41.x86_64
>>> Stop pre-install scriptlet: qt5-qtbase-0:5.15.14-7.fc41.x86_64
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>>> Running post-install scriptlet: qt5-qtbase-0:5.15.14-7.fc41.x86_64
>>> Stop post-install scriptlet: qt5-qtbase-0:5.15.14-7.fc41.x86_64
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>>> Running trigger-install scriptlet: redhat-rpm-config-0:294-1.fc42.noarch
>>> Stop trigger-install scriptlet: redhat-rpm-config-0:294-1.fc42.noarch
[321/329] Installing python3-mmtf-0:1.1 100% |  48.0 MiB/s | 196.6 KiB |  00m00s
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[328/329] Installing gcc-plugin-annobin 100% |   4.1 MiB/s |  62.7 KiB |  00m00s
>>> Running trigger-install scriptlet: redhat-rpm-config-0:294-1.fc42.noarch
>>> Stop trigger-install scriptlet: redhat-rpm-config-0:294-1.fc42.noarch
[329/329] Installing glm-devel-0:1.0.1- 100% |   4.2 MiB/s |   2.2 MiB |  00m01s
>>> Running post-transaction scriptlet: fontconfig-0:2.15.0-8.fc41.x86_64
>>> Stop post-transaction scriptlet: fontconfig-0:2.15.0-8.fc41.x86_64
>>> Running trigger-install scriptlet: glibc-common-0:2.40-3.fc41.x86_64
>>> Stop trigger-install scriptlet: glibc-common-0:2.40-3.fc41.x86_64
>>> Running trigger-install scriptlet: info-0:7.1-3.fc41.x86_64
>>> Stop trigger-install scriptlet: info-0:7.1-3.fc41.x86_64
>>> Running trigger-install scriptlet: glib2-0:2.82.0-1.fc42.x86_64
>>> Stop trigger-install scriptlet: glib2-0:2.82.0-1.fc42.x86_64
>>> Running trigger-install scriptlet: glib2-0:2.82.0-1.fc42.x86_64
>>> Stop trigger-install scriptlet: glib2-0:2.82.0-1.fc42.x86_64
>>> Running trigger-install scriptlet: fontconfig-0:2.15.0-8.fc41.x86_64
>>> Stop trigger-install scriptlet: fontconfig-0:2.15.0-8.fc41.x86_64
>>> Running trigger-install scriptlet: shared-mime-info-0:2.3-6.fc41.x86_64
>>> Stop trigger-install scriptlet: shared-mime-info-0:2.3-6.fc41.x86_64
>>> Running trigger-install scriptlet: desktop-file-utils-0:0.27-2.fc41.x86_64
>>> Stop trigger-install scriptlet: desktop-file-utils-0:0.27-2.fc41.x86_64
Warning: skipped PGP checks for 327 package(s).
Finish: build setup for pymol-2.5.0-13.fc42.src.rpm
Start: rpmbuild pymol-2.5.0-13.fc42.src.rpm
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1725408000
Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.gNx3f6
+ umask 022
+ cd /builddir/build/BUILD/pymol-2.5.0-build
+ test -d /builddir/build/BUILD/pymol-2.5.0-build
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/pymol-2.5.0-build
+ /usr/bin/rm -rf /builddir/build/BUILD/pymol-2.5.0-build
+ /usr/bin/mkdir -p /builddir/build/BUILD/pymol-2.5.0-build
+ /usr/bin/mkdir -p /builddir/build/BUILD/pymol-2.5.0-build/SPECPARTS
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.YnwgQo
+ umask 022
+ cd /builddir/build/BUILD/pymol-2.5.0-build
+ cd /builddir/build/BUILD/pymol-2.5.0-build
+ rm -rf pymol-open-source-2.5.0
+ /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/pymol-open-source-2.5.0.tar.gz
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ cd pymol-open-source-2.5.0
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/pymol-setup.py.patch
+ /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f
+ /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/pymol-wmclass-main.patch
+ /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f
+ /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/pymol-wmclass-pmgapp.patch
+ /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f
+ /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/pymol-mmtf.patch
+ /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f
+ /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/pymol-2.5.0-bug186.patch
+ /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f
+ ln -sr modules/web modules/pymol_web
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.PbXN6b
+ umask 022
+ cd /builddir/build/BUILD/pymol-2.5.0-build
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd pymol-open-source-2.5.0
+ export 'CXXFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer'
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer'
++ /usr/bin/getconf _NPROCESSORS_ONLN
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ /usr/bin/python3 setup.py build '--executable=/usr/bin/python3 -sP' --use-msgpackc=c++11 --use-openmp=yes --jobs 4
In file included from contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c:51:
contrib/uiuc/plugins/molfile_plugin/src/fastio.h: In function ‘fio_readv’:
contrib/uiuc/plugins/molfile_plugin/src/fastio.h:519:14: warning: comparison of integer expressions of different signedness: ‘fio_size_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  519 |       if (rc != iov[i].iov_len)
      |              ^~
contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c: In function ‘read_dcdheader’:
contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c:191:57: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
  191 |   } else if (input_integer[0] == 84 && input_integer[1] == dcdcordmagic) {
      |                                                         ^~
contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c:204:54: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
  204 |       if (input_integer[0] == 84 && input_integer[1] == dcdcordmagic) {
      |                                                      ^~
contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c:222:26: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
  222 |     if (input_integer[0] != dcdcordmagic) {
      |                          ^~
contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c:399:45: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
  399 |     if ((input_integer[0]+input_integer[1]) != ((*N)-(*NAMNF))*4) {
      |                                             ^~
contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c:416:45: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
  416 |     if ((input_integer[0]+input_integer[1]) != ((*N)-(*NAMNF))*4) {
      |                                             ^~
contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c: In function ‘read_dcdstep’:
contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c:621:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
  621 |         if (tmpbuf[i] != sizeof(float)*N) return DCD_BADFORMAT;
      |                       ^~
contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c:625:43: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
  625 |           if ((tmpbuf[2*i]+tmpbuf[2*i+1]) != sizeof(float)*N) return DCD_BADFORMAT;
      |                                           ^~
contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c:546:16: warning: variable ‘readlen’ set but not used [-Wunused-but-set-variable]
  546 |     fio_size_t readlen; /* number of bytes actually read            */
      |                ^~~~~~~
In file included from contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c:60:
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h: At top level:
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: ‘swap2_aligned’ defined but not used [-Wunused-function]
   96 | static void swap2_aligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: ‘swap2_unaligned’ defined but not used [-Wunused-function]
   32 | static void swap2_unaligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/fastio.h:609:12: warning: ‘fio_write_str’ defined but not used [-Wunused-function]
  609 | static int fio_write_str(fio_fd fd, const char *str) {
      |            ^~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/fastio.h:605:12: warning: ‘fio_read_int32’ defined but not used [-Wunused-function]
  605 | static int fio_read_int32(fio_fd fd, int *i) {
      |            ^~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/fastio.h:459:19: warning: ‘fio_readv’ defined but not used [-Wunused-function]
  459 | static fio_size_t fio_readv(fio_fd fd, const fio_iovec * iov, int iovcnt) {
      |                   ^~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp: In function ‘read_phi_data(void*, int, float*, float*)’:
contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp:216:14: warning: ‘strncpy’ output may be truncated copying 4 bytes from a string of length 84 [-Wstringop-truncation]
  216 |       strncpy(currNum, currChar, 4);
      |              ^
contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp: In function ‘int read_plt_data(void*, int, float*, float*)’:
contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp:143:51: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  143 |   if ( fread(datablock, sizeof(float), ndata, fd) != ndata ) {
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp: In function ‘void* open_plt_read(const char*, const char*, int*)’:
contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp:69:8: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   69 |   fread(intHeader, sizeof(int), 5, fd);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp:82:8: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   82 |   fread(floatHeader, sizeof(float), 6, fd);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp:42:
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h: At global scope:
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124:13: warning: ‘void swap8_aligned(void*, long int)’ defined but not used [-Wunused-function]
  124 | static void swap8_aligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: ‘void swap2_aligned(void*, long int)’ defined but not used [-Wunused-function]
   96 | static void swap2_aligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: ‘void swap8_unaligned(void*, long int)’ defined but not used [-Wunused-function]
   65 | static void swap8_unaligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: ‘void swap4_unaligned(void*, long int)’ defined but not used [-Wunused-function]
   46 | static void swap4_unaligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: ‘void swap2_unaligned(void*, long int)’ defined but not used [-Wunused-function]
   32 | static void swap2_unaligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~~~
In file included from contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp:30:
contrib/uiuc/plugins/molfile_plugin/src/ply_c.h: In function ‘void put_element_ply(PlyFile*, void*)’:
contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:459:7: warning: unused variable ‘i’ [-Wunused-variable]
  459 |   int i,j,k;
      |       ^
contrib/uiuc/plugins/molfile_plugin/src/ply_c.h: In function ‘void ascii_get_element(PlyFile*, char*)’:
contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1407:7: warning: unused variable ‘i’ [-Wunused-variable]
 1407 |   int i,j,k;
      |       ^
contrib/uiuc/plugins/molfile_plugin/src/ply_c.h: In function ‘void binary_get_element(PlyFile*, char*)’:
contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1541:7: warning: unused variable ‘i’ [-Wunused-variable]
 1541 |   int i,j,k;
      |       ^
contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp: In function ‘int read_rawgraphics(void*, int*, const molfile_graphics_t**)’:
contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp:107:17: warning: variable ‘vert_other’ set but not used [-Wunused-but-set-variable]
  107 |   PlyOtherProp *vert_other=NULL;
      |                 ^~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp:108:17: warning: variable ‘face_other’ set but not used [-Wunused-but-set-variable]
  108 |   PlyOtherProp *face_other=NULL;
      |                 ^~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ply_c.h: In function ‘void binary_get_element(PlyFile*, char*)’:
contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1629:13: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
 1629 |       fread (&len, sizeof(int), 1, fp);
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1631:13: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
 1631 |       fread (str, len, 1, fp);
      |       ~~~~~~^~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ply_c.h: In function ‘void get_binary_item(FILE*, int, int*, unsigned int*, double*)’:
contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:2057:13: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
 2057 |       fread (ptr, 1, 1, fp);
      |       ~~~~~~^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:2063:13: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
 2063 |       fread (ptr, 1, 1, fp);
      |       ~~~~~~^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:2069:13: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
 2069 |       fread (ptr, 2, 1, fp);
      |       ~~~~~~^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:2075:13: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
 2075 |       fread (ptr, 2, 1, fp);
      |       ~~~~~~^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:2081:13: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
 2081 |       fread (ptr, 4, 1, fp);
      |       ~~~~~~^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:2087:13: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
 2087 |       fread (ptr, 4, 1, fp);
      |       ~~~~~~^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:2093:13: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
 2093 |       fread (ptr, 4, 1, fp);
      |       ~~~~~~^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:2099:13: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
 2099 |       fread (ptr, 8, 1, fp);
      |       ~~~~~~^~~~~~~~~~~~~~~
In file included from contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp:27:
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h: At global scope:
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124:13: warning: ‘void swap8_aligned(void*, long int)’ defined but not used [-Wunused-function]
  124 | static void swap8_aligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:110:13: warning: ‘void swap4_aligned(void*, long int)’ defined but not used [-Wunused-function]
  110 | static void swap4_aligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: ‘void swap2_aligned(void*, long int)’ defined but not used [-Wunused-function]
   96 | static void swap2_aligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: ‘void swap8_unaligned(void*, long int)’ defined but not used [-Wunused-function]
   65 | static void swap8_unaligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: ‘void swap4_unaligned(void*, long int)’ defined but not used [-Wunused-function]
   46 | static void swap4_unaligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: ‘void swap2_unaligned(void*, long int)’ defined but not used [-Wunused-function]
   32 | static void swap2_unaligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c: In function ‘read_dlpoly_config_structure’:
contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c:292:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
  292 |   if (NULL == fgets(fbuffer, 1024, data->file))
      |   ^~
contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c:295:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
  295 |     if (NULL == fgets(fbuffer, 1024, data->file))
      |     ^~
contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp: In function ‘int {anonymous}::write_structure(void*, int, const molfile_atom_t*)’:
contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp:1904:9: warning: unused variable ‘last_ctnumber’ [-Wunused-variable]
 1904 |     int last_ctnumber = -1;
      |         ^~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c: In function ‘read_dlpoly_config_timestep’:
contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c:669:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  669 |   fgets(fbuffer, 1024, data->file);
      |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c: In function ‘read_dlpoly_timestep’:
contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c:554:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  554 |   fgets(fbuffer, 1024, data->file);
      |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ply_c.h: In function ‘recreate_command_line’:
contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1334:11: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=]
 1334 |   line[0] = '\0';
      |   ~~~~~~~~^~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1333:26: note: destination object of size 0 allocated by ‘malloc’
 1333 |   line = (char *) malloc (sizeof(char) * len);
      |                   ~~~~~~~^~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c: In function ‘read_dlpoly_config_structure’:
contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c:362:5: warning: ‘strncpy’ output may be truncated copying 16 bytes from a string of length 4095 [-Wstringop-truncation]
  362 |     strncpy(atom->name, buf, sizeof(atom->name));
      |     ^
contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c: In function ‘read_dlpoly_structure’:
contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c:267:5: warning: ‘strncpy’ output may be truncated copying 16 bytes from a string of length 4095 [-Wstringop-truncation]
  267 |     strncpy(atom->name, buf, sizeof(atom->name));
      |     ^
contrib/uiuc/plugins/molfile_plugin/src/ply_c.h: In function ‘ascii_get_element(PlyFile*, char*)’:
contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1520:14: warning: ‘other_data’ may be used uninitialized [-Wmaybe-uninitialized]
 1520 |         item = elem_data + prop->offset;
      |         ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1423:9: note: ‘other_data’ was declared here
 1423 |   char *other_data;
      |         ^~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1497:18: warning: ‘item’ may be used uninitialized [-Wmaybe-uninitialized]
 1497 |             item += item_size;
      |             ~~~~~^~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1413:20: note: ‘item’ was declared here
 1413 |   char *elem_data,*item;
      |                    ^~~~
contrib/uiuc/plugins/molfile_plugin/src/ply_c.h: In function ‘binary_get_element(PlyFile*, char*)’:
contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1643:14: warning: ‘other_data’ may be used uninitialized [-Wmaybe-uninitialized]
 1643 |         item = elem_data + prop->offset;
      |         ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1555:9: note: ‘other_data’ was declared here
 1555 |   char *other_data;
      |         ^~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1620:18: warning: ‘item’ may be used uninitialized [-Wmaybe-uninitialized]
 1620 |             item += item_size;
      |             ~~~~~^~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1546:9: note: ‘item’ was declared here
 1546 |   char *item;
      |         ^~~~
contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp: In function ‘int read_dsn6_data(void*, int, float*, float*)’:
contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp:233:14: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  233 |         fread(brick, sizeof(char), 512, fd);
      |         ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp: In function ‘void* open_dsn6_read(const char*, const char*, int*)’:
contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp:91:8: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   91 |   fread(fileHeader, sizeof(short), 19, fd);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp:63:
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h: At global scope:
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124:13: warning: ‘void swap8_aligned(void*, long int)’ defined but not used [-Wunused-function]
  124 | static void swap8_aligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:110:13: warning: ‘void swap4_aligned(void*, long int)’ defined but not used [-Wunused-function]
  110 | static void swap4_aligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: ‘void swap8_unaligned(void*, long int)’ defined but not used [-Wunused-function]
   65 | static void swap8_unaligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: ‘void swap4_unaligned(void*, long int)’ defined but not used [-Wunused-function]
   46 | static void swap4_unaligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~~~
contrib/mmtf-c/mmtf_parser.cpp: In function ‘bool MMTF_unpack_from_file(const char*, MMTF_container*)’:
contrib/mmtf-c/mmtf_parser.cpp:1075:10: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
 1075 |     fread(buffer, fileLen, 1, file);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c: In function ‘get_atom_radius’:
contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c:166:16: warning: variable ‘type’ set but not used [-Wunused-but-set-variable]
  166 |   char *name, *type;
      |                ^~~~
contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c:166:9: warning: variable ‘name’ set but not used [-Wunused-but-set-variable]
  166 |   char *name, *type;
      |         ^~~~
contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c: In function ‘read_pqr_timestep’:
contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c:109:3: warning: ‘strncpy’ output may be truncated copying 80 bytes from a string of length 81 [-Wstringop-truncation]
  109 |   strncpy(tmp, record, PQR_RECORD_LENGTH);
      |   ^
contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c: In function ‘read_pqr_structure’:
contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c:137:3: warning: ‘strncpy’ output may be truncated copying 4 bytes from a string of length 68 [-Wstringop-truncation]
  137 |   strncpy(name, record+12, 4);    name[4] = 0;
      |   ^
contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c:138:3: warning: ‘strncpy’ output may be truncated copying 4 bytes from a string of length 63 [-Wstringop-truncation]
  138 |   strncpy(resname, record+17, 4); resname[4] = 0;
      |   ^
contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c:139:3: warning: ‘strncpy’ output may be truncated copying 1 byte from a string of length 59 [-Wstringop-truncation]
  139 |   strncpy(chain, record+21, 1);   chain[1] = 0;
      |   ^
contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c:140:3: warning: ‘strncpy’ output may be truncated copying 4 bytes from a string of length 58 [-Wstringop-truncation]
  140 |   strncpy(resid, record+22, 4);   resid[4] = 0;
      |   ^
contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c: In function ‘write_psf_structure’:
contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c:782:33: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  782 |       if (strlen(atoms[i].type) > fw) {
      |                                 ^
In file included from contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c:30:
contrib/uiuc/plugins/molfile_plugin/src/fortread.h: At top level:
contrib/uiuc/plugins/molfile_plugin/src/fortread.h:103:12: warning: ‘fortread_4’ defined but not used [-Wunused-function]
  103 | static int fortread_4(void *dest, int n, int swap, FILE *fd) {
      |            ^~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/fortread.h:55:12: warning: ‘fort_get_endian_reclen’ defined but not used [-Wunused-function]
   55 | static int fort_get_endian_reclen(int reclen, int word0, int word1,
      |            ^~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/fortread.h:36:12: warning: ‘fort_eat_recmark’ defined but not used [-Wunused-function]
   36 | static int fort_eat_recmark(FILE *ifp, int recmarklen) {
      |            ^~~~~~~~~~~~~~~~
In file included from contrib/uiuc/plugins/molfile_plugin/src/fortread.h:28:
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124:13: warning: ‘swap8_aligned’ defined but not used [-Wunused-function]
  124 | static void swap8_aligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: ‘swap2_aligned’ defined but not used [-Wunused-function]
   96 | static void swap2_aligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: ‘swap8_unaligned’ defined but not used [-Wunused-function]
   65 | static void swap8_unaligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: ‘swap4_unaligned’ defined but not used [-Wunused-function]
   46 | static void swap4_unaligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: ‘swap2_unaligned’ defined but not used [-Wunused-function]
   32 | static void swap2_unaligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~~~
contrib/mmtf-c/mmtf_parser.cpp: In function ‘MMTF_parser_fetch_typed_array(msgpack::v2::object const*, unsigned long*, int)’:
contrib/mmtf-c/mmtf_parser.cpp:869:5: warning: ‘typecheck’ may be used uninitialized [-Wmaybe-uninitialized]
  869 |     if (typecode != typecheck) {
      |     ^~
contrib/mmtf-c/mmtf_parser.cpp:864:9: note: ‘typecheck’ was declared here
  864 |     int typecheck;
      |         ^~~~~~~~~
In file included from contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:71:
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124:13: warning: ‘void swap8_aligned(void*, long int)’ defined but not used [-Wunused-function]
  124 | static void swap8_aligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:110:13: warning: ‘void swap4_aligned(void*, long int)’ defined but not used [-Wunused-function]
  110 | static void swap4_aligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: ‘void swap2_aligned(void*, long int)’ defined but not used [-Wunused-function]
   96 | static void swap2_aligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: ‘void swap2_unaligned(void*, long int)’ defined but not used [-Wunused-function]
   32 | static void swap2_unaligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~~~
In file included from contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:70:
contrib/uiuc/plugins/molfile_plugin/src/vmddir.h:145:12: warning: ‘int vmd_file_is_executable(const char*)’ defined but not used [-Wunused-function]
  145 | static int vmd_file_is_executable(const char * filename) {
      |            ^~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp: In function ‘(anonymous namespace)::read_structure(void*, int*, molfile_atom_t*)’:
contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp:1786:22: warning: ‘strncpy’ specified bound 16 equals destination size [-Wstringop-truncation]
 1786 |               strncpy( ct.particles[to].type, v->second.funct.c_str(),
      |                      ^
contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c: In function ‘open_rst_read’:
contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c:48:11: warning: variable ‘timesteprst’ set but not used [-Wunused-but-set-variable]
   48 |   double  timesteprst;
      |           ^~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c:67:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   67 |   fgets(title, 82, fd);
      |   ^~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c:70:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   70 |   fgets(line, 82, fd);
      |   ^~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c: In function ‘PlugIOManagerInitAll’:
contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c:271:1: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
  271 | if(ok) ok = ok && (molfile_xyzplugin_init() == VMDPLUGIN_SUCCESS);
      | ^~
contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c:273:8: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
  273 |        if(ok) {
      |        ^~
contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c: In function ‘PlugIOManagerFreeAll’:
contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c:411:1: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
  411 | if(ok) ok = ok && (molfile_xyzplugin_fini() == VMDPLUGIN_SUCCESS);
      | ^~
contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c:413:8: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
  413 |        return ok;
      |        ^~~~~~
contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c: In function ‘abinit_readline’:
contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c:279:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  279 |     for (i = 0; i < strlen(line); ++i) {
      |                   ^
contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c: In function ‘DEN_read_volumetric_data’:
contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c:970:5: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  970 |     fread(recordmarker, 1, data->hdr->bintype.recordmarker, data->file);
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c:971:5: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  971 |     fread(recordmarker, 1, data->hdr->bintype.recordmarker, data->file);
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c: In function ‘POT_read_volumetric_data’:
contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c:1113:5: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
 1113 |     fread(recordmarker, 1, data->hdr->bintype.recordmarker, data->file);
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c:1114:5: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
 1114 |     fread(recordmarker, 1, data->hdr->bintype.recordmarker, data->file);
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp: In function ‘int read_spider_data(void*, int, float*, float*)’:
contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp:286:8: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  286 |   fread(datablock, total * sizeof(float), 1, fd);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp:36:
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h: At global scope:
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124:13: warning: ‘void swap8_aligned(void*, long int)’ defined but not used [-Wunused-function]
  124 | static void swap8_aligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c: In function ‘abinit_header’:
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: ‘void swap2_aligned(void*, long int)’ defined but not used [-Wunused-function]
   96 | static void swap2_aligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: ‘void swap8_unaligned(void*, long int)’ defined but not used [-Wunused-function]
   65 | static void swap8_unaligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c:1511:3: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
 1511 |   fread(skip, 1, 8, fp);
      |   ^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: ‘void swap4_unaligned(void*, long int)’ defined but not used [-Wunused-function]
   46 | static void swap4_unaligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: ‘void swap2_unaligned(void*, long int)’ defined but not used [-Wunused-function]
   32 | static void swap2_unaligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c: In function ‘GEO_read_next_timestep’:
contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c:619:5: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  619 |     fscanf(data->file, "%*s %f %f %f", &x, &y, &z);
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c:70:
contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h: At top level:
contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: ‘get_pte_idx_from_string’ defined but not used [-Wunused-function]
  160 | static int get_pte_idx_from_string(const char *label) {
      |            ^~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp: In function ‘int read_rawgraphics(void*, int*, const molfile_graphics_t**)’:
contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp:96:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   96 |     fgets(line, 80, infile);
      |     ~~~~~^~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp:104:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  104 |     fgets(line, 80, infile);
      |     ~~~~~^~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp:119:12: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  119 |       fgets(line, 80, infile);
      |       ~~~~~^~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp:131:14: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  131 |         fgets(line, 80, infile);
      |         ~~~~~^~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp:153:12: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  153 |       fgets(line, 80, infile);
      |       ~~~~~^~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp:162:12: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  162 |       fgets(line, 80, infile);
      |       ~~~~~^~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp:171:12: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  171 |       fgets(line, 80, infile);
      |       ~~~~~^~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c: In function ‘read_tinker_structure’:
contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c:103:5: warning: ‘strncpy’ output may be truncated copying 16 bytes from a string of length 1023 [-Wstringop-truncation]
  103 |     strncpy(atom->name, buffer, sizeof(atom->name));
      |     ^
contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp: In function ‘void* open_uhbd_read(const char*, const char*, int*)’:
contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp:90:22: warning: variable ‘o’ set but not used [-Wunused-but-set-variable]
   90 |   float orig[3], ra, o[3], s[3]; //xdelta[3], ydelta[3], zdelta[3];
      |                      ^
contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp:90:28: warning: variable ‘s’ set but not used [-Wunused-but-set-variable]
   90 |   float orig[3], ra, o[3], s[3]; //xdelta[3], ydelta[3], zdelta[3];
      |                            ^
contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp: In function ‘int read_uhbd_data(void*, int, float*, float*)’:
contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp:254:66: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  254 |       if (fread(datablock + z*xysize, sizeof(float), xysize, fd) != xysize) {
      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp: In function ‘void* open_uhbd_read(const char*, const char*, int*)’:
contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp:102:8: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  102 |   fread(&headersize, sizeof(int), 1, fd);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp:47:
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h: At global scope:
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124:13: warning: ‘void swap8_aligned(void*, long int)’ defined but not used [-Wunused-function]
  124 | static void swap8_aligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: ‘void swap2_aligned(void*, long int)’ defined but not used [-Wunused-function]
   96 | static void swap2_aligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: ‘void swap8_unaligned(void*, long int)’ defined but not used [-Wunused-function]
   65 | static void swap8_unaligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: ‘void swap2_unaligned(void*, long int)’ defined but not used [-Wunused-function]
   32 | static void swap2_unaligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp: In member function ‘(anonymous namespace)::AtomArray::insert_row(std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > > const&)’:
contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp:886:16: warning: ‘strncpy’ specified bound 16 equals destination size [-Wstringop-truncation]
  886 |         strncpy( a.name,
      |                ^
contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c: In function ‘read_vasp5xdatcar_timestep’:
contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c:224:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  224 |     fgets(lineptr, LINESIZE, data->file);
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c: In function ‘read_vasp5xdatcar_structure’:
contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c:174:27: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  174 |   for (i = 0; i < 2; ++i) fgets(lineptr, LINESIZE, data->file);
      |                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c:180:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  180 |     fgets(lineptr, LINESIZE, data->file);
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c:189:26: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  189 |  for (i = 0; i < 3; ++i) fgets(lineptr, LINESIZE, data->file);
      |                          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c:194:4: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  194 |    fgets(lineptr, LINESIZE, data->file);
      |    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c:204:26: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  204 |  for (i = 0; i < 8; ++i) fgets(lineptr, LINESIZE, data->file);
      |                          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c: In function ‘open_vasp5xdatcar_read’:
contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c:69:27: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   69 |   for (i = 0; i < 5; ++i) fgets(lineptr, LINESIZE, data->file);
      |                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c:72:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   72 |   fgets(lineptr, LINESIZE, data->file);
      |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c:77:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   77 |   fgets(lineptr, LINESIZE, data->file);
      |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c:40:
contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h: At top level:
contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: ‘get_pte_idx_from_string’ defined but not used [-Wunused-function]
  160 | static int get_pte_idx_from_string(const char *label) {
      |            ^~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c: In function ‘read_vaspchgcar_data’:
contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c:237:60: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  237 |   for (n = 0; n < data->numatoms + data->version + 5; ++n) fgets(lineptr, LINESIZE, data->file);
      |                                                            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c:282:7: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  282 |       fgets(lineptr, LINESIZE, data->file);
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c: In function ‘read_vaspchgcar_metadata’:
contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c:150:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  150 |   fgets(lineptr, LINESIZE, data->file);
      |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c: In function ‘open_vaspchgcar_read’:
contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c:71:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   71 |   fgets(lineptr, LINESIZE, data->file);
      |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c:75:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   75 |   fgets(lineptr, LINESIZE, data->file);
      |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c:81:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   81 |     fgets(lineptr, LINESIZE, data->file);
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c:92:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   92 |   fgets(lineptr, LINESIZE, data->file);
      |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c:103:7: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  103 |       fgets(lineptr, LINESIZE, data->file);
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c:131:44: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  131 |   for (i = 0; i < data->numatoms + 2; ++i) fgets(lineptr, LINESIZE, data->file);
      |                                            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c:41:
contrib/uiuc/plugins/molfile_plugin/src/vaspplugin.h: At top level:
contrib/uiuc/plugins/molfile_plugin/src/vaspplugin.h:111:13: warning: ‘vasp_timestep_unitcell’ defined but not used [-Wunused-function]
  111 | static void vasp_timestep_unitcell(molfile_timestep_t *ts, vasp_plugindata_t *data)
      |             ^~~~~~~~~~~~~~~~~~~~~~
In file included from contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c:42:
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h: In function ‘angular_momentum_expon’:
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:545:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  545 |   for (i=0; i<strlen(ang_mom_str); i++) {
      |              ^
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h: At top level:
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:1097:13: warning: ‘whereami’ defined but not used [-Wunused-function]
 1097 | static void whereami(FILE *file) {
      |             ^~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:1077:13: warning: ‘thisline’ defined but not used [-Wunused-function]
 1077 | static void thisline(FILE *file) {
      |             ^~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:1028:12: warning: ‘fpexpftoc’ defined but not used [-Wunused-function]
 1028 | static int fpexpftoc(char *ftocstr) {
      |            ^~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:1006:12: warning: ‘have_keyline’ defined but not used [-Wunused-function]
 1006 | static int have_keyline(FILE *file, const char *keystring1,
      |            ^~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:962:12: warning: ‘goto_keyline’ defined but not used [-Wunused-function]
  962 | static int goto_keyline(FILE *file, ...) {
      |            ^~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:901:14: warning: ‘strtoupper’ defined but not used [-Wunused-function]
  901 | static char *strtoupper(char *s) {
      |              ^~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:895:12: warning: ‘iswhiteline’ defined but not used [-Wunused-function]
  895 | static int iswhiteline(char *s) {
      |            ^~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:846:13: warning: ‘eatwhitelines’ defined but not used [-Wunused-function]
  846 | static void eatwhitelines(FILE *file) {
      |             ^~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:835:13: warning: ‘eatline’ defined but not used [-Wunused-function]
  835 | static void eatline(FILE * fd, int n)
      |             ^~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:711:12: warning: ‘symmetry_expand’ defined but not used [-Wunused-function]
  711 | static int symmetry_expand(qm_atom_t **atoms, int numunique, int natoms,
      |            ^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:585:13: warning: ‘print_matrix4’ defined but not used [-Wunused-function]
  585 | static void print_matrix4(const float mat[16]) {
      |             ^~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:540:13: warning: ‘angular_momentum_expon’ defined but not used [-Wunused-function]
  540 | static void angular_momentum_expon(int  *ang_mom_expon,
      |             ^~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:507:13: warning: ‘del_wavefunction’ defined but not used [-Wunused-function]
  507 | static void del_wavefunction(qm_timestep_t *ts) {
      |             ^~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:490:13: warning: ‘replace_wavefunction’ defined but not used [-Wunused-function]
  490 | static void replace_wavefunction(qm_timestep_t *ts, int n) {
      |             ^~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:471:27: warning: ‘add_wavefunction’ defined but not used [-Wunused-function]
  471 | static qm_wavefunction_t* add_wavefunction(qm_timestep_t *ts) {
      |                           ^~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:437:18: warning: ‘init_qmdata’ defined but not used [-Wunused-function]
  437 | static qmdata_t* init_qmdata() {
      |                  ^~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c: In function ‘read_vaspoutcar_timestep’:
contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c:239:7: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  239 |       fgets(lineptr, LINESIZE, data->file);
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c:242:9: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  242 |         fgets(lineptr, LINESIZE, data->file);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c: In function ‘read_vaspoutcar_structure’:
contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c:204:9: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  204 |         fgets(lineptr, LINESIZE, data->file);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c: In function ‘open_vaspoutcar_read’:
contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c:87:10: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   87 |          fgets(lineptr, LINESIZE, data->file);
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c:40:
contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h: At top level:
contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: ‘get_pte_idx_from_string’ defined but not used [-Wunused-function]
  160 | static int get_pte_idx_from_string(const char *label) {
      |            ^~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp: In function ‘int read_bgf_timestep(void*, int, molfile_timestep_t*)’:
contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp:243:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  243 |     fgets(line, LINESIZE, bgf->file);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp:252:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  252 |     fgets(line, LINESIZE, bgf->file);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp: In function ‘int read_bgf_bonds_aux(void*, int*, int**, int**, float**)’:
contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp:328:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  328 |     fgets(line, LINESIZE, bgf->file);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp:346:8: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  346 |   fgets(line, LINESIZE, bgf->file);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp:355:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  355 |     fgets(nextline, LINESIZE, bgf->file);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp:419:14: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  419 |         fgets(line, LINESIZE, bgf->file);
      |         ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp: In function ‘int read_bgf_structure(void*, int*, molfile_atom_t*)’:
contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp:194:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  194 |     fgets(line, LINESIZE, bgf->file);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp:203:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  203 |     fgets(line, LINESIZE, bgf->file);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp: In function ‘void* open_bgf_read(const char*, const char*, int*)’:
contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp:59:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   59 |     fgets(line, LINESIZE, fd);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c: In function ‘read_vaspparchg_data’:
contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c:238:60: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  238 |   for (n = 0; n < data->numatoms + data->version + 5; ++n) fgets(lineptr, LINESIZE, data->file);
      |                                                            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c: In function ‘read_vaspparchg_metadata’:
contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c:150:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  150 |   fgets(lineptr, LINESIZE, data->file);
      |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c: In function ‘open_vaspparchg_read’:
contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c:71:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   71 |   fgets(lineptr, LINESIZE, data->file);
      |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c:75:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   75 |   fgets(lineptr, LINESIZE, data->file);
      |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c:81:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   81 |     fgets(lineptr, LINESIZE, data->file);
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c:92:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   92 |   fgets(lineptr, LINESIZE, data->file);
      |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c:103:7: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  103 |       fgets(lineptr, LINESIZE, data->file);
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c:131:44: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  131 |   for (i = 0; i < data->numatoms + 2; ++i) fgets(lineptr, LINESIZE, data->file);
      |                                            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c:41:
contrib/uiuc/plugins/molfile_plugin/src/vaspplugin.h: At top level:
contrib/uiuc/plugins/molfile_plugin/src/vaspplugin.h:111:13: warning: ‘vasp_timestep_unitcell’ defined but not used [-Wunused-function]
  111 | static void vasp_timestep_unitcell(molfile_timestep_t *ts, vasp_plugindata_t *data)
      |             ^~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp: In function ‘read_bgf_timestep(void*, int, molfile_timestep_t*)’:
contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp:120:12: warning: ‘strncpy’ output may be truncated copying 10 bytes from a string of length 224 [-Wstringop-truncation]
  120 |     strncpy(numstr, record + 31, 10);
      |            ^
contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp:125:12: warning: ‘strncpy’ output may be truncated copying 10 bytes from a string of length 214 [-Wstringop-truncation]
  125 |     strncpy(numstr+10, record + 41, 10);
      |            ^
contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp:130:12: warning: ‘strncpy’ output may be truncated copying 10 bytes from a string of length 204 [-Wstringop-truncation]
  130 |     strncpy(numstr+20, record + 51, 10);
      |            ^
contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp: In function ‘read_bgf_structure(void*, int*, molfile_atom_t*)’:
contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp:144:10: warning: ‘strncpy’ output may be truncated copying 5 bytes from a string of length 242 [-Wstringop-truncation]
  144 |   strncpy(name, record + 13, 5);
      |          ^
contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c: In function ‘write_vaspposcar_timestep’:
contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c:360:40: warning: argument to ‘sizeof’ in ‘strncpy’ call is the same expression as the source; did you mean to use the size of the destination? [-Wsizeof-pointer-memaccess]
  360 |     strncpy(tmptype, atom->type, sizeof(atom->type));
      |                                        ^
contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp:149:10: warning: ‘strncpy’ output may be truncated copying 4 bytes from a string of length 236 [-Wstringop-truncation]
  149 |   strncpy(resname, record + 19, 4);
      |          ^
contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp:167:10: warning: ‘strncpy’ output may be truncated copying 5 bytes from a string of length 194 [-Wstringop-truncation]
  167 |   strncpy(type, record+61, 5);
      |          ^
contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c: In function ‘read_vaspposcar_timestep’:
contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c:232:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  232 |   fgets(lineptr, LINESIZE, data->file);
      |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c:237:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  237 |     fgets(lineptr, LINESIZE, data->file);
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c:246:43: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  246 |   for (i = 0; i < data->version - 2; ++i) fgets(lineptr, LINESIZE, data->file);
      |                                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c:249:35: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  249 |   if (tolower(lineptr[0]) == 's') fgets(lineptr, LINESIZE, data->file);
      |                                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c:256:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  256 |     fgets(lineptr, LINESIZE, data->file);
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c: In function ‘read_vaspposcar_structure’:
contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c:195:42: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  195 |  for (i = 0; i < data->version + 3; ++i) fgets(lineptr, LINESIZE, data->file);
      |                                          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c:198:34: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  198 |  if (tolower(lineptr[0]) == 's') fgets(lineptr, LINESIZE, data->file);
      |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c:203:4: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  203 |    fgets(lineptr, LINESIZE, data->file);
      |    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c: In function ‘open_vaspposcar_read’:
contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c:69:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   69 |   fgets(lineptr, LINESIZE, data->file);
      |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c:73:27: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   73 |   for (i = 0; i < 5; ++i) fgets(lineptr, LINESIZE, data->file);
      |                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c:87:7: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   87 |       fgets(lineptr, LINESIZE, data->file);
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c:40:
contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h: At top level:
contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: ‘get_pte_idx_from_string’ defined but not used [-Wunused-function]
  160 | static int get_pte_idx_from_string(const char *label) {
      |            ^~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c: In function ‘open_binpos_read’:
contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c:64:3: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   64 |   fread(magicchar,sizeof(char),4,fd);
      |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c:72:3: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   72 |   fread(&igarb,sizeof(int),1,fd);
      |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘DDmkdir(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, unsigned int, int, int)’:
contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:714:23: warning: ‘%03x’ directive writing between 3 and 8 bytes into a region of size 6 [-Wformat-overflow=]
  714 |         sprintf(sub, "%03x/", i);
      |                       ^~~~
contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:714:22: note: directive argument in the range [0, 2147483646]
  714 |         sprintf(sub, "%03x/", i);
      |                      ^~~~~~~
In file included from /usr/include/stdio.h:970,
                 from contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.hxx:56,
                 from contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:47:
In function ‘sprintf’,
    inlined from ‘DDmkdir(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, unsigned int, int, int)’ at contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:714:9:
/usr/include/bits/stdio2.h:30:34: note: ‘__sprintf_chk’ output between 5 and 10 bytes into a destination of size 6
   30 |   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   31 |                                   __glibc_objsize (__s), __fmt,
      |                                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   32 |                                   __va_arg_pack ());
      |                                   ~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘DDmkdir(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, unsigned int, int, int)’:
contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:722:30: warning: ‘%03x’ directive writing between 3 and 8 bytes into a region of size 6 [-Wformat-overflow=]
  722 |             sprintf(subsub, "%03x", j);
      |                              ^~~~
contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:722:29: note: directive argument in the range [0, 2147483646]
  722 |             sprintf(subsub, "%03x", j);
      |                             ^~~~~~
In function ‘sprintf’,
    inlined from ‘DDmkdir(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, unsigned int, int, int)’ at contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:722:13:
/usr/include/bits/stdio2.h:30:34: note: ‘__sprintf_chk’ output between 4 and 9 bytes into a destination of size 6
   30 |   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   31 |                                   __glibc_objsize (__s), __fmt,
      |                                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   32 |                                   __va_arg_pack ());
      |                                   ~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c: In function ‘read_vaspxdatcar_timestep’:
contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c:283:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  283 |   fgets(lineptr, LINESIZE, data->file);
      |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c: In function ‘read_vaspxdatcar_structure’:
contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c:228:27: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  228 |   for (i = 0; i < 4; ++i) fgets(lineptr, LINESIZE, data->file);
      |                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c:233:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  233 |     fgets(lineptr, LINESIZE, data->file);
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c:237:32: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  237 |       for (i = 0; i < 2; ++i)  fgets(lineptr, LINESIZE, data->file);
      |                                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c:252:44: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  252 |   for (i = 0; i < 10 - data->version; ++i) fgets(lineptr, LINESIZE, data->file);
      |                                            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c: In function ‘open_vaspxdatcar_read’:
contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c:89:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   89 |   fgets(lineptr, LINESIZE, poscar);
      |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c:92:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   92 |   fgets(lineptr, LINESIZE, poscar);
      |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c:97:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   97 |     fgets(lineptr, LINESIZE, poscar);
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c:111:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  111 |   fgets(lineptr, LINESIZE, poscar);
      |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c:121:7: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  121 |       fgets(lineptr, LINESIZE, poscar);
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c:40:
contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h: At top level:
contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: ‘get_pte_idx_from_string’ defined but not used [-Wunused-function]
  160 | static int get_pte_idx_from_string(const char *label) {
      |            ^~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp: In function ‘int read_brix_data(void*, int, float*, float*)’:
contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp:247:14: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  247 |         fread(brick, sizeof(char), 512, fd);
      |         ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp: In function ‘void* open_brix_read(const char*, const char*, int*)’:
contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp:79:9: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   79 |   fscanf(fd, "%3s", keyWord);
      |   ~~~~~~^~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp:86:9: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   86 |   fscanf(fd, " %s %d %d %d", keyWord, &org_x, &org_y, &org_z);
      |   ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp:93:9: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   93 |   fscanf(fd, " %s %d %d %d", keyWord, &ext_x, &ext_y, &ext_z);
      |   ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp:100:9: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  100 |   fscanf(fd, " %s %f %f %f", keyWord, &grid_x, &grid_y, &grid_z);
      |   ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp:109:9: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  109 |   fscanf(fd, " %s %f %f %f %f %f %f", keyWord,
      |   ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  110 |          &cell_x, &cell_y, &cell_z, &cell_alpha, &cell_beta, &cell_gamma);
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp:123:9: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  123 |   fscanf(fd, " %s %f", keyWord, &prod);
      |   ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp:128:9: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  128 |   fscanf(fd, " %s %f", keyWord, &plus);
      |   ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp:135:9: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  135 |   fscanf(fd, " %s %f", keyWord, &sigma);
      |   ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c: In function ‘read_vaspxml_structure’:
contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c:139:7: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  139 |       fgets(lineptr, LINESIZE, data->file);
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c:144:9: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  144 |         fgets(lineptr, LINESIZE, data->file);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c: In function ‘open_vaspxml_read’:
contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c:86:8: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   86 |        fgets(lineptr, LINESIZE, data->file);
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c:92:8: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   92 |        fgets(lineptr, LINESIZE, data->file);
      |        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c:47:
contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h: At top level:
contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: ‘get_pte_idx_from_string’ defined but not used [-Wunused-function]
  160 | static int get_pte_idx_from_string(const char *label) {
      |            ^~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c: In function ‘read_car_timestep’:
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:326:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  326 |     fgets(line, LINESIZE, data->file);
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:339:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  339 |     fgets(line, LINESIZE, data->file);
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:344:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  344 |     fgets(line, LINESIZE, data->file);
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:349:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  349 |   fgets(line, LINESIZE, data->file);
      |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:363:7: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  363 |       fgets(line, LINESIZE, data->file);
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:373:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  373 |     fgets(line, LINESIZE, data->file);
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c: In function ‘read_car_structure’:
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:266:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  266 |     fgets(line, LINESIZE, data->file);
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:268:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  268 |     fgets(line, LINESIZE, data->file);
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:272:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  272 |   fgets(line, LINESIZE, data->file);
      |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:295:7: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  295 |       fgets(line, LINESIZE, data->file);
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:305:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  305 |     fgets(line, LINESIZE, data->file);
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c: In function ‘open_car_read’:
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:169:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  169 |   fgets(line, LINESIZE, fd);
      |   ^~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:179:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  179 |   fgets(line, LINESIZE, fd);
      |   ^~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:182:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  182 |     fgets(line, LINESIZE, fd);
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:210:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  210 |   fgets(line, LINESIZE, fd);
      |   ^~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:213:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  213 |   fgets(line, LINESIZE, fd);
      |   ^~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:224:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  224 |     fgets(line, LINESIZE, fd);
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:226:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  226 |     fgets(line, LINESIZE, fd);
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:230:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  230 |   fgets(line, LINESIZE, fd);
      |   ^~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:234:7: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  234 |       fgets(line, LINESIZE, fd);
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:245:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  245 |     fgets(line, LINESIZE, fd);
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c: In function ‘read_car_structure’:
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:127:29: warning: ‘%d’ directive writing between 1 and 11 bytes into a region of size 8 [-Wformat-overflow=]
  127 |     sprintf(atom->resname, "%d", resid);
      |                             ^~
In function ‘read_car_structure_line’,
    inlined from ‘read_car_structure’ at contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:277:12:
contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:127:28: note: directive argument in the range [-2147483648, 9999999]
  127 |     sprintf(atom->resname, "%d", resid);
      |                            ^~~~
In file included from /usr/include/stdio.h:970,
                 from contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:85:
In function ‘sprintf’,
    inlined from ‘read_car_structure_line’ at contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:127:5,
    inlined from ‘read_car_structure’ at contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:277:12:
/usr/include/bits/stdio2.h:30:10: note: ‘__sprintf_chk’ output between 2 and 12 bytes into a destination of size 8
   30 |   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   31 |                                   __glibc_objsize (__s), __fmt,
      |                                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   32 |                                   __va_arg_pack ());
      |                                   ~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp: In function ‘int read_ccp4_data(void*, int, float*, float*)’:
contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp:495:58: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  495 |         if ( fread(rowdata, sizeof(char), extent[0], fd) != extent[0] ) {
      |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp:525:67: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  525 |         if ( fread(rowdata, sizeof(unsigned char), extent[0], fd) != extent[0] ) {
      |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp:556:58: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  556 |         if (fread(rowdata, sizeof(float), extent[0], fd) != extent[0] ) {
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp:588:58: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  588 |         if (fread(rowdata, sizeof(short), extent[0], fd) != extent[0] ) {
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp:623:67: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  623 |         if (fread(rowdata, sizeof(unsigned short), extent[0], fd) != extent[0] ) {
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp:655:60: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  655 |         if ( fread(rowdata, sizeof(uchar3), extent[0], fd) != extent[0] ) {
      |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp: In function ‘void* open_ccp4_read(const char*, const char*, int*)’:
contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp:304:12: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  304 |       fgets(symData, 81, fd);
      |       ~~~~~^~~~~~~~~~~~~~~~~
In file included from contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp:42:
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h: At global scope:
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124:13: warning: ‘void swap8_aligned(void*, long int)’ defined but not used [-Wunused-function]
  124 | static void swap8_aligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘framefile(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, unsigned long, unsigned long, int, int)’:
contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:675:35: warning: ‘__sprintf_chk’ may write a terminating nul past the end of the destination [-Wformat-overflow=]
  675 |             sprintf(answer, "%03x/", d1);
      |                                   ^
In function ‘sprintf’,
    inlined from ‘DDreldir(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, int, int)’ at contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:675:13,
    inlined from ‘framefile(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, unsigned long, unsigned long, int, int)’ at contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:779:23:
/usr/include/bits/stdio2.h:30:34: note: ‘__sprintf_chk’ output between 5 and 10 bytes into a destination of size 9
   30 |   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   31 |                                   __glibc_objsize (__s), __fmt,
      |                                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   32 |                                   __va_arg_pack ());
      |                                   ~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘framefile(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, unsigned long, unsigned long, int, int)’:
contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:673:35: warning: ‘%03x’ directive writing between 3 and 8 bytes into a region of size between 0 and 5 [-Wformat-overflow=]
  673 |             sprintf(answer, "%03x/%03x/", d1, d2);
      |                                   ^~~~
In function ‘DDreldir(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, int, int)’,
    inlined from ‘framefile(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, unsigned long, unsigned long, int, int)’ at contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:779:23:
contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:673:29: note: directive argument in the range [0, 2147483646]
  673 |             sprintf(answer, "%03x/%03x/", d1, d2);
      |                             ^~~~~~~~~~~~
In function ‘sprintf’,
    inlined from ‘DDreldir(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, int, int)’ at contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:673:13,
    inlined from ‘framefile(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, unsigned long, unsigned long, int, int)’ at contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:779:23:
/usr/include/bits/stdio2.h:30:34: note: ‘__sprintf_chk’ output between 9 and 19 bytes into a destination of size 9
   30 |   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   31 |                                   __glibc_objsize (__s), __fmt,
      |                                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   32 |                                   __va_arg_pack ());
      |                                   ~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: ‘void swap8_unaligned(void*, long int)’ defined but not used [-Wunused-function]
   65 | static void swap8_unaligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: ‘void swap4_unaligned(void*, long int)’ defined but not used [-Wunused-function]
   46 | static void swap4_unaligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: ‘void swap2_unaligned(void*, long int)’ defined but not used [-Wunused-function]
   32 | static void swap2_unaligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c: In function ‘vtf_open_file_read’:
contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c:538:9: warning: ‘__strncat_chk’ output may be truncated copying 200 bytes from a string of length 254 [-Wstringop-truncation]
  538 |         strncat(msg, keyword, 200);
      |         ^
contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c:629:7: warning: ‘__strncat_chk’ output may be truncated copying 200 bytes from a string of length 254 [-Wstringop-truncation]
  629 |       strncat(msg, keyword, 200);
      |       ^
contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp: In function ‘open_ccp4_read(char const*, char const*, int*)’:
contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp:279:3: warning: ‘dataOffset’ may be used uninitialized [-Wmaybe-uninitialized]
  279 |   if (dataOffset != (CCP4HDSIZE + symBytes)) {
      |   ^~
contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp:89:8: note: ‘dataOffset’ was declared here
   89 |   long dataOffset, filesize;
      |        ^~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c: In function ‘vtf_read_bonds’:
contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c:147:48: warning: ‘%s’ directive argument is null [-Wformat-overflow=]
  147 |   sprintf(message, "vtfplugin:%d: error: %s: \"%s\"\n",
      |                                                ^~
contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp: In function ‘int read_vtk_data(void*, int, float*, float*)’:
contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp:276:45: warning: variable ‘total’ set but not used [-Wunused-but-set-variable]
  276 |   int x, y, z, xsize, ysize, zsize, xysize, total;
      |                                             ^~~~~
contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp: In function ‘int read_vtk_data_ex(void*, molfile_volumetric_readwrite_t*)’:
contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp:338:45: warning: variable ‘total’ set but not used [-Wunused-but-set-variable]
  338 |   int x, y, z, xsize, ysize, zsize, xysize, total;
      |                                             ^~~~~
contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp:371:15: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  371 |         fscanf(fd, "%lf %lf %lf", &vx, &vy, &vz);
      |         ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp: In function ‘int read_vtk_data(void*, int, float*, float*)’:
contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp:306:15: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  306 |         fscanf(fd, "%lf %lf %lf", &vx, &vy, &vz);
      |         ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp:72:
contrib/uiuc/plugins/include/vmdconio.h: At global scope:
contrib/uiuc/plugins/include/vmdconio.h:56:12: warning: ‘int vmdcon_printf(int, const char*, ...)’ defined but not used [-Wunused-function]
   56 | static int vmdcon_printf(int lvl, const char *fmt, ...) {
      |            ^~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp: In function ‘int read_mdf_bonds(void*, int*, int**, int**, float**, int**, int*, char***)’:
contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp:278:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  278 |     fgets(line, LINESIZE, mdf->file);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp:297:12: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  297 |       fgets(line, LINESIZE, mdf->file);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp:319:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  319 |     fgets(line, LINESIZE, mdf->file);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp:357:12: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  357 |       fgets(line, LINESIZE, mdf->file);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp: In function ‘int read_mdf_structure(void*, int*, molfile_atom_t*)’:
contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp:223:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  223 |     fgets(line, LINESIZE, mdf->file);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp:241:12: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  241 |       fgets(line, LINESIZE, mdf->file);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp: In function ‘void* open_mdf_read(const char*, const char*, int*)’:
contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp:164:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  164 |     fgets(line, LINESIZE, fd);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp:176:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  176 |     fgets(line, LINESIZE, fd);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp:183:12: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  183 |       fgets(line, LINESIZE, fd);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp: In function ‘open_vtk_read(char const*, char const*, int*)’:
contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp:152:10: warning: ‘strncpy’ output may be truncated copying 256 bytes from a string of length 2039 [-Wstringop-truncation]
  152 |   strncpy(vtk->title, inbuf, sizeof(vtk->title) - 1);
      |          ^
contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp: In function ‘int read_xbgf_timestep(void*, int, molfile_timestep_t*)’:
contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp:288:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  288 |     fgets(line, LINESIZE, bgf->file);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp:297:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  297 |     fgets(line, LINESIZE, bgf->file);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp: In function ‘int read_xbgf_bonds_aux(void*, int*, int**, int**, float**)’:
contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp:365:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  365 |     fgets(line, LINESIZE, bgf->file);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp:387:8: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  387 |   fgets(line, LINESIZE, bgf->file);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp:395:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  395 |     fgets(nextline, LINESIZE, bgf->file);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp:455:14: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  455 |         fgets(line, LINESIZE, bgf->file);
      |         ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp: In function ‘int read_xbgf_structure(void*, int*, molfile_atom_t*)’:
contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp:241:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  241 |     fgets(line, LINESIZE, bgf->file);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp:250:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  250 |     fgets(line, LINESIZE, bgf->file);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp: In function ‘void* open_xbgf_read(const char*, const char*, int*)’:
contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp:72:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   72 |     fgets(line, LINESIZE, fd);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp: In function ‘void* open_cube_read(const char*, const char*, int*)’:
contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:175:8: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  175 |   fgets(readbuf, 1023, cube->fd);    // go on to next line
      |   ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:181:8: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  181 |   fgets(readbuf, 1023, cube->fd); // skip second header line
      |   ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:326:12: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  326 |       fgets(readbuf, 1023, cube->fd);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:337:12: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  337 |       fgets(readbuf, 1023, cube->fd);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:339:11: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  339 |     fscanf(cube->fd, "%d", &cube->nsets);
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:344:13: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  344 |       fscanf(cube->fd, "%d", &orb);
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:349:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  349 |     fgets(readbuf, 1023, cube->fd);  // gobble up rest of line
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp: At global scope:
contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:107:13: warning: ‘void cube_buildrotmat(cube_t*, float*, float*, float*)’ defined but not used [-Wunused-function]
  107 | static void cube_buildrotmat(cube_t *cube, float *o, float *a, float *b)
      |             ^~~~~~~~~~~~~~~~
In file included from contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:42:
contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: ‘int get_pte_idx_from_string(const char*)’ defined but not used [-Wunused-function]
  160 | static int get_pte_idx_from_string(const char *label) {
      |            ^~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:133:12: warning: ‘int get_pte_idx(const char*)’ defined but not used [-Wunused-function]
  133 | static int get_pte_idx(const char *label)
      |            ^~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp: In function ‘int read_mol2_timestep(void*, int, molfile_timestep_t*)’:
contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp:275:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  275 |     fgets(line, LINESIZE, mol2->file);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp:289:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  289 |     fgets(line, LINESIZE, mol2->file);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp: In function ‘int read_mol2_bonds_aux(void*, int*, int**, int**, float**)’:
contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp:199:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  199 |     fgets(line, LINESIZE, mol2->file);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp:209:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  209 |     fgets(line, LINESIZE, mol2->file);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp: In function ‘int read_mol2(void*, int*, molfile_atom_t*)’:
contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp:127:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  127 |     fgets(line, LINESIZE, mol2->file);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp:138:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  138 |     fgets(line, LINESIZE, mol2->file);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp: In function ‘void* open_mol2_read(const char*, const char*, int*)’:
contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp:74:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   74 |     fgets(line, LINESIZE, fd);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp:81:8: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   81 |   fgets(line, LINESIZE, fd);  // Read and ignore the mol_name
      |   ~~~~~^~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp:82:8: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   82 |   fgets(line, LINESIZE, fd);  // Read the molecule info
      |   ~~~~~^~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp:91:8: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   91 |   fgets(line, LINESIZE, fd);  // Read and ignore the mol_type
      |   ~~~~~^~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp:92:8: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   92 |   fgets(line, LINESIZE, fd);  // Read the charge_type
      |   ~~~~~^~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp: In function ‘open_cube_read(char const*, char const*, int*)’:
contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:179:10: warning: ‘__strncat_chk’ output may be truncated copying 240 bytes from a string of length 1023 [-Wstringop-truncation]
  179 |   strncat(voltmpl.dataname, readbuf, 240);      // 240 is max space left after
      |          ^
contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp: In function ‘read_xbgf_timestep(void*, int, molfile_timestep_t*)’:
contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp:143:12: warning: ‘strncpy’ output may be truncated copying 10 bytes from a string of length 223 [-Wstringop-truncation]
  143 |     strncpy(numstr, record + 32, 10);
      |            ^
contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp:148:12: warning: ‘strncpy’ output may be truncated copying 10 bytes from a string of length 213 [-Wstringop-truncation]
  148 |     strncpy(numstr+10, record + 42, 10);
      |            ^
contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp:153:12: warning: ‘strncpy’ output may be truncated copying 10 bytes from a string of length 203 [-Wstringop-truncation]
  153 |     strncpy(numstr+20, record + 52, 10);
      |            ^
contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp: In function ‘read_xbgf_structure(void*, int*, molfile_atom_t*)’:
contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp:172:10: warning: ‘strncpy’ output may be truncated copying 5 bytes from a string of length 241 [-Wstringop-truncation]
  172 |   strncpy(name, record + 14, 5);
      |          ^
contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp:177:10: warning: ‘strncpy’ output may be truncated copying 4 bytes from a string of length 235 [-Wstringop-truncation]
  177 |   strncpy(resname, record + 20, 4);
      |          ^
contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp:182:10: warning: ‘strncpy’ output may be truncated copying 4 bytes from a string of length 154 [-Wstringop-truncation]
  182 |   strncpy(segname, record + 101, 4);
      |          ^
contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp:197:10: warning: ‘strncpy’ output may be truncated copying 5 bytes from a string of length 192 [-Wstringop-truncation]
  197 |   strncpy(type, record+63, 5);
      |          ^
In file included from contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c:49:
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h: In function ‘angular_momentum_expon’:
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:545:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  545 |   for (i=0; i<strlen(ang_mom_str); i++) {
      |              ^
contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c: In function ‘read_molden_rundata’:
contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c:596:25: warning: variable ‘hessian_data’ set but not used [-Wunused-but-set-variable]
  596 |   molfile_qm_hessian_t *hessian_data;
      |                         ^~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c: In function ‘count_orbitals’:
contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c:1165:3: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
 1165 |   fscanf(data->file, " Ene= %f\n", &orbenergy);
      |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c:1166:3: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
 1166 |   fscanf(data->file, " Spin= %s\n", spin);
      |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c:1167:3: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
 1167 |   fscanf(data->file, " Occup= %f\n", &occu);
      |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h: In function ‘eatline’:
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:840:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  840 |     fgets(readbuf, 1024, fd);
      |     ^~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c: In function ‘open_molden_read’:
contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c:224:11: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  224 |           fscanf(data->file, "%d", &natm);
      |           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h: At top level:
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:1097:13: warning: ‘whereami’ defined but not used [-Wunused-function]
 1097 | static void whereami(FILE *file) {
      |             ^~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:1077:13: warning: ‘thisline’ defined but not used [-Wunused-function]
 1077 | static void thisline(FILE *file) {
      |             ^~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:1006:12: warning: ‘have_keyline’ defined but not used [-Wunused-function]
 1006 | static int have_keyline(FILE *file, const char *keystring1,
      |            ^~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:711:12: warning: ‘symmetry_expand’ defined but not used [-Wunused-function]
  711 | static int symmetry_expand(qm_atom_t **atoms, int numunique, int natoms,
      |            ^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:585:13: warning: ‘print_matrix4’ defined but not used [-Wunused-function]
  585 | static void print_matrix4(const float mat[16]) {
      |             ^~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:507:13: warning: ‘del_wavefunction’ defined but not used [-Wunused-function]
  507 | static void del_wavefunction(qm_timestep_t *ts) {
      |             ^~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:490:13: warning: ‘replace_wavefunction’ defined but not used [-Wunused-function]
  490 | static void replace_wavefunction(qm_timestep_t *ts, int n) {
      |             ^~~~~~~~~~~~~~~~~~~~
In file included from contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c:48:
contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:133:12: warning: ‘get_pte_idx’ defined but not used [-Wunused-function]
  133 | static int get_pte_idx(const char *label)
      |            ^~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:109:14: warning: ‘get_pte_vdw_radius’ defined but not used [-Wunused-function]
  109 | static float get_pte_vdw_radius(const int idx)
      |              ^~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:102:14: warning: ‘get_pte_mass’ defined but not used [-Wunused-function]
  102 | static float get_pte_mass(const int idx)
      |              ^~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:95:20: warning: ‘get_pte_label’ defined but not used [-Wunused-function]
   95 | static const char *get_pte_label(const int idx)
      |                    ^~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp: In function ‘void eatline(FILE*)’:
contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:238:8: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  238 |   fgets(readbuf, 1024, fd);    // go on to next line
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp: In function ‘void* open_xsf_read(const char*, const char*, int*)’:
contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:408:14: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  408 |         fgets(readbuf, 256, xsf->fd);
      |         ~~~~~^~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:442:20: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  442 |               fgets(readbuf, 256, xsf->fd);
      |               ~~~~~^~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:444:20: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  444 |               fgets(readbuf, 256, xsf->fd);
      |               ~~~~~^~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:446:20: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  446 |               fgets(readbuf, 256, xsf->fd);
      |               ~~~~~^~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:448:20: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  448 |               fgets(readbuf, 256, xsf->fd);
      |               ~~~~~^~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:450:20: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  450 |               fgets(readbuf, 256, xsf->fd);
      |               ~~~~~^~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:473:22: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  473 |                 fgets(readbuf, 256, xsf->fd);
      |                 ~~~~~^~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:508:16: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  508 |           fgets(readbuf, 256, xsf->fd);
      |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~
In file included from contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:37:
contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h: At global scope:
contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: ‘int get_pte_idx_from_string(const char*)’ defined but not used [-Wunused-function]
  160 | static int get_pte_idx_from_string(const char *label) {
      |            ^~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp: In function ‘read_xsf_structure(void*, int*, molfile_atom_t*)’:
contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:597:20: warning: ‘strncpy’ output may be truncated copying 16 bytes from a string of length 1023 [-Wstringop-truncation]
  597 |             strncpy(atom->name, buffer, sizeof(atom->name));
      |                    ^
contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp: In function ‘open_xsf_read(char const*, char const*, int*)’:
contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:438:22: warning: ‘strncpy’ output may be truncated copying 255 bytes from a string of length 255 [-Wstringop-truncation]
  438 |               strncpy(set->dataname, readbuf, 255);
      |                      ^
contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c: In function ‘read_molden_structure’:
contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c:350:7: warning: ‘strncpy’ output may be truncated copying 16 bytes from a string of length 1023 [-Wstringop-truncation]
  350 |       strncpy(atom->type, atname, sizeof(atom->type));
      |       ^
contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c:351:7: warning: ‘strncpy’ output may be truncated copying 16 bytes from a string of length 1023 [-Wstringop-truncation]
  351 |       strncpy(atom->name, atname, sizeof(atom->name));
      |       ^
contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c:317:7: warning: ‘strncpy’ output may be truncated copying 16 bytes from a string of length 1023 [-Wstringop-truncation]
  317 |       strncpy(atom->name, atname,     sizeof(atom->name));
      |       ^
contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c:326:7: warning: ‘strncpy’ output may be truncated copying 11 bytes from a string of length 1023 [-Wstringop-truncation]
  326 |       strncpy(data->atoms[i].type, atname, sizeof(data->atoms[i].type));
      |       ^
contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp: In function ‘int read_edm_data(void*, int, float*, float*)’:
contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp:240:8: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  240 |   fgets(readbuf, 13, edm->fd);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp: In function ‘void eatline(FILE*)’:
contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp:44:8: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   44 |   fgets(readbuf, 1024, fd);    // go on to next line
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
In file included from contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c:57:
contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: ‘get_pte_idx_from_string’ defined but not used [-Wunused-function]
  160 | static int get_pte_idx_from_string(const char *label) {
      |            ^~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c: In function ‘read_xyz_structure’:
contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c:133:7: warning: ‘strncpy’ output may be truncated copying 16 bytes from a string of length 1023 [-Wstringop-truncation]
  133 |       strncpy(atom->name, buffer, sizeof(atom->name));
      |       ^
contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp: In function ‘int read_rawgraphics(void*, int*, const molfile_graphics_t**)’:
contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:91:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   91 |     fgets(line, 80, infile);
      |     ~~~~~^~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:116:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  116 |     fgets(line, 80, infile);
      |     ~~~~~^~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:132:9: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  132 |    fgets(line, 80, infile);
      |    ~~~~~^~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:149:11: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  149 |      fgets(line, 80, infile);
      |      ~~~~~^~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:155:20: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  155 |               fgets(line, 80, infile);
      |               ~~~~~^~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:161:11: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  161 |      fgets(line, 80, infile); //one more read to keep us in sync
      |      ~~~~~^~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:170:27: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  170 |                      fgets(line, 80, infile);
      |                      ~~~~~^~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:217:15: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  217 |          fgets(line, 80, infile);
      |          ~~~~~^~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:237:23: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  237 |                  fgets(line, 80, infile);
      |                  ~~~~~^~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:256:15: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  256 |          fgets(line, 80, infile);
      |          ~~~~~^~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp: In function ‘void* open_fs4_read(const char*, const char*, int*)’:
contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp:79:8: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   79 |   fread(&dataBegin, sizeof(int), 1, fd);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp:48:
contrib/uiuc/plugins/molfile_plugin/src/fortread.h: At global scope:
contrib/uiuc/plugins/molfile_plugin/src/fortread.h:133:13: warning: ‘void strnwscpy(char*, const char*, int)’ defined but not used [-Wunused-function]
  133 | static void strnwscpy(char *target, const char *source, const int len) {
      |             ^~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/fortread.h:55:12: warning: ‘int fort_get_endian_reclen(int, int, int, int*, int*)’ defined but not used [-Wunused-function]
   55 | static int fort_get_endian_reclen(int reclen, int word0, int word1,
      |            ^~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/fortread.h:36:12: warning: ‘int fort_eat_recmark(FILE*, int)’ defined but not used [-Wunused-function]
   36 | static int fort_eat_recmark(FILE *ifp, int recmarklen) {
      |            ^~~~~~~~~~~~~~~~
In file included from contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp:47:
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124:13: warning: ‘void swap8_aligned(void*, long int)’ defined but not used [-Wunused-function]
  124 | static void swap8_aligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: ‘void swap2_aligned(void*, long int)’ defined but not used [-Wunused-function]
   96 | static void swap2_aligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: ‘void swap8_unaligned(void*, long int)’ defined but not used [-Wunused-function]
   65 | static void swap8_unaligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: ‘void swap4_unaligned(void*, long int)’ defined but not used [-Wunused-function]
   46 | static void swap4_unaligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: ‘void swap2_unaligned(void*, long int)’ defined but not used [-Wunused-function]
   32 | static void swap2_unaligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~~~
In file included from contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:160:
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h: In function ‘angular_momentum_expon’:
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:545:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  545 |   for (i=0; i<strlen(ang_mom_str); i++) {
      |              ^
contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c: In function ‘have_gamess’:
contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:1106:8: warning: variable ‘word’ set but not used [-Wunused-but-set-variable]
 1106 |   char word[3][BUFSIZ];
      |        ^~~~
contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c: In function ‘read_next_timestep’:
contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c:103:10: warning: variable ‘numatoms’ set but not used [-Wunused-but-set-variable]
  103 |   int i, numatoms;
      |          ^~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c: In function ‘write_timestep’:
contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c:206:55: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  206 |     if (fwrite(tmp, sizeof(double), 3*n, namdbin->fd) != 3*n) {
      |                                                       ^~
contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c: In function ‘open_namdbin_read’:
contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c:78:3: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   78 |   fread(&filen, sizeof(namdbin_int32), 1, fd);
      |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c: In function ‘get_basis_stats’:
contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:2264:8: warning: variable ‘word’ set but not used [-Wunused-but-set-variable]
 2264 |   char word[7][BUFSIZ];
      |        ^~~~
contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c: In function ‘get_wavefunction’:
contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:3573:8: warning: variable ‘word’ set but not used [-Wunused-but-set-variable]
 3573 |   char word[6][BUFSIZ];
      |        ^~~~
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h: In function ‘eatline’:
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:840:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  840 |     fgets(readbuf, 1024, fd);
      |     ^~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c: At top level:
contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:1002:13: warning: ‘print_input_data’ defined but not used [-Wunused-function]
 1002 | static void print_input_data(qmdata_t *data) {
      |             ^~~~~~~~~~~~~~~~
In file included from contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:162:
contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:133:12: warning: ‘get_pte_idx’ defined but not used [-Wunused-function]
  133 | static int get_pte_idx(const char *label)
      |            ^~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:109:14: warning: ‘get_pte_vdw_radius’ defined but not used [-Wunused-function]
  109 | static float get_pte_vdw_radius(const int idx)
      |              ^~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:102:14: warning: ‘get_pte_mass’ defined but not used [-Wunused-function]
  102 | static float get_pte_mass(const int idx)
      |              ^~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:95:20: warning: ‘get_pte_label’ defined but not used [-Wunused-function]
   95 | static const char *get_pte_label(const int idx)
      |                    ^~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:1097:13: warning: ‘whereami’ defined but not used [-Wunused-function]
 1097 | static void whereami(FILE *file) {
      |             ^~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:1077:13: warning: ‘thisline’ defined but not used [-Wunused-function]
 1077 | static void thisline(FILE *file) {
      |             ^~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:1028:12: warning: ‘fpexpftoc’ defined but not used [-Wunused-function]
 1028 | static int fpexpftoc(char *ftocstr) {
      |            ^~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:901:14: warning: ‘strtoupper’ defined but not used [-Wunused-function]
  901 | static char *strtoupper(char *s) {
      |              ^~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:895:12: warning: ‘iswhiteline’ defined but not used [-Wunused-function]
  895 | static int iswhiteline(char *s) {
      |            ^~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:585:13: warning: ‘print_matrix4’ defined but not used [-Wunused-function]
  585 | static void print_matrix4(const float mat[16]) {
      |             ^~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c: In function ‘read_mmtk_cdf_structure’:
contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c:730:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
  730 |       if (len > sizeof(name)) {
      |               ^
contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c: In function ‘read_mmtk_cdf_timestep’:
contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c:1060:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1060 |     for (i=0; i<(3 * mmtk->atom_numberdim); i++) {
      |                ^
contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c: In function ‘read_gamess_rundata’:
contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:615:3: warning: ‘strncpy’ output may be truncated copying 81 bytes from a string of length 8191 [-Wstringop-truncation]
  615 |   strncpy(sys_data->basis_string, data->basis_string,
      |   ^
contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:620:3: warning: ‘strncpy’ output may be truncated copying 4096 bytes from a string of length 8191 [-Wstringop-truncation]
  620 |   strncpy(sys_data->runtitle, data->runtitle, sizeof(sys_data->runtitle));
      |   ^
contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:621:3: warning: ‘strncpy’ output may be truncated copying 81 bytes from a string of length 8191 [-Wstringop-truncation]
  621 |   strncpy(sys_data->geometry, data->geometry, sizeof(sys_data->geometry));
      |   ^
contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:622:3: warning: ‘strncpy’ output may be truncated copying 81 bytes from a string of length 8191 [-Wstringop-truncation]
  622 |   strncpy(sys_data->version_string, data->version_string,
      |   ^
layer0/Field.cpp: In function ‘PyObject* FieldAsNumPyArray(CField*, short int)’:
layer0/Field.cpp:83:1: warning: label ‘ok_except1’ defined but not used [-Wunused-label]
   83 | ok_except1:
      | ^~~~~~~~~~
layer0/Field.cpp: In function ‘CField* FieldNewFromPyList(PyMOLGlobals*, PyObject*)’:
layer0/Field.cpp:179:24: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
  179 |   ok = ok && I->size() == size;
      |              ~~~~~~~~~~^~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c: In function ‘get_coordinates’:
contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:1618:5: warning: ‘strncpy’ output may be truncated copying 11 bytes from a string of length 8191 [-Wstringop-truncation]
 1618 |     strncpy(atm->type, atname, sizeof(atm->type));
      |     ^
In file included from /usr/include/c++/14/cassert:44,
                 from layer0/Field.h:24,
                 from layer0/Field.cpp:26:
layer0/Field.h: In instantiation of ‘T* CField::ptr(SizeTs ...) [with T = float; SizeTs = {int, int, int}]’:
layer0/Field.h:114:19:   required from ‘T& CField::get(SizeTs ...) [with T = float; SizeTs = {int, int, int}]’
  114 |     return *ptr<T>(pos...);
      |             ~~~~~~^~~~~~~~
layer0/Field.cpp:343:17:   required from here
  156 | #define Ffloat3(f, a, b, c) ((f)->get<float>(a, b, c))
      |                              ~~~~~~~~~~~~~~~^~~~~~~~~
layer0/Field.h:100:27: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare]
  100 |     assert(sizeof...(pos) <= n_dim());
      |            ~~~~~~~~~~~~~~~^~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c: In function ‘get_runtitle’:
contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:1459:3: warning: ‘strncpy’ specified bound 8192 equals destination size [-Wstringop-truncation]
 1459 |   strncpy(data->runtitle,trimright(buffer),sizeof(data->runtitle));
      |   ^
contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c: In function ‘get_contrl’:
contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:1981:3: warning: ‘strncpy’ specified bound 8192 equals destination size [-Wstringop-truncation]
 1981 |   strncpy(data->geometry, trimright(temp+7), sizeof(data->geometry));
      |   ^
contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c: In function ‘get_contrl_firefly’:
contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:1818:3: warning: ‘strncpy’ specified bound 8192 equals destination size [-Wstringop-truncation]
 1818 |   strncpy(data->geometry, trimright(temp+7), sizeof(data->geometry));
      |   ^
contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp: In function ‘int read_parm7_structure(void*, int*, molfile_atom_t*)’:
contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp:78:14: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   78 |         fgets(buf, 85, file);
      |         ~~~~~^~~~~~~~~~~~~~~
In file included from contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp:25:
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h: In function ‘int parse_parm7_atoms(const char*, int, molfile_atom_t*, FILE*)’:
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:204:12: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  204 |       fgets(buf, 85, file);
      |       ~~~~~^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h: In function ‘int parse_parm7_atype(const char*, int, molfile_atom_t*, FILE*)’:
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:257:12: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  257 |       fgets(buf, 85, file);
      |       ~~~~~^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h: In function ‘int parse_parm7_resnames(const char*, int, char*, FILE*)’:
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:275:12: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  275 |       fgets(buf, 85, file);
      |       ~~~~~^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h: In function ‘int parse_parm7_respointers(const char*, int, molfile_atom_t*, int, const char*, FILE*)’:
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:289:9: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  289 |   fscanf(file, " %d", &cur);
      |   ~~~~~~^~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h: In function ‘parmstruct* read_parm7_header(FILE*)’:
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:368:8: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  368 |   fgets(sdum, 512, file);
      |   ~~~~~^~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:371:9: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  371 |   fscanf(file, "%s\n", sdum); // "%FLAG"
      |   ~~~~~~^~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:378:9: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  378 |   fscanf(file, "%s\n", sdum); // "TITLE" or "CTITLE"
      |   ~~~~~~^~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:385:9: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  385 |   fscanf(file, "%s\n", sdum); // "FORMAT (20a4)"
      |   ~~~~~~^~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:399:8: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  399 |   fgets(prm->title, sizeof(prm->title), file);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:427:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  427 |     fgets(sdum, sizeof(sdum), file);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:439:9: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  439 |   fscanf(file,parm7,
      |   ~~~~~~^~~~~~~~~~~~
  440 |          &prm->Natom,  &prm->Ntypes, &prm->Nbonh, &prm->Nbona,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  441 |          &prm->Ntheth, &prm->Ntheta, &prm->Nphih, &prm->Nphia,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  442 |          &prm->Jparm,  &prm->Nparm);
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:443:9: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  443 |   fscanf(file, parm7,
      |   ~~~~~~^~~~~~~~~~~~~
  444 |          &prm->Nnb,   &prm->Nres,   &prm->Mbona,  &prm->Mtheta,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  445 |          &prm->Mphia, &prm->Numbnd, &prm->Numang, &prm->Mptra,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  446 |          &prm->Natyp, &prm->Nphb);
      |          ~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:447:9: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  447 |   fscanf(file, parm7,  &prm->Ifpert, &prm->Nbper,  &prm->Ngper,
      |   ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  448 |          &prm->Ndper, &prm->Mbper,  &prm->Mgper, &prm->Mdper,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  449 |          &prm->IfBox, &prm->Nmxrs,  &prm->IfCap);
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:451:9: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  451 |   fscanf(file,"%8d",&prm->Numextra); //BB
      |   ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h: In function ‘int read_parm7_flag(FILE*, const char*, const char*)’:
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:79:9: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   79 |   fscanf(file, "%s\n", buf);
      |   ~~~~~~^~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:87:9: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   87 |   fscanf(file, "%s\n", buf);
      |   ~~~~~~^~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:97:9: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   97 |   fscanf(file, "%s\n", buf);
      |   ~~~~~~^~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c: In function ‘get_basis_options’:
contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:1422:5: warning: ‘__strncat_chk’ output may be truncated copying 1 byte from a string of length 9 [-Wstringop-truncation]
 1422 |     strncat(data->basis_string, &data->gbasis[3], 1);
      |     ^
contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:1411:5: warning: ‘__strncat_chk’ output may be truncated copying 1 byte from a string of length 9 [-Wstringop-truncation]
 1411 |     strncat(data->basis_string, &data->gbasis[2], 1);
      |     ^
contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c: In function ‘get_proc_mem.isra.0’:
contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:1279:5: warning: ‘strncpy’ output may be truncated copying 256 bytes from a string of length 8191 [-Wstringop-truncation]
 1279 |     strncpy(data->memory,&word[2][0],sizeof(data->memory));
      |     ^
contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:1272:5: warning: ‘strncpy’ specified bound 256 equals destination size [-Wstringop-truncation]
 1272 |     strncpy(data->memory,trimright(temp),sizeof(data->memory));
      |     ^
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h: In function ‘read_parm7_structure(void*, int*, molfile_atom_t*)’:
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:277:12: warning: ‘__strncpy_chk’ output may be truncated copying 4 bytes from a string of length 84 [-Wstringop-truncation]
  277 |     strncpy(resnames, buf+4*j, 4);
      |            ^
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:259:12: warning: ‘strncpy’ output may be truncated copying 4 bytes from a string of length 84 [-Wstringop-truncation]
  259 |     strncpy(atom->type, buf+4*j, 4);
      |            ^
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:206:12: warning: ‘strncpy’ output may be truncated copying 4 bytes from a string of length 84 [-Wstringop-truncation]
  206 |     strncpy(atom->name, buf+4*j, 4);
      |            ^
In file included from layer0/CarveHelper.cpp:8:
layer0/CarveHelper.h: In constructor ‘CarveHelper::CarveHelper(PyMOLGlobals*, float, const float*, std::size_t)’:
layer0/CarveHelper.h:23:9: warning: ‘CarveHelper::m_cutoff’ will be initialized after [-Wreorder]
   23 |   float m_cutoff;
      |         ^~~~~~~~
layer0/CarveHelper.h:22:16: warning:   ‘const float* CarveHelper::m_vertices’ [-Wreorder]
   22 |   const float* m_vertices;
      |                ^~~~~~~~~~
layer0/CarveHelper.cpp:20:1: warning:   when initialized here [-Wreorder]
   20 | CarveHelper::CarveHelper(PyMOLGlobals* G, float cutoff, const float* vertices,
      | ^~~~~~~~~~~
In file included from contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp:24:
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h: In member function ‘int {anonymous}::ReadPARM::readparm(FILE*)’:
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:435:17: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  435 |           fscanf(file, " " DBLFMT, &prm->Charges[i]);
      |           ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:444:17: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  444 |           fscanf(file, " " DBLFMT, &prm->Masses[i]);
      |           ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:510:17: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  510 |           fscanf(file, " " DBLFMT, &prm->Rk[i]);
      |           ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:517:17: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  517 |           fscanf(file, " " DBLFMT, &prm->Req[i]);
      |           ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:524:17: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  524 |           fscanf(file, " " DBLFMT, &prm->Tk[i]);
      |           ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:531:17: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  531 |           fscanf(file, " " DBLFMT, &prm->Teq[i]);
      |           ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:538:17: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  538 |           fscanf(file, " " DBLFMT, &prm->Pk[i]);
      |           ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:545:17: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  545 |           fscanf(file, " " DBLFMT, &prm->Pn[i]);
      |           ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:552:17: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  552 |           fscanf(file, " " DBLFMT, &prm->Phase[i]);
      |           ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:559:17: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  559 |           fscanf(file, " " DBLFMT, &prm->Solty[i]);
      |           ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:567:17: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  567 |           fscanf(file, " " DBLFMT, &prm->Cn1[i]);
      |           ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:575:17: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  575 |           fscanf(file, " " DBLFMT, &prm->Cn2[i]);
      |           ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:756:17: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  756 |           fscanf(file, " " DBLFMT, &prm->HB12[i]);
      |           ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:763:17: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  763 |           fscanf(file, " " DBLFMT, &prm->HB6[i]);
      |           ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:771:17: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  771 |           fscanf(file, " " DBLFMT, &H[i]);
      |           ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:853:23: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  853 |                 fscanf(file, " " DBLFMT " " DBLFMT " " DBLFMT,
      |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  854 |                                 &prm->Box[0], &prm->Box[1], &prm->Box[2]);
      |                                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:867:23: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  867 |                 fscanf(file, " %d " DBLFMT " " DBLFMT " " DBLFMT " " DBLFMT,
      |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  868 |                                 &prm->Natcap, &prm->Cutcap,
      |                                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~
  869 |                                 &prm->Xcap, &prm->Ycap, &prm->Zcap);
      |                                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c: In function ‘get_input_structure’:
contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:1682:5: warning: ‘strncpy’ output may be truncated copying 11 bytes from a string of length 8191 [-Wstringop-truncation]
 1682 |     strncpy(atm->type, atname, sizeof(atm->type));
      |     ^
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h: In function ‘get_traj_frame.isra.0’:
contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:819:5: warning: ‘strncpy’ output may be truncated copying 10 bytes from a string of length 10 [-Wstringop-truncation]
  819 |     strncpy((*atoms)[i].type, (*atoms)[indexmap[i]].type, 10);
      |     ^
In file included from contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp:53:
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: ‘void swap2_aligned(void*, long int)’ defined but not used [-Wunused-function]
   96 | static void swap2_aligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: ‘void swap8_unaligned(void*, long int)’ defined but not used [-Wunused-function]
   65 | static void swap8_unaligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: ‘void swap4_unaligned(void*, long int)’ defined but not used [-Wunused-function]
   46 | static void swap4_unaligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: ‘void swap2_unaligned(void*, long int)’ defined but not used [-Wunused-function]
   32 | static void swap2_unaligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~~~
In file included from /usr/include/c++/14/cassert:44,
                 from layer0/Field.h:24,
                 from layer0/Isosurf.h:24,
                 from layer0/ContourSurf.cpp:11:
layer0/Field.h: In instantiation of ‘T* CField::ptr(SizeTs ...) [with T = float; SizeTs = {long unsigned int, long unsigned int, long unsigned int}]’:
layer0/Field.h:114:19:   required from ‘T& CField::get(SizeTs ...) [with T = float; SizeTs = {long unsigned int, long unsigned int, long unsigned int}]’
  114 |     return *ptr<T>(pos...);
      |             ~~~~~~^~~~~~~~
layer0/ContourSurf.cpp:409:37:   required from here
  409 |     return m_field->data->get<float>(
      |            ~~~~~~~~~~~~~~~~~~~~~~~~~^
  410 |         x + m_offset[0], y + m_offset[1], z + m_offset[2]);
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer0/Field.h:100:27: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare]
  100 |     assert(sizeof...(pos) <= n_dim());
      |            ~~~~~~~~~~~~~~~^~~~~~~~~~
layer0/Field.h: In instantiation of ‘T* CField::ptr(SizeTs ...) [with T = float; SizeTs = {long unsigned int, long unsigned int, long unsigned int, int}]’:
layer0/Field.h:114:19:   required from ‘T& CField::get(SizeTs ...) [with T = float; SizeTs = {long unsigned int, long unsigned int, long unsigned int, int}]’
  114 |     return *ptr<T>(pos...);
      |             ~~~~~~^~~~~~~~
layer0/ContourSurf.cpp:419:36:   required from here
  419 |         m_field->points->get<float>(x, y, z, 0),
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
layer0/Field.h:100:27: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare]
  100 |     assert(sizeof...(pos) <= n_dim());
      |            ~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c:32:
contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:133:12: warning: ‘get_pte_idx’ defined but not used [-Wunused-function]
  133 | static int get_pte_idx(const char *label)
      |            ^~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp: In function ‘void line3(FILE*, GRASSP*)’:
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:186:8: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  186 |   fread(line3, 1, 80, infile);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp: In function ‘int read_rawgraphics(void*, int*, const molfile_graphics_t**)’:
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  280 | #define TRASH fread(trash, 4, 1, infile)
      |               ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:284:3: note: in expansion of macro ‘TRASH’
  284 |   TRASH;
      |   ^~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:285:8: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  285 |   fread(line, 1, 80, infile);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  280 | #define TRASH fread(trash, 4, 1, infile)
      |               ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:291:3: note: in expansion of macro ‘TRASH’
  291 |   TRASH;
      |   ^~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  280 | #define TRASH fread(trash, 4, 1, infile)
      |               ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:305:3: note: in expansion of macro ‘TRASH’
  305 |   TRASH;
      |   ^~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:306:8: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  306 |   fread(line, 1, 80, infile);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  280 | #define TRASH fread(trash, 4, 1, infile)
      |               ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:307:3: note: in expansion of macro ‘TRASH’
  307 |   TRASH;
      |   ^~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  280 | #define TRASH fread(trash, 4, 1, infile)
      |               ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:311:3: note: in expansion of macro ‘TRASH’
  311 |   TRASH;
      |   ^~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  280 | #define TRASH fread(trash, 4, 1, infile)
      |               ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:313:3: note: in expansion of macro ‘TRASH’
  313 |   TRASH;
      |   ^~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  280 | #define TRASH fread(trash, 4, 1, infile)
      |               ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:318:3: note: in expansion of macro ‘TRASH’
  318 |   TRASH;
      |   ^~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:319:8: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  319 |   fread(line, 1, 80, infile);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  280 | #define TRASH fread(trash, 4, 1, infile)
      |               ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:320:3: note: in expansion of macro ‘TRASH’
  320 |   TRASH;
      |   ^~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  280 | #define TRASH fread(trash, 4, 1, infile)
      |               ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:328:3: note: in expansion of macro ‘TRASH’
  328 |   TRASH;
      |   ^~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:329:8: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  329 |   fread(line, 1, 80, infile);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  280 | #define TRASH fread(trash, 4, 1, infile)
      |               ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:330:3: note: in expansion of macro ‘TRASH’
  330 |   TRASH;
      |   ^~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  280 | #define TRASH fread(trash, 4, 1, infile)
      |               ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:354:3: note: in expansion of macro ‘TRASH’
  354 |   TRASH;
      |   ^~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:355:8: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  355 |   fread(vertex, 3 * sizeof(float), nvert, infile);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  280 | #define TRASH fread(trash, 4, 1, infile)
      |               ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:356:3: note: in expansion of macro ‘TRASH’
  356 |   TRASH;
      |   ^~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  280 | #define TRASH fread(trash, 4, 1, infile)
      |               ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:357:3: note: in expansion of macro ‘TRASH’
  357 |   TRASH;
      |   ^~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:358:8: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  358 |   fread(access, 3 * sizeof(float), nvert, infile);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  280 | #define TRASH fread(trash, 4, 1, infile)
      |               ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:359:3: note: in expansion of macro ‘TRASH’
  359 |   TRASH;
      |   ^~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  280 | #define TRASH fread(trash, 4, 1, infile)
      |               ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:360:3: note: in expansion of macro ‘TRASH’
  360 |   TRASH;
      |   ^~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:361:8: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  361 |   fread(normal, 3 * sizeof(float), nvert, infile);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  280 | #define TRASH fread(trash, 4, 1, infile)
      |               ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:362:3: note: in expansion of macro ‘TRASH’
  362 |   TRASH;
      |   ^~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  280 | #define TRASH fread(trash, 4, 1, infile)
      |               ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:371:5: note: in expansion of macro ‘TRASH’
  371 |     TRASH;
      |     ^~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:372:10: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  372 |     fread(triangle, 3 * sizeof(int), ntriangles, infile);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  280 | #define TRASH fread(trash, 4, 1, infile)
      |               ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:373:5: note: in expansion of macro ‘TRASH’
  373 |     TRASH;
      |     ^~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  280 | #define TRASH fread(trash, 4, 1, infile)
      |               ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:374:5: note: in expansion of macro ‘TRASH’
  374 |     TRASH;
      |     ^~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:375:10: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  375 |     fread(properties, 3 * sizeof(float), nvert, infile);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  280 | #define TRASH fread(trash, 4, 1, infile)
      |               ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:394:5: note: in expansion of macro ‘TRASH’
  394 |     TRASH;
      |     ^~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:395:10: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  395 |     fread(striangle, sizeof(short), 3 * ntriangles, infile);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  280 | #define TRASH fread(trash, 4, 1, infile)
      |               ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:396:5: note: in expansion of macro ‘TRASH’
  396 |     TRASH;
      |     ^~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  280 | #define TRASH fread(trash, 4, 1, infile)
      |               ~~~~~^~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:397:5: note: in expansion of macro ‘TRASH’
  397 |     TRASH;
      |     ^~~~~
contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:398:10: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  398 |     fread(properties, sizeof(float), 3 * nvert, infile);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:40:
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h: At global scope:
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124:13: warning: ‘void swap8_aligned(void*, long int)’ defined but not used [-Wunused-function]
  124 | static void swap8_aligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: ‘void swap8_unaligned(void*, long int)’ defined but not used [-Wunused-function]
   65 | static void swap8_unaligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: ‘void swap4_unaligned(void*, long int)’ defined but not used [-Wunused-function]
   46 | static void swap4_unaligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: ‘void swap2_unaligned(void*, long int)’ defined but not used [-Wunused-function]
   32 | static void swap2_unaligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~~~
In file included from contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c:31:
contrib/uiuc/plugins/molfile_plugin/src/readpdb.h: In function ‘read_next_timestep’:
contrib/uiuc/plugins/molfile_plugin/src/readpdb.h:119:3: warning: ‘strncpy’ output may be truncated copying 80 bytes from a string of length 82 [-Wstringop-truncation]
  119 |   strncpy(tmp, record, PDB_RECORD_LENGTH);
      |   ^
contrib/uiuc/plugins/molfile_plugin/src/readpdb.h:144:5: warning: ‘strncpy’ output may be truncated copying 8 bytes from a string of length 52 [-Wstringop-truncation]
  144 |     strncpy(numstr, record + 30, 8);
      |     ^
contrib/uiuc/plugins/molfile_plugin/src/readpdb.h:149:5: warning: ‘strncpy’ output may be truncated copying 8 bytes from a string of length 44 [-Wstringop-truncation]
  149 |     strncpy(numstr+10, record + 38, 8);
      |     ^
contrib/uiuc/plugins/molfile_plugin/src/readpdb.h:154:5: warning: ‘strncpy’ output may be truncated copying 8 bytes from a string of length 36 [-Wstringop-truncation]
  154 |     strncpy(numstr+20, record + 46, 8);
      |     ^
contrib/uiuc/plugins/molfile_plugin/src/readpdb.h:159:5: warning: ‘strncpy’ output may be truncated copying 6 bytes from a string of length 28 [-Wstringop-truncation]
  159 |     strncpy(numstr+30, record + 54, 6);
      |     ^
contrib/uiuc/plugins/molfile_plugin/src/readpdb.h:164:5: warning: ‘strncpy’ output may be truncated copying 6 bytes from a string of length 22 [-Wstringop-truncation]
  164 |     strncpy(numstr+40, record + 60, 6);
      |     ^
contrib/uiuc/plugins/molfile_plugin/src/readpdb.h: In function ‘open_pdb_read’:
contrib/uiuc/plugins/molfile_plugin/src/readpdb.h:190:5: warning: ‘strncpy’ output may be truncated copying 9 bytes from a string of length 32 [-Wstringop-truncation]
  190 |     strncpy(date, record + 50, 9);
      |     ^
contrib/uiuc/plugins/molfile_plugin/src/readpdb.h:200:5: warning: ‘strncpy’ output may be truncated copying 4 bytes from a string of length 20 [-Wstringop-truncation]
  200 |     strncpy(pdbcode, record + 62, 4);
      |     ^
contrib/uiuc/plugins/molfile_plugin/src/readpdb.h: In function ‘read_pdb_structure’:
contrib/uiuc/plugins/molfile_plugin/src/readpdb.h:299:3: warning: ‘strncpy’ output may be truncated copying 4 bytes from a string of length 70 [-Wstringop-truncation]
  299 |   strncpy(name, record + 12, 4);
      |   ^
contrib/uiuc/plugins/molfile_plugin/src/readpdb.h:304:3: warning: ‘strncpy’ output may be truncated copying 1 byte from a string of length 66 [-Wstringop-truncation]
  304 |   strncpy(altloc, record + 16, 1);
      |   ^
contrib/uiuc/plugins/molfile_plugin/src/readpdb.h:308:3: warning: ‘strncpy’ output may be truncated copying 4 bytes from a string of length 65 [-Wstringop-truncation]
  308 |   strncpy(resname, record + 17, 4);
      |   ^
contrib/uiuc/plugins/molfile_plugin/src/readpdb.h:317:3: warning: ‘strncpy’ output may be truncated copying 4 bytes from a string of length 60 [-Wstringop-truncation]
  317 |   strncpy(resid, record + 22, 4);
      |   ^
contrib/uiuc/plugins/molfile_plugin/src/readpdb.h:159:5: warning: ‘strncpy’ output may be truncated copying 6 bytes from a string of length 28 [-Wstringop-truncation]
  159 |     strncpy(numstr+30, record + 54, 6);
      |     ^
contrib/uiuc/plugins/molfile_plugin/src/readpdb.h:164:5: warning: ‘strncpy’ output may be truncated copying 6 bytes from a string of length 22 [-Wstringop-truncation]
  164 |     strncpy(numstr+40, record + 60, 6);
      |     ^
contrib/uiuc/plugins/molfile_plugin/src/readpdb.h:330:5: warning: ‘strncpy’ output may be truncated copying 4 bytes from a string of length 10 [-Wstringop-truncation]
  330 |     strncpy(segname, record + 72, 4);
      |     ^
contrib/uiuc/plugins/molfile_plugin/src/readpdb.h:339:5: warning: ‘strncpy’ output may be truncated copying 2 bytes from a string of length 6 [-Wstringop-truncation]
  339 |     strncpy(elementsymbol, record + 76, 2);
      |     ^
contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp: In function ‘int getUniqueResID(char*, int)’:
contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:443:7: warning: unused variable ‘i’ [-Wunused-variable]
  443 |   int i, uid;
      |       ^
contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp: In function ‘int parseStructureFaster(molfile_atom_t*, int*, pdbxParser*)’:
contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:484:47: warning: unused variable ‘j’ [-Wunused-variable]
  484 |   int i, count, atomdata, pos, idx, xyzcount, j;
      |                                               ^
contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:503:8: warning: unused variable ‘oldChain’ [-Wunused-variable]
  503 |   char oldChain[8];
      |        ^~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp: In function ‘bool readAngleBonds(molfile_atom_t*, pdbxParser*)’:
contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:803:7: warning: unused variable ‘bondTable’ [-Wunused-variable]
  803 |   int bondTable[32];
      |       ^~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:807:15: warning: unused variable ‘j’ [-Wunused-variable]
  807 |   int i, pos, j, k;
      |               ^
contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:811:8: warning: unused variable ‘modelNum’ [-Wunused-variable]
  811 |   char modelNum[8];
      |        ^~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:822:20: warning: unused variable ‘atom’ [-Wunused-variable]
  822 |   molfile_atom_t * atom;
      |                    ^~~~
contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:884:7: warning: unused variable ‘test’ [-Wunused-variable]
  884 |   int test = parser->nbonds + bnum;
      |       ^~~~
contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp: In function ‘bool readRMSDBonds(molfile_atom_t*, pdbxParser*)’:
contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:984:7: warning: unused variable ‘bondTable’ [-Wunused-variable]
  984 |   int bondTable[32];
      |       ^~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:988:15: warning: unused variable ‘j’ [-Wunused-variable]
  988 |   int i, pos, j, k;
      |               ^
contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:991:8: warning: unused variable ‘modelNum’ [-Wunused-variable]
  991 |   char modelNum[8];
      |        ^~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:1002:20: warning: unused variable ‘atom’ [-Wunused-variable]
 1002 |   molfile_atom_t * atom;
      |                    ^~~~
contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp: In function ‘void* open_file_write(const char*, const char*, int)’:
contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:1409:9: warning: unused variable ‘fd’ [-Wunused-variable]
 1409 |   FILE* fd;
      |         ^~
contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp: At global scope:
contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:313:14: warning: ‘float stringToFloat(char*)’ defined but not used [-Wunused-function]
  313 | static float stringToFloat(char * str) {
      |              ^~~~~~~~~~~~~
In file included from contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:25:
contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:133:12: warning: ‘int get_pte_idx(const char*)’ defined but not used [-Wunused-function]
  133 | static int get_pte_idx(const char *label)
      |            ^~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:95:20: warning: ‘const char* get_pte_label(int)’ defined but not used [-Wunused-function]
   95 | static const char *get_pte_label(const int idx)
      |                    ^~~~~~~~~~~~~
In file included from contrib/uiuc/plugins/molfile_plugin/src/grdplugin.cpp:51:
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124:13: warning: ‘void swap8_aligned(void*, long int)’ defined but not used [-Wunused-function]
  124 | static void swap8_aligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: ‘void swap2_aligned(void*, long int)’ defined but not used [-Wunused-function]
   96 | static void swap2_aligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: ‘void swap8_unaligned(void*, long int)’ defined but not used [-Wunused-function]
   65 | static void swap8_unaligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: ‘void swap4_unaligned(void*, long int)’ defined but not used [-Wunused-function]
   46 | static void swap4_unaligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: ‘void swap2_unaligned(void*, long int)’ defined but not used [-Wunused-function]
   32 | static void swap2_unaligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp: In function ‘void* open_grid_read(const char*, const char*, int*)’:
contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp:84:8: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   84 |   fread(&dataBegin, sizeof(int), 1, fd);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp:60:
contrib/uiuc/plugins/molfile_plugin/src/fortread.h: At global scope:
contrib/uiuc/plugins/molfile_plugin/src/fortread.h:133:13: warning: ‘void strnwscpy(char*, const char*, int)’ defined but not used [-Wunused-function]
  133 | static void strnwscpy(char *target, const char *source, const int len) {
      |             ^~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/fortread.h:55:12: warning: ‘int fort_get_endian_reclen(int, int, int, int*, int*)’ defined but not used [-Wunused-function]
   55 | static int fort_get_endian_reclen(int reclen, int word0, int word1,
      |            ^~~~~~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/fortread.h:36:12: warning: ‘int fort_eat_recmark(FILE*, int)’ defined but not used [-Wunused-function]
   36 | static int fort_eat_recmark(FILE *ifp, int recmarklen) {
      |            ^~~~~~~~~~~~~~~~
In file included from contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp:59:
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124:13: warning: ‘void swap8_aligned(void*, long int)’ defined but not used [-Wunused-function]
  124 | static void swap8_aligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: ‘void swap2_aligned(void*, long int)’ defined but not used [-Wunused-function]
   96 | static void swap2_aligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: ‘void swap8_unaligned(void*, long int)’ defined but not used [-Wunused-function]
   65 | static void swap8_unaligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: ‘void swap4_unaligned(void*, long int)’ defined but not used [-Wunused-function]
   46 | static void swap4_unaligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: ‘void swap2_unaligned(void*, long int)’ defined but not used [-Wunused-function]
   32 | static void swap2_unaligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~~~
In file included from contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp:30:
contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h: In function ‘int mdio_readline(md_file*, char*, int, int)’:
contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h:426:14: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  426 |         fgets(buf, n, mf->f);
      |         ~~~~~^~~~~~~~~~~~~~~
In file included from contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h:48:
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h: At global scope:
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: ‘void swap2_aligned(void*, long int)’ defined but not used [-Wunused-function]
   96 | static void swap2_aligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: ‘void swap8_unaligned(void*, long int)’ defined but not used [-Wunused-function]
   65 | static void swap8_unaligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: ‘void swap4_unaligned(void*, long int)’ defined but not used [-Wunused-function]
   46 | static void swap4_unaligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: ‘void swap2_unaligned(void*, long int)’ defined but not used [-Wunused-function]
   32 | static void swap2_unaligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h: In function ‘g96_header(md_file*, char*, int, float*) [clone .constprop.0]’:
contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h:650:39: warning: ‘strncpy’ output may be truncated copying 80 bytes from a string of length 500 [-Wstringop-truncation]
  650 |         if (title && titlelen) strncpy(title, buf, titlelen);
      |                                       ^
contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h: In function ‘gro_header(md_file*, char*, int, float*, int*, int)’:
contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h:1018:33: warning: ‘strncpy’ output may be truncated copying 80 bytes from a string of length 500 [-Wstringop-truncation]
 1018 |   if (title && titlelen) strncpy(title, buf, titlelen);
      |                                 ^
contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp: In function ‘open_gro_read(char const*, char const*, int*)’:
contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp:103:12: warning: ‘strncpy’ output may be truncated copying 80 bytes from a string of length 80 [-Wstringop-truncation]
  103 |     strncpy(gmx->meta->title, mdh.title, 80);
      |            ^
In file included from contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c:79:
contrib/uiuc/plugins/molfile_plugin/src/fastio.h: In function ‘fio_readv’:
contrib/uiuc/plugins/molfile_plugin/src/fastio.h:519:14: warning: comparison of integer expressions of different signedness: ‘fio_size_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  519 |       if (rc != iov[i].iov_len)
      |              ^~
In file included from contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c:89:
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h: At top level:
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: ‘swap8_unaligned’ defined but not used [-Wunused-function]
   65 | static void swap8_unaligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: ‘swap4_unaligned’ defined but not used [-Wunused-function]
   46 | static void swap4_unaligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: ‘swap2_unaligned’ defined but not used [-Wunused-function]
   32 | static void swap2_unaligned(void *v, long ndata) {
      |             ^~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/fastio.h:459:19: warning: ‘fio_readv’ defined but not used [-Wunused-function]
  459 | static fio_size_t fio_readv(fio_fd fd, const fio_iovec * iov, int iovcnt) {
      |                   ^~~~~~~~~
In file included from /usr/include/c++/14/cassert:44,
                 from layer0/Field.h:24,
                 from layer0/Isosurf.h:24,
                 from layer0/Isosurf.cpp:25:
layer0/Field.h: In instantiation of ‘T* CField::ptr(SizeTs ...) [with T = float; SizeTs = {int, int, int, int}]’:
layer0/Isosurf.cpp:552:24:   required from here
  158 | #define Ffloat4p(f, a, b, c, d) ((f)->ptr<float>(a, b, c, d))
      |                                  ~~~~~~~~~~~~~~~^~~~~~~~~~~~
layer0/Field.h:100:27: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare]
  100 |     assert(sizeof...(pos) <= n_dim());
      |            ~~~~~~~~~~~~~~~^~~~~~~~~~
layer0/Field.h: In instantiation of ‘T* CField::ptr(SizeTs ...) [with T = float; SizeTs = {int, int, int}]’:
layer0/Isosurf.cpp:1459:32:   required from here
   39 | #define O3Ptr(field,P1,P2,P3,offs) ((field)->ptr<float>((P1)+offs[0],(P2)+offs[1],(P3)+offs[2]))
      |                                     ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer0/Field.h:100:27: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare]
  100 |     assert(sizeof...(pos) <= n_dim());
      |            ~~~~~~~~~~~~~~~^~~~~~~~~~
layer0/Field.h: In instantiation of ‘T* CField::ptr(SizeTs ...) [with T = PointType; SizeTs = {int, int, int, int}]’:
layer0/Field.h:134:26:   required from ‘T* CFieldTyped<T>::ptr(SizeTs ...) [with SizeTs = {int, int, int, int}; T = PointType]’
  134 |     return CField::ptr<T>(pos...);
      |            ~~~~~~~~~~~~~~^~~~~~~~
layer0/Isosurf.cpp:1617:19:   required from here
   53 | #define EdgePtPtr(field,P2,P3,P4,P5) ((field)->ptr(P2,P3,P4,P5))
      |                                       ~~~~~~~~~~~~^~~~~~~~~~~~~
layer0/Field.h:100:27: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare]
  100 |     assert(sizeof...(pos) <= n_dim());
      |            ~~~~~~~~~~~~~~~^~~~~~~~~~
layer0/Field.h: In instantiation of ‘T* CField::ptr(SizeTs ...) [with T = int; SizeTs = {int, int, int}]’:
layer0/Field.h:114:19:   required from ‘T& CField::get(SizeTs ...) [with T = int; SizeTs = {int, int, int}]’
  114 |     return *ptr<T>(pos...);
      |             ~~~~~~^~~~~~~~
layer0/Field.h:144:26:   required from ‘T& CFieldTyped<T>::get(SizeTs ...) [with SizeTs = {int, int, int}; T = int]’
  144 |     return CField::get<T>(pos...);
      |            ~~~~~~~~~~~~~~^~~~~~~~
layer0/Isosurf.cpp:1456:15:   required from here
   43 | #define I3(field,P1,P2,P3) ((field)->get<int>(P1,P2,P3))
      |                             ~~~~~~~~~~~~~~~~~^~~~~~~~~~
layer0/Field.h:100:27: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare]
  100 |     assert(sizeof...(pos) <= n_dim());
      |            ~~~~~~~~~~~~~~~^~~~~~~~~~
layer0/Field.h: In instantiation of ‘T* CField::ptr(SizeTs ...) [with T = int; SizeTs = {int, int, int, int}]’:
layer0/Field.h:114:19:   required from ‘T& CField::get(SizeTs ...) [with T = int; SizeTs = {int, int, int, int}]’
  114 |     return *ptr<T>(pos...);
      |             ~~~~~~^~~~~~~~
layer0/Field.h:144:26:   required from ‘T& CFieldTyped<T>::get(SizeTs ...) [with SizeTs = {int, int, int, int}; T = int]’
  144 |     return CField::get<T>(pos...);
      |            ~~~~~~~~~~~~~~^~~~~~~~
layer0/Isosurf.cpp:1487:13:   required from here
   45 | #define I4(field,P1,P2,P3,P4) ((field)->get<int>(P1,P2,P3,P4))
      |                                ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
layer0/Field.h:100:27: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare]
  100 |     assert(sizeof...(pos) <= n_dim());
      |            ~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from layer1/ButMode.cpp:22:
layer1/ButMode.cpp: In function ‘void ButModeFree(PyMOLGlobals*)’:
layer0/MemoryDebug.h:86:32: warning: deleting object of polymorphic class type ‘CButMode’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
   86 | #define DeleteP(ptr) {if(ptr) {delete ptr;ptr=NULL;}}
layer1/ButMode.cpp:144:3: note: in expansion of macro ‘DeleteP’
  144 |   DeleteP(G->ButMode);
      |   ^~~~~~~
layer1/CGO.cpp: In function ‘void CheckAttributesForUsage(const CGO*, AttribDataDesc&, AttribDataDesc&, CGO*, bool&)’:
layer1/CGO.cpp:10842:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
10842 |     for (auto idx = 0; idx < attrIdx; ++idx){
      |                        ~~~~^~~~~~~~~
layer1/CGO.cpp: In function ‘void PopulateOpsIntoStructuresForConversion(std::map<int, int>&, std::map<int, std::map<int, AttribOp*> >&, AttribDataDesc&, AttribDataDesc&, int&, bool)’:
layer1/CGO.cpp:10920:37: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
10920 |           if (attrOp->incr_vertices != vertsperpickinfo){
      |               ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
layer1/CGO.cpp: In function ‘CGO* CGOConvertToShader(const CGO*, AttribDataDesc&, AttribDataDesc&, int, GenericBuffer<34962>::buffer_layout, bool, int*, int, int)’:
layer1/CGO.cpp:11222:36: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<AttribDesc>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
11222 |             for (auto idx = 0; idx < attrData.size(); ++idx){
      |                                ~~~~^~~~~~~~~~~~~~~~~
layer1/CGO.cpp:11234:36: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<AttribDesc>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
11234 |             for (auto idx = 0; idx < attrData.size(); ++idx){
      |                                ~~~~^~~~~~~~~~~~~~~~~
layer1/CGO.cpp:11243:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
11243 |           for (int nxt = 0; nxt < attribOp->incr_vertices; ++nxt){
      |                             ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
layer1/Ortho.cpp:783:6: warning: ‘void OrthoKeyCmmd(PyMOLGlobals*, unsigned char)’ defined but not used [-Wunused-function]
  783 | void OrthoKeyCmmd(PyMOLGlobals * G, unsigned char k)
      |      ^~~~~~~~~~~~
In file included from /usr/include/string.h:548,
                 from /usr/include/python3.13/Python.h:39,
                 from layer0/os_python.h:34,
                 from layer1/Ortho.cpp:24:
In function ‘strcat’,
    inlined from ‘OrthoSpecial(PyMOLGlobals*, int, int, int, int)’ at layer1/Ortho.cpp:332:13:
/usr/include/bits/string_fortified.h:140:33: warning: ‘__strcat_chk’ accessing 4611686018427387985 or more bytes at offsets [80, 261200] and [-4611686018427387904, 4611686018427387903] may overlap 1 byte at offset [80, 9223372036854775807] [-Wrestrict]
  140 |   return __builtin___strcat_chk (__dest, __src, __glibc_objsize (__dest));
      |          ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function ‘strcat’,
    inlined from ‘OrthoSpecial(PyMOLGlobals*, int, int, int, int)’ at layer1/Ortho.cpp:349:13:
/usr/include/bits/string_fortified.h:140:33: warning: ‘__strcat_chk’ accessing 4611686018427387985 or more bytes at offsets [80, 261200] and [-4611686018427387904, 4611686018427387903] may overlap 1 byte at offset [80, 9223372036854775807] [-Wrestrict]
  140 |   return __builtin___strcat_chk (__dest, __src, __glibc_objsize (__dest));
      |          ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer0/MemoryDebug.cpp: In function ‘void* VLADeleteRaw(void*, int, unsigned int)’:
layer0/MemoryDebug.cpp:223:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘ov_size’ {aka ‘long unsigned int’} [-Wsign-compare]
  223 |       if(index < -old_size)
      |          ~~~~~~^~~~~~~~~~~
layer0/MemoryDebug.cpp:235:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘ov_size’ {aka ‘long unsigned int’} [-Wsign-compare]
  235 |        (index < vla->size) && ((count + index) <= vla->size)) {
      |         ~~~~~~^~~~~~~~~~~
layer0/MemoryDebug.cpp: In function ‘void* VLAInsertRaw(void*, int, unsigned int)’:
layer0/MemoryDebug.cpp:256:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘ov_size’ {aka ‘long unsigned int’} [-Wsign-compare]
  256 |       if(index < -old_size)
      |          ~~~~~~^~~~~~~~~~~
layer0/MemoryDebug.cpp:263:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘ov_size’ {aka ‘long unsigned int’} [-Wsign-compare]
  263 |     if(index > old_size)
      |        ~~~~~~^~~~~~~~~~
layer0/MemoryDebug.cpp:266:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘ov_size’ {aka ‘long unsigned int’} [-Wsign-compare]
  266 |     if((index >= 0) && (count > 0) && (index <= old_size)) {
      |                                        ~~~~~~^~~~~~~~~~~
layer0/MemoryUsage.cpp: In function ‘size_t pymol::memory_usage()’:
layer0/MemoryUsage.cpp:38:21: warning: use of assignment suppression and length modifier together in gnu_scanf format [-Wformat=]
   38 |     std::fscanf(fp, "%*zu%zu", &vmRSS);
      |                     ^~~~~~~~~
layer0/MemoryUsage.cpp:38:16: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
   38 |     std::fscanf(fp, "%*zu%zu", &vmRSS);
      |     ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
layer0/MyPNG.cpp: In function ‘int MyPNGWrite(const char*, const pymol::Image&, float, int, int, float, float, png_outbuf_t*)’:
layer0/MyPNG.cpp:299:20: warning: comparison of integer expressions of different signedness: ‘png_uint_32’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
  299 |       for(k = 0; k < height; k++)
      |                  ~~^~~~~~~~
layer0/MyPNG.cpp:340:24: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
  340 |           for(b = 0; b < height; b++) {
      |                      ~~^~~~~~~~
layer0/MyPNG.cpp:341:26: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
  341 |             for(a = 0; a < width; a++) {
      |                        ~~^~~~~~~
layer1/P.cpp: In function ‘int WrapperObjectAssignSubScript(PyObject*, PyObject*, PyObject*)’:
layer1/P.cpp:825:26: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare]
  825 |       if (strlen(valstr) > ap->maxlen) {
      |           ~~~~~~~~~~~~~~~^~~~~~~~~~~~
layer1/P.cpp:849:18: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare]
  849 |       if (valint == -1 && PyErr_Occurred())
      |           ~~~~~~~^~~~~
In file included from /usr/include/c++/14/cassert:44,
                 from layer0/Field.h:24,
                 from layer0/Isosurf.h:24,
                 from layer0/Tetsurf.cpp:24:
layer0/Field.h: In instantiation of ‘T* CField::ptr(SizeTs ...) [with T = float; SizeTs = {int, int, int, int}]’:
layer0/Tetsurf.cpp:802:18:   required from here
   37 | #define O4Ptr(field,P1,P2,P3,P4,offs) ((field)->ptr<float>(P1+offs[0],P2+offs[1],P3+offs[2],P4))
      |                                        ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer0/Field.h:100:27: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare]
  100 |     assert(sizeof...(pos) <= n_dim());
      |            ~~~~~~~~~~~~~~~^~~~~~~~~~
layer0/Field.h: In instantiation of ‘T* CField::ptr(SizeTs ...) [with T = PointType; SizeTs = {int, int, int, int}]’:
layer0/Tetsurf.cpp:831:27:   required from here
   59 | #define EdgePtPtr(field,P2,P3,P4,P5) ((field)->ptr<PointType>(P2,P3,P4,P5))
      |                                       ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
layer0/Field.h:100:27: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare]
  100 |     assert(sizeof...(pos) <= n_dim());
      |            ~~~~~~~~~~~~~~~^~~~~~~~~~
layer1/P.cpp: In function ‘int PAutoBlock(PyMOLGlobals*)’:
layer1/P.cpp:2288:27: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘long unsigned int’ [-Wsign-compare]
 2288 |     if (SavedThread[a].id == id) {
      |         ~~~~~~~~~~~~~~~~~~^~~~~
layer0/Field.h: In instantiation of ‘T* CField::ptr(SizeTs ...) [with T = int; SizeTs = {int, int, int}]’:
layer0/Field.h:114:19:   required from ‘T& CField::get(SizeTs ...) [with T = int; SizeTs = {int, int, int}]’
  114 |     return *ptr<T>(pos...);
      |             ~~~~~~^~~~~~~~
layer0/Tetsurf.cpp:791:16:   required from here
   39 | #define I3(field,P1,P2,P3) ((field)->get<int>(P1,P2,P3))
      |                             ~~~~~~~~~~~~~~~~~^~~~~~~~~~
layer0/Field.h:100:27: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare]
  100 |     assert(sizeof...(pos) <= n_dim());
      |            ~~~~~~~~~~~~~~~^~~~~~~~~~
layer0/Field.h: In instantiation of ‘T* CField::ptr(SizeTs ...) [with T = float; SizeTs = {int, int, int}]’:
layer0/Field.h:114:19:   required from ‘T& CField::get(SizeTs ...) [with T = float; SizeTs = {int, int, int}]’
  114 |     return *ptr<T>(pos...);
      |             ~~~~~~^~~~~~~~
layer0/Tetsurf.cpp:822:18:   required from here
   35 | #define O3(field,P1,P2,P3,offs) ((field)->get<float>(P1+offs[0],P2+offs[1],P3+offs[2]))
      |                                  ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer0/Field.h:100:27: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare]
  100 |     assert(sizeof...(pos) <= n_dim());
      |            ~~~~~~~~~~~~~~~^~~~~~~~~~
layer1/P.cpp: In function ‘int PIsGlutThread()’:
layer1/P.cpp:2314:39: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare]
 2314 |   return (PyThread_get_thread_ident() == P_glut_thread_id);
      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
layer1/P.cpp: At global scope:
layer1/P.cpp:2422:13: warning: ‘void PLockAPIWhileBlocked(PyMOLGlobals*)’ defined but not used [-Wunused-function]
 2422 | static void PLockAPIWhileBlocked(PyMOLGlobals * G)
      |             ^~~~~~~~~~~~~~~~~~~~
layer1/P.cpp:2411:13: warning: ‘void PUnlockAPIWhileBlocked(PyMOLGlobals*)’ defined but not used [-Wunused-function]
 2411 | static void PUnlockAPIWhileBlocked(PyMOLGlobals * G)
      |             ^~~~~~~~~~~~~~~~~~~~~~
layer1/P.cpp: In function ‘PLabelAtomAlt(PyMOLGlobals*, AtomInfoType*, char const*, char const*, int)’:
layer1/P.cpp:322:12: warning: ‘strncpy’ specified bound 1024 equals destination size [-Wstringop-truncation]
  322 |     strncpy(label, origexpr, OrthoLineLength);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer1/PConv.cpp: In function ‘int PConvPyListToBitmask(PyObject*, int*, ov_size)’:
layer1/PConv.cpp:83:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘ov_size’ {aka ‘long unsigned int’} [-Wsign-compare]
   83 |   for(int i = 0; i < ll; i++)
      |                  ~~^~~~
layer1/PConv.cpp: In function ‘PyObject* PConvLabPosVecToPyList(const std::vector<LabPosType>&)’:
layer1/PConv.cpp:1194:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<LabPosType>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1194 |     for (int a = 0; a < vec.size(); a++) {
      |                     ~~^~~~~~~~~~~~
layer1/Seq.cpp: In function ‘int SeqFindRowCol(PyMOLGlobals*, int, int, int*, int*, int)’:
layer1/Seq.cpp:61:41: warning: comparison of integer expressions of different signedness: ‘int’ and ‘ov_size’ {aka ‘long unsigned int’} [-Wsign-compare]
   61 |         if((char_num >= 0) && (char_num < row->ext_len) && (row->char2col)) {
      |                                ~~~~~~~~~^~~~~~~~~~~~~~
layer1/Seq.cpp: In member function ‘virtual void CSeq::reshape(int, int)’:
layer1/Seq.cpp:114:28: warning: comparison of integer expressions of different signedness: ‘ov_size’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  114 |       if(I->Row[a].ext_len > I->Size)
layer1/Seq.cpp: In member function ‘virtual void CSeq::draw(CGO*)’:
layer1/Seq.cpp:392:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘ov_size’ {aka ‘long unsigned int’} [-Wsign-compare]
  392 |         if(max_len < row->ext_len)
      |            ~~~~~~~~^~~~~~~~~~~~~~
In file included from layer0/vla.h:7,
                 from layer1/Symmetry.h:26,
                 from layer1/PyMOLObject.h:27,
                 from layer1/Seq.h:21,
                 from layer1/Seq.cpp:22:
layer1/Seq.cpp: In function ‘void SeqFree(PyMOLGlobals*)’:
layer0/MemoryDebug.h:86:32: warning: deleting object of polymorphic class type ‘CSeq’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
   86 | #define DeleteP(ptr) {if(ptr) {delete ptr;ptr=NULL;}}
layer1/Seq.cpp:731:3: note: in expansion of macro ‘DeleteP’
  731 |   DeleteP(G->Seq);
      |   ^~~~~~~
layer1/Seq.cpp: At global scope:
layer1/Seq.cpp:717:13: warning: ‘void SeqPurgeRowVLA(PyMOLGlobals*)’ defined but not used [-Wunused-function]
  717 | static void SeqPurgeRowVLA(PyMOLGlobals * G)
      |             ^~~~~~~~~~~~~~
In file included from layer1/Pop.cpp:22:
layer1/Pop.cpp: In function ‘void PopFree(PyMOLGlobals*)’:
layer0/MemoryDebug.h:86:32: warning: deleting object of polymorphic class type ‘CPop’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
   86 | #define DeleteP(ptr) {if(ptr) {delete ptr;ptr=NULL;}}
layer1/Pop.cpp:54:3: note: in expansion of macro ‘DeleteP’
   54 |   DeleteP(G->Pop);
      |   ^~~~~~~
layer1/Setting.cpp: In function ‘void SettingGenerateSideEffects(PyMOLGlobals*, int, const char*, int, int)’:
layer1/Setting.cpp:2070:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
 2070 |     if (SettingGetGlobal_b(G, cSetting_precomputed_lighting))
      |     ^~
layer1/Setting.cpp:2072:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
 2072 |       SceneInvalidate(G);
      |       ^~~~~~~~~~~~~~~
layer1/Ray.cpp: In function ‘void RayRender(CRay*, unsigned int*, double, float, int, unsigned int*)’:
layer1/Ray.cpp:6065:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 6065 |       if(x_stop > width)
      |          ~~~~~~~^~~~~~~
layer1/Ray.cpp:6067:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 6067 |       if(y_stop > height)
      |          ~~~~~~~^~~~~~~~
layer1/Ray.cpp:6148:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 6148 |       for(y = 0; y < height; y++)
      |                  ~~^~~~~~~~
layer1/Ray.cpp:6149:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 6149 |         for(x = 0; x < width; x++) {
      |                    ~~^~~~~~~
layer1/Ray.cpp:6160:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 6160 |           if(x < (width - 1)) {
      |              ~~^~~~~~~~~~~~~
layer1/Ray.cpp:6171:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 6171 |           if(y < (height - 1)) {
      |              ~~^~~~~~~~~~~~~~
layer1/Ray.cpp:6232:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 6232 |             for(y = 0; y < height; y++)
      |                        ~~^~~~~~~~
layer1/Ray.cpp:6233:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 6233 |               for(x = 0; x < width; x++) {
      |                          ~~^~~~~~~
layer1/Ray.cpp:6243:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 6243 |                   if(x < (width - 1)) {
      |                      ~~^~~~~~~~~~~~~
layer1/Ray.cpp:6255:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 6255 |                   if(y < (height - 1)) {
      |                      ~~^~~~~~~~~~~~~~
layer1/Ray.cpp:6306:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 6306 |           for(y = 0; y < height; y++){
      |                      ~~^~~~~~~~
layer1/Ray.cpp:6326:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 6326 |             for(x = 0; x < width; x++) {
      |                        ~~^~~~~~~
layer1/Ray.cpp:6345:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 6345 |                   if(x < (width - 1)) {
      |                      ~~^~~~~~~~~~~~~
layer1/Ray.cpp:6359:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 6359 |                   if(y < (height - 1)) {
      |                      ~~^~~~~~~~~~~~~~
layer1/Ray.cpp:6373:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 6373 |                   if(x && (y < (height - 1))) {
      |                            ~~^~~~~~~~~~~~~~
layer1/Ray.cpp:6380:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 6380 |                   if(y && (x < (width - 1))) {
      |                            ~~^~~~~~~~~~~~~
layer1/Ray.cpp:6387:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 6387 |                   if((y < (height - 1)) && (x < (width - 1))) {
      |                       ~~^~~~~~~~~~~~~~
layer1/Ray.cpp:6387:47: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 6387 |                   if((y < (height - 1)) && (x < (width - 1))) {
      |                                             ~~^~~~~~~~~~~~~
layer1/Ray.cpp:6543:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 6543 |       for(y = 0; y < height; y++) {
      |                  ~~^~~~~~~~
layer1/Ray.cpp:6544:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 6544 |         for(x = 0; x < width; x++) {
      |                    ~~^~~~~~~
In file included from include/tnt/tnt.h:49,
                 from layer0/ccealignmodule.cpp:39:
include/tnt/tnt_array2d_utils.h: In function ‘std::istream& TNT::operator>>(std::istream&, Array2D<T>&)’:
include/tnt/tnt_array2d_utils.h:62:5: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
   62 |     for (int i=0; i<M; i++)
      |     ^~~
include/tnt/tnt_array2d_utils.h:68:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
   68 |         A = B;
      |         ^
In file included from include/tnt/tnt.h:50:
include/tnt/tnt_array3d_utils.h: In function ‘std::istream& TNT::operator>>(std::istream&, Array3D<T>&)’:
include/tnt/tnt_array3d_utils.h:47:5: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
   47 |     for (int i=0; i<M; i++)
      |     ^~~
include/tnt/tnt_array3d_utils.h:52:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
   52 |         A = B;
      |         ^
In file included from include/tnt/tnt.h:56:
include/tnt/tnt_fortran_array2d_utils.h: In function ‘std::istream& TNT::operator>>(std::istream&, Fortran_Array2D<T>&)’:
include/tnt/tnt_fortran_array2d_utils.h:61:5: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
   61 |     for (int i=1; i<=M; i++)
      |     ^~~
include/tnt/tnt_fortran_array2d_utils.h:67:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
   67 |         A = B;
      |         ^
In file included from include/tnt/tnt.h:57:
include/tnt/tnt_fortran_array3d_utils.h: In function ‘std::istream& TNT::operator>>(std::istream&, Fortran_Array3D<T>&)’:
include/tnt/tnt_fortran_array3d_utils.h:65:5: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
   65 |     for (int i=1; i<=M; i++)
      |     ^~~
include/tnt/tnt_fortran_array3d_utils.h:70:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
   70 |         A = B;
      |         ^
layer1/Ray.cpp: In function ‘RayTraceThread(_CRayThreadInfo*)’:
layer1/Ray.cpp:3606:39: warning: ‘hl’ may be used uninitialized [-Wmaybe-uninitialized]
 3606 |           compute_background_for_pixel(bkrd_uc, isOutsideInY,
      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
 3607 |               bg_image_mode, bg_image_tilesize, bg_rgb, bg_image_linear,
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 3608 |               (unsigned char*) T->bkrd_data, T->bgWidth, T->bgHeight,
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 3609 |               x, wr, hl, hpixelx, orig_opaque_back );
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer1/Ray.cpp:3269:9: note: ‘hl’ was declared here
 3269 |   float hl;
      |         ^~
In file included from include/tnt/tnt.h:45:
In member function ‘TNT::Array1D<double>::set_(double*, double*, double const&)’,
    inlined from ‘TNT::Array1D<double>::Array1D(int, double const&)’ at include/tnt/tnt_array1d.h:119:6,
    inlined from ‘findBest(cePoint*, cePoint*, afp**, int, int, int)’ at layer0/ccealignmodule.cpp:506:28:
include/tnt/tnt_array1d.h:283:20: warning: ‘memset’ specified bound between 18446744056529682432 and 18446744073709551608 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=]
  283 |                 *p = a;
      |                 ~~~^~~
layer1/Ray.cpp: In function ‘RayRenderVRML2(_CRay*, int, int, char**, float, float, float, float, float)’:
layer1/Ray.cpp:1535:20: warning: ‘%s’ directive writing up to 1023 bytes into a region of size between 0 and 914 [-Wformat-overflow=]
 1535 |                   "%s"
      |                    ^~
......
 1540 |                   vert2[2] - mid[2], axis[0], axis[1], axis[2], angle, geometry);
      |                                                                        ~~~~~~~~
layer1/Ray.cpp:1530:18: note: ‘sprintf’ output between 116 and 2993 bytes into a destination of size 1024
 1530 |           sprintf(buffer,
      |           ~~~~~~~^~~~~~~~
 1531 |                   "Transform {\n"
      |                   ~~~~~~~~~~~~~~~
 1532 |                   " translation %8.6f %8.6f %8.6f\n"
      |                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1533 |                   " rotation %8.6f %8.6f %8.6f %8.6f\n"
      |                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1534 |                   " children [\n"
      |                   ~~~~~~~~~~~~~~~
 1535 |                   "%s"
      |                   ~~~~
 1536 |                   " ]\n"
      |                   ~~~~~~
 1537 |                   "}\n",
      |                   ~~~~~~
 1538 |                   vert2[0] - mid[0],
      |                   ~~~~~~~~~~~~~~~~~~
 1539 |                   vert2[1] - mid[1],
      |                   ~~~~~~~~~~~~~~~~~~
 1540 |                   vert2[2] - mid[2], axis[0], axis[1], axis[2], angle, geometry);
      |                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer0/marching_cubes.cpp: In function ‘mc::Mesh mc::march(const Field&, float, bool)’:
layer0/marching_cubes.cpp:517:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
  517 |   for (int z = 0; z < zDim; ++z) {
      |                   ~~^~~~~~
layer0/marching_cubes.cpp:550:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
  550 |   for (int z = 0; z < zEnd; ++z) {
      |                   ~~^~~~~~
layer0/marching_cubes.cpp:603:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
  603 |           if (z == zEnd - 1) {
      |               ~~^~~~~~~~~~~
layer0/marching_cubes.cpp:608:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
  608 |         if (z == zEnd - 1) {
      |             ~~^~~~~~~~~~~
layer0/marching_cubes.cpp: In function ‘void mc::calculateNormals(Mesh&)’:
layer0/marching_cubes.cpp:681:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  681 |   for (int i = 0; i < vertexCount; ++i) {
      |                   ~~^~~~~~~~~~~~~
layer0/marching_cubes.cpp:686:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  686 |   for (int i = 0; i < triangleCount; ++i) {
      |                   ~~^~~~~~~~~~~~~~~
layer0/marching_cubes.cpp:720:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  720 |   for (int i = 0; i < vertexCount; ++i) {
      |                   ~~^~~~~~~~~~~~~
layer1/SymOp.cpp: In member function ‘pymol::SymOp::to_string[abi:cxx11]() const’:
layer1/SymOp.cpp:37:32: warning: ‘%d’ directive output may be truncated writing between 1 and 4 bytes into a region of size between 0 and 5 [-Wformat-truncation=]
   37 |   std::snprintf(code, 8, "%u_%d%d%d", index + 1, x + 5, y + 5, z + 5);
      |                                ^~
layer1/SymOp.cpp:37:26: note: directive argument in the range [-123, 132]
   37 |   std::snprintf(code, 8, "%u_%d%d%d", index + 1, x + 5, y + 5, z + 5);
      |                          ^~~~~~~~~~~
layer1/SymOp.cpp:37:26: note: directive argument in the range [-123, 132]
In file included from /usr/include/stdio.h:970,
                 from /usr/include/c++/14/cstdio:42,
                 from /usr/include/c++/14/ext/string_conversions.h:45,
                 from /usr/include/c++/14/bits/basic_string.h:4154,
                 from /usr/include/c++/14/string:54,
                 from layer1/SymOp.h:9,
                 from layer1/SymOp.cpp:7:
In function ‘snprintf’,
    inlined from ‘pymol::SymOp::to_string[abi:cxx11]() const’ at layer1/SymOp.cpp:37:16:
/usr/include/bits/stdio2.h:68:35: note: ‘__snprintf_chk’ output between 6 and 17 bytes into a destination of size 8
   68 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   69 |                                    __glibc_objsize (__s), __fmt,
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   70 |                                    __va_arg_pack ());
      |                                    ~~~~~~~~~~~~~~~~~
layer1/Color.cpp: In function ‘ObjectGadgetRamp* ColorGetRamp(PyMOLGlobals*, int)’:
layer1/Color.cpp:180:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ExtRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  180 |     if (index < I->Ext.size()) {
      |         ~~~~~~^~~~~~~~~~~~~~~
layer1/Color.cpp: In function ‘int ColorExtFromPyList(PyMOLGlobals*, PyObject*, int)’:
layer1/Color.cpp:501:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  501 |   for (int a = 0; a < n_ext; ++a) {
      |                   ~~^~~~~~~
In file included from /usr/include/c++/14/cassert:44,
                 from /usr/include/glm/detail/setup.hpp:3,
                 from /usr/include/glm/detail/qualifier.hpp:3,
                 from /usr/include/glm/detail/type_vec2.hpp:6,
                 from /usr/include/glm/ext/vector_bool2.hpp:5,
                 from /usr/include/glm/vec2.hpp:5,
                 from layer0/GenericBuffer.h:12,
                 from layer0/ShaderMgr.h:24,
                 from layer1/Scene.h:29,
                 from layer3/Executive.h:35,
                 from layer1/Color.cpp:31:
layer1/Color.cpp:515:18: warning: comparison of integer expressions of different signedness: ‘const int’ and ‘std::vector<ExtRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  515 |     assert(a_new <= I->Ext.size());
      |            ~~~~~~^~~~~~~~~~~~~~~~
layer1/Color.cpp:518:15: warning: comparison of integer expressions of different signedness: ‘const int’ and ‘std::vector<ExtRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  518 |     if (a_new == I->Ext.size()) {
      |         ~~~~~~^~~~~~~~~~~~~~~~
layer1/Color.cpp: In function ‘int ColorFromPyList(PyMOLGlobals*, PyObject*, int)’:
layer1/Color.cpp:569:44: warning: comparison of integer expressions of different signedness: ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  569 |     if (partial_restore && I->Color.size() > index) {
      |                            ~~~~~~~~~~~~~~~~^~~~~~~
layer1/Color.cpp:575:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  575 |     if (index >= I->Color.size()) {
      |         ~~~~~~^~~~~~~~~~~~~~~~~~
layer1/Color.cpp:576:30: warning: comparison of integer expressions of different signedness: ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  576 |       assert(I->Color.size() == index);
      |              ~~~~~~~~~~~~~~~~^~~~~~~~
layer1/Color.cpp: In function ‘int ColorGetIndex(PyMOLGlobals*, const char*)’:
layer1/Color.cpp:683:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  683 |       if((i < I->Color.size()) && (i >= 0))
      |           ~~^~~~~~~~~~~~~~~~~
layer1/Color.cpp: In function ‘const char* ColorGetName(PyMOLGlobals*, int)’:
layer1/Color.cpp:764:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  764 |   if((index >= 0) && (index < I->Color.size())) {
      |                       ~~~~~~^~~~~~~~~~~~~~~~~
layer1/Color.cpp:776:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ExtRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  776 |     if (a < I->Ext.size()) {
      |         ~~^~~~~~~~~~~~~~~
layer1/Color.cpp: In function ‘int ColorGetStatus(PyMOLGlobals*, int)’:
layer1/Color.cpp:792:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  792 |   if((index >= 0) && (index < I->Color.size())) {
      |                       ~~~~~~^~~~~~~~~~~~~~~~~
layer1/Color.cpp: In function ‘void ColorReset(PyMOLGlobals*)’:
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1026:3: note: in expansion of macro ‘reg_named_color’
 1026 |   reg_named_color("white", 1.F, 1.F, 1.F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1027:3: note: in expansion of macro ‘reg_named_color’
 1027 |   reg_named_color("black", 0.F, 0.F, 0.F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1028:3: note: in expansion of macro ‘reg_named_color’
 1028 |   reg_named_color("blue", 0.F, 0.F, 1.F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1029:3: note: in expansion of macro ‘reg_named_color’
 1029 |   reg_named_color("green", 0.F, 1.F, 0.F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1030:3: note: in expansion of macro ‘reg_named_color’
 1030 |   reg_named_color("red", 1.F, 0.F, 0.F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1031:3: note: in expansion of macro ‘reg_named_color’
 1031 |   reg_named_color("cyan", 0.F, 1.F, 1.F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1032:3: note: in expansion of macro ‘reg_named_color’
 1032 |   reg_named_color("yellow", 1.F, 1.F, 0.F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1033:3: note: in expansion of macro ‘reg_named_color’
 1033 |   reg_named_color("dash", 1.F, 1.F, 0.F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1034:3: note: in expansion of macro ‘reg_named_color’
 1034 |   reg_named_color("magenta", 1.F, 0.F, 1.F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1035:3: note: in expansion of macro ‘reg_named_color’
 1035 |   reg_named_color("salmon", 1.F, 0.6F, 0.6F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1036:3: note: in expansion of macro ‘reg_named_color’
 1036 |   reg_named_color("lime", 0.5F, 1.F, 0.5F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1037:3: note: in expansion of macro ‘reg_named_color’
 1037 |   reg_named_color("slate", 0.5F, 0.5F, 1.F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1038:3: note: in expansion of macro ‘reg_named_color’
 1038 |   reg_named_color("hotpink", 1.F, 0.F, 0.5F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1039:3: note: in expansion of macro ‘reg_named_color’
 1039 |   reg_named_color("orange", 1.F, 0.5F, 0.F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1040:3: note: in expansion of macro ‘reg_named_color’
 1040 |   reg_named_color("chartreuse", 0.5F, 1.F, 0.F); /* AKA puke green */
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1041:3: note: in expansion of macro ‘reg_named_color’
 1041 |   reg_named_color("limegreen", 0.F, 1.F, 0.5F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1042:3: note: in expansion of macro ‘reg_named_color’
 1042 |   reg_named_color("purpleblue", 0.5F, 0.F, 1.F); /* legacy name */
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1043:3: note: in expansion of macro ‘reg_named_color’
 1043 |   reg_named_color("marine", 0.F, 0.5F, 1.F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1044:3: note: in expansion of macro ‘reg_named_color’
 1044 |   reg_named_color("olive", 0.77F, 0.7F, 0.F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1045:3: note: in expansion of macro ‘reg_named_color’
 1045 |   reg_named_color("purple", 0.75F, 0.F, 0.75F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1046:3: note: in expansion of macro ‘reg_named_color’
 1046 |   reg_named_color("teal", 0.F, 0.75F, 0.75F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1047:3: note: in expansion of macro ‘reg_named_color’
 1047 |   reg_named_color("ruby", 0.6F, 0.2F, 0.2F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1048:3: note: in expansion of macro ‘reg_named_color’
 1048 |   reg_named_color("forest", 0.2F, 0.6F, 0.2F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1049:3: note: in expansion of macro ‘reg_named_color’
 1049 |   reg_named_color("deepblue", 0.25F, 0.25F, 0.65F); /* was "deep" */
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1050:3: note: in expansion of macro ‘reg_named_color’
 1050 |   reg_named_color("grey", 0.5F, 0.5F, 0.5F); /* english spelling */
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1051:3: note: in expansion of macro ‘reg_named_color’
 1051 |   reg_named_color("gray", 0.5F, 0.5F, 0.5F); /* american spelling */
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1052:3: note: in expansion of macro ‘reg_named_color’
 1052 |   reg_named_color("carbon", 0.2F, 1.F, 0.2F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1053:3: note: in expansion of macro ‘reg_named_color’
 1053 |   reg_named_color("nitrogen", 0.2F, 0.2F, 1.F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1054:3: note: in expansion of macro ‘reg_named_color’
 1054 |   reg_named_color("oxygen", 1.F, 0.3F, 0.3F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1055:3: note: in expansion of macro ‘reg_named_color’
 1055 |   reg_named_color("hydrogen", 0.9F, 0.9F, 0.9F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1056:3: note: in expansion of macro ‘reg_named_color’
 1056 |   reg_named_color("brightorange", 1.F, 0.7F, 0.2F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1057:3: note: in expansion of macro ‘reg_named_color’
 1057 |   reg_named_color("sulfur", 0.9F, 0.775F, 0.25F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1058:3: note: in expansion of macro ‘reg_named_color’
 1058 |   reg_named_color("tv_red", 1.F, 0.2F, 0.2F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1059:3: note: in expansion of macro ‘reg_named_color’
 1059 |   reg_named_color("tv_green", 0.2F, 1.F, 0.2F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1060:3: note: in expansion of macro ‘reg_named_color’
 1060 |   reg_named_color("tv_blue", 0.3F, 0.3F, 1.F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1061:3: note: in expansion of macro ‘reg_named_color’
 1061 |   reg_named_color("tv_yellow", 1.F, 1.F, 0.2F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1062:3: note: in expansion of macro ‘reg_named_color’
 1062 |   reg_named_color("yelloworange", 1.F, 0.87F, 0.37F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1063:3: note: in expansion of macro ‘reg_named_color’
 1063 |   reg_named_color("tv_orange", 1.F, 0.55F, 0.15F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1064:3: note: in expansion of macro ‘reg_named_color’
 1064 |   reg_named_color("br0", 0.1F, 0.1F, 1.F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1065:3: note: in expansion of macro ‘reg_named_color’
 1065 |   reg_named_color("br1", 0.2F, 0.1F, 0.9F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1066:3: note: in expansion of macro ‘reg_named_color’
 1066 |   reg_named_color("br2", 0.3F, 0.1F, 0.8F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1067:3: note: in expansion of macro ‘reg_named_color’
 1067 |   reg_named_color("br3", 0.4F, 0.1F, 0.7F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1068:3: note: in expansion of macro ‘reg_named_color’
 1068 |   reg_named_color("br4", 0.5F, 0.1F, 0.6F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1069:3: note: in expansion of macro ‘reg_named_color’
 1069 |   reg_named_color("br5", 0.6F, 0.1F, 0.5F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1070:3: note: in expansion of macro ‘reg_named_color’
 1070 |   reg_named_color("br6", 0.7F, 0.1F, 0.4F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1071:3: note: in expansion of macro ‘reg_named_color’
 1071 |   reg_named_color("br7", 0.8F, 0.1F, 0.3F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1072:3: note: in expansion of macro ‘reg_named_color’
 1072 |   reg_named_color("br8", 0.9F, 0.1F, 0.2F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1073:3: note: in expansion of macro ‘reg_named_color’
 1073 |   reg_named_color("br9", 1.F, 0.1F, 0.1F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1074:3: note: in expansion of macro ‘reg_named_color’
 1074 |   reg_named_color("pink", 1.F, 0.65F, 0.85F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1075:3: note: in expansion of macro ‘reg_named_color’
 1075 |   reg_named_color("firebrick", 0.698F, 0.13F, 0.13F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1076:3: note: in expansion of macro ‘reg_named_color’
 1076 |   reg_named_color("chocolate", 0.555F, 0.222F, 0.111F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1077:3: note: in expansion of macro ‘reg_named_color’
 1077 |   reg_named_color("brown", 0.65F, 0.32F, 0.17F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1078:3: note: in expansion of macro ‘reg_named_color’
 1078 |   reg_named_color("wheat", 0.99F, 0.82F, 0.65F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1079:3: note: in expansion of macro ‘reg_named_color’
 1079 |   reg_named_color("violet", 1.F, 0.5F, 1.F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1088:5: note: in expansion of macro ‘reg_named_color’
 1088 |     reg_named_color(name, a / 99.F, a / 99.F, a / 99.F);
      |     ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1091:3: note: in expansion of macro ‘reg_named_color’
 1091 |   reg_named_color("lightmagenta", 1.F, 0.2F, 0.8F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1105:5: note: in expansion of macro ‘reg_named_color’
 1105 |     reg_named_color(name,
      |     ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1121:5: note: in expansion of macro ‘reg_named_color’
 1121 |     reg_named_color(name,
      |     ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1137:5: note: in expansion of macro ‘reg_named_color’
 1137 |     reg_named_color(name,
      |     ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1155:5: note: in expansion of macro ‘reg_named_color’
 1155 |     reg_named_color(name,
      |     ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1161:3: note: in expansion of macro ‘reg_named_color’
 1161 |   reg_named_color("density", 0.1F, 0.1F, 0.6F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1168:5: note: in expansion of macro ‘reg_named_color’
 1168 |     reg_named_color(name, a / 99.F, a / 99.F, a / 99.F);
      |     ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1183:5: note: in expansion of macro ‘reg_named_color’
 1183 |     reg_named_color(name,
      |     ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1189:3: note: in expansion of macro ‘reg_named_color’
 1189 |   reg_named_color("paleyellow", 1.F, 1.F, 0.5F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1190:3: note: in expansion of macro ‘reg_named_color’
 1190 |   reg_named_color("aquamarine", 0.5F, 1.F, 1.F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1191:3: note: in expansion of macro ‘reg_named_color’
 1191 |   reg_named_color("deepsalmon", 1.F, 0.5F, 0.5F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1192:3: note: in expansion of macro ‘reg_named_color’
 1192 |   reg_named_color("palegreen", 0.65F, 0.9F, 0.65F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1193:3: note: in expansion of macro ‘reg_named_color’
 1193 |   reg_named_color("deepolive", 0.6F, 0.6F, 0.1F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1194:3: note: in expansion of macro ‘reg_named_color’
 1194 |   reg_named_color("deeppurple", 0.6F, 0.1F, 0.6F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1195:3: note: in expansion of macro ‘reg_named_color’
 1195 |   reg_named_color("deepteal", 0.1F, 0.6F, 0.6F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1196:3: note: in expansion of macro ‘reg_named_color’
 1196 |   reg_named_color("lightblue", 0.75F, 0.75F, 1.F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1197:3: note: in expansion of macro ‘reg_named_color’
 1197 |   reg_named_color("lightorange", 1.F, 0.8F, 0.5F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1198:3: note: in expansion of macro ‘reg_named_color’
 1198 |   reg_named_color("palecyan", 0.8F, 1.F, 1.F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1199:3: note: in expansion of macro ‘reg_named_color’
 1199 |   reg_named_color("lightteal", 0.4F, 0.7F, 0.7F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1200:3: note: in expansion of macro ‘reg_named_color’
 1200 |   reg_named_color("splitpea", 0.52F, 0.75F, 0.F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1201:3: note: in expansion of macro ‘reg_named_color’
 1201 |   reg_named_color("raspberry", 0.7F, 0.3F, 0.4F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1202:3: note: in expansion of macro ‘reg_named_color’
 1202 |   reg_named_color("sand", 0.72F, 0.55F, 0.3F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1203:3: note: in expansion of macro ‘reg_named_color’
 1203 |   reg_named_color("smudge", 0.55F, 0.7F, 0.4F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1204:3: note: in expansion of macro ‘reg_named_color’
 1204 |   reg_named_color("violetpurple", 0.55F, 0.25F, 0.6F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1205:3: note: in expansion of macro ‘reg_named_color’
 1205 |   reg_named_color("dirtyviolet", 0.7F, 0.5F, 0.5F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1208:3: note: in expansion of macro ‘reg_named_color’
 1208 |   reg_named_color("_deepsalmon", 1.F, 0.42F, 0.42F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1210:3: note: in expansion of macro ‘reg_named_color’
 1210 |   reg_named_color("lightpink", 1.F, 0.75F, 0.87F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1211:3: note: in expansion of macro ‘reg_named_color’
 1211 |   reg_named_color("greencyan", 0.25F, 1.F, 0.75F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1212:3: note: in expansion of macro ‘reg_named_color’
 1212 |   reg_named_color("limon", 0.75F, 1.F, 0.25F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1213:3: note: in expansion of macro ‘reg_named_color’
 1213 |   reg_named_color("skyblue", 0.2F, 0.5F, 0.8F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1214:3: note: in expansion of macro ‘reg_named_color’
 1214 |   reg_named_color("bluewhite", 0.85F, 0.85F, 1.F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1215:3: note: in expansion of macro ‘reg_named_color’
 1215 |   reg_named_color("warmpink", 0.85F, 0.2F, 0.5F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1216:3: note: in expansion of macro ‘reg_named_color’
 1216 |   reg_named_color("darksalmon", 0.73F, 0.55F, 0.52F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1217:3: note: in expansion of macro ‘reg_named_color’
 1217 |   reg_named_color("helium", 0.850980392F, 1.F, 1.F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1218:3: note: in expansion of macro ‘reg_named_color’
 1218 |   reg_named_color("lithium", 0.8F, 0.501960784F, 1.F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1219:3: note: in expansion of macro ‘reg_named_color’
 1219 |   reg_named_color("beryllium", 0.760784314F, 1.F, 0.F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1220:3: note: in expansion of macro ‘reg_named_color’
 1220 |   reg_named_color("boron", 1.F, 0.709803922F, 0.709803922F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1221:3: note: in expansion of macro ‘reg_named_color’
 1221 |   reg_named_color("fluorine", 0.701960784F, 1.F, 1.F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1222:3: note: in expansion of macro ‘reg_named_color’
 1222 |   reg_named_color("neon", 0.701960784F, 0.890196078F, 0.960784314F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1223:3: note: in expansion of macro ‘reg_named_color’
 1223 |   reg_named_color("sodium", 0.670588235F, 0.360784314F, 0.949019608F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1224:3: note: in expansion of macro ‘reg_named_color’
 1224 |   reg_named_color("magnesium", 0.541176471F, 1.F, 0.F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1225:3: note: in expansion of macro ‘reg_named_color’
 1225 |   reg_named_color("aluminum", 0.749019608F, 0.650980392F, 0.650980392F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1226:3: note: in expansion of macro ‘reg_named_color’
 1226 |   reg_named_color("silicon", 0.941176471F, 0.784313725F, 0.62745098F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1227:3: note: in expansion of macro ‘reg_named_color’
 1227 |   reg_named_color("phosphorus", 1.F, 0.501960784F, 0.F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1228:3: note: in expansion of macro ‘reg_named_color’
 1228 |   reg_named_color("chlorine", 0.121568627F, 0.941176471F, 0.121568627F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1229:3: note: in expansion of macro ‘reg_named_color’
 1229 |   reg_named_color("argon", 0.501960784F, 0.819607843F, 0.890196078F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1230:3: note: in expansion of macro ‘reg_named_color’
 1230 |   reg_named_color("potassium", 0.560784314F, 0.250980392F, 0.831372549F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1231:3: note: in expansion of macro ‘reg_named_color’
 1231 |   reg_named_color("calcium", 0.239215686F, 1.F, 0.F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1232:3: note: in expansion of macro ‘reg_named_color’
 1232 |   reg_named_color("scandium", 0.901960784F, 0.901960784F, 0.901960784F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1233:3: note: in expansion of macro ‘reg_named_color’
 1233 |   reg_named_color("titanium", 0.749019608F, 0.760784314F, 0.780392157F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1234:3: note: in expansion of macro ‘reg_named_color’
 1234 |   reg_named_color("vanadium", 0.650980392F, 0.650980392F, 0.670588235F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1235:3: note: in expansion of macro ‘reg_named_color’
 1235 |   reg_named_color("chromium", 0.541176471F, 0.6F, 0.780392157F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1236:3: note: in expansion of macro ‘reg_named_color’
 1236 |   reg_named_color("manganese", 0.611764706F, 0.478431373F, 0.780392157F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1237:3: note: in expansion of macro ‘reg_named_color’
 1237 |   reg_named_color("iron", 0.878431373F, 0.4F, 0.2F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1238:3: note: in expansion of macro ‘reg_named_color’
 1238 |   reg_named_color("cobalt", 0.941176471F, 0.564705882F, 0.62745098F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1239:3: note: in expansion of macro ‘reg_named_color’
 1239 |   reg_named_color("nickel", 0.31372549F, 0.815686275F, 0.31372549F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1240:3: note: in expansion of macro ‘reg_named_color’
 1240 |   reg_named_color("copper", 0.784313725F, 0.501960784F, 0.2F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1241:3: note: in expansion of macro ‘reg_named_color’
 1241 |   reg_named_color("zinc", 0.490196078F, 0.501960784F, 0.690196078F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1242:3: note: in expansion of macro ‘reg_named_color’
 1242 |   reg_named_color("gallium", 0.760784314F, 0.560784314F, 0.560784314F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1243:3: note: in expansion of macro ‘reg_named_color’
 1243 |   reg_named_color("germanium", 0.4F, 0.560784314F, 0.560784314F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1244:3: note: in expansion of macro ‘reg_named_color’
 1244 |   reg_named_color("arsenic", 0.741176471F, 0.501960784F, 0.890196078F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1245:3: note: in expansion of macro ‘reg_named_color’
 1245 |   reg_named_color("selenium", 1.F, 0.631372549F, 0.F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1246:3: note: in expansion of macro ‘reg_named_color’
 1246 |   reg_named_color("bromine", 0.650980392F, 0.160784314F, 0.160784314F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1247:3: note: in expansion of macro ‘reg_named_color’
 1247 |   reg_named_color("krypton", 0.360784314F, 0.721568627F, 0.819607843F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1248:3: note: in expansion of macro ‘reg_named_color’
 1248 |   reg_named_color("rubidium", 0.439215686F, 0.180392157F, 0.690196078F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1249:3: note: in expansion of macro ‘reg_named_color’
 1249 |   reg_named_color("strontium", 0.F, 1.F, 0.F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1250:3: note: in expansion of macro ‘reg_named_color’
 1250 |   reg_named_color("yttrium", 0.580392157F, 1.F, 1.F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1251:3: note: in expansion of macro ‘reg_named_color’
 1251 |   reg_named_color("zirconium", 0.580392157F, 0.878431373F, 0.878431373F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1252:3: note: in expansion of macro ‘reg_named_color’
 1252 |   reg_named_color("niobium", 0.450980392F, 0.760784314F, 0.788235294F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1253:3: note: in expansion of macro ‘reg_named_color’
 1253 |   reg_named_color("molybdenum", 0.329411765F, 0.709803922F, 0.709803922F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1254:3: note: in expansion of macro ‘reg_named_color’
 1254 |   reg_named_color("technetium", 0.231372549F, 0.619607843F, 0.619607843F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1255:3: note: in expansion of macro ‘reg_named_color’
 1255 |   reg_named_color("ruthenium", 0.141176471F, 0.560784314F, 0.560784314F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1256:3: note: in expansion of macro ‘reg_named_color’
 1256 |   reg_named_color("rhodium", 0.039215686F, 0.490196078F, 0.549019608F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1257:3: note: in expansion of macro ‘reg_named_color’
 1257 |   reg_named_color("palladium", 0.F, 0.411764706F, 0.521568627F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1258:3: note: in expansion of macro ‘reg_named_color’
 1258 |   reg_named_color("silver", 0.752941176F, 0.752941176F, 0.752941176F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1259:3: note: in expansion of macro ‘reg_named_color’
 1259 |   reg_named_color("cadmium", 1.F, 0.850980392F, 0.560784314F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1260:3: note: in expansion of macro ‘reg_named_color’
 1260 |   reg_named_color("indium", 0.650980392F, 0.458823529F, 0.450980392F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1261:3: note: in expansion of macro ‘reg_named_color’
 1261 |   reg_named_color("tin", 0.4F, 0.501960784F, 0.501960784F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1262:3: note: in expansion of macro ‘reg_named_color’
 1262 |   reg_named_color("antimony", 0.619607843F, 0.388235294F, 0.709803922F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1263:3: note: in expansion of macro ‘reg_named_color’
 1263 |   reg_named_color("tellurium", 0.831372549F, 0.478431373F, 0.F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1264:3: note: in expansion of macro ‘reg_named_color’
 1264 |   reg_named_color("iodine", 0.580392157F, 0.F, 0.580392157F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1265:3: note: in expansion of macro ‘reg_named_color’
 1265 |   reg_named_color("xenon", 0.258823529F, 0.619607843F, 0.690196078F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1266:3: note: in expansion of macro ‘reg_named_color’
 1266 |   reg_named_color("cesium", 0.341176471F, 0.090196078F, 0.560784314F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1267:3: note: in expansion of macro ‘reg_named_color’
 1267 |   reg_named_color("barium", 0.F, 0.788235294F, 0.F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1268:3: note: in expansion of macro ‘reg_named_color’
 1268 |   reg_named_color("lanthanum", 0.439215686F, 0.831372549F, 1.F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1269:3: note: in expansion of macro ‘reg_named_color’
 1269 |   reg_named_color("cerium", 1.F, 1.F, 0.780392157F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1270:3: note: in expansion of macro ‘reg_named_color’
 1270 |   reg_named_color("praseodymium", 0.850980392F, 1.F, 0.780392157F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1271:3: note: in expansion of macro ‘reg_named_color’
 1271 |   reg_named_color("neodymium", 0.780392157F, 1.F, 0.780392157F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1272:3: note: in expansion of macro ‘reg_named_color’
 1272 |   reg_named_color("promethium", 0.639215686F, 1.F, 0.780392157F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1273:3: note: in expansion of macro ‘reg_named_color’
 1273 |   reg_named_color("samarium", 0.560784314F, 1.F, 0.780392157F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1274:3: note: in expansion of macro ‘reg_named_color’
 1274 |   reg_named_color("europium", 0.380392157F, 1.F, 0.780392157F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1275:3: note: in expansion of macro ‘reg_named_color’
 1275 |   reg_named_color("gadolinium", 0.270588235F, 1.F, 0.780392157F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1276:3: note: in expansion of macro ‘reg_named_color’
 1276 |   reg_named_color("terbium", 0.188235294F, 1.F, 0.780392157F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1277:3: note: in expansion of macro ‘reg_named_color’
 1277 |   reg_named_color("dysprosium", 0.121568627F, 1.F, 0.780392157F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1278:3: note: in expansion of macro ‘reg_named_color’
 1278 |   reg_named_color("holmium", 0.F, 1.F, 0.611764706F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1279:3: note: in expansion of macro ‘reg_named_color’
 1279 |   reg_named_color("erbium", 0.F, 0.901960784F, 0.458823529F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1280:3: note: in expansion of macro ‘reg_named_color’
 1280 |   reg_named_color("thulium", 0.F, 0.831372549F, 0.321568627F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1281:3: note: in expansion of macro ‘reg_named_color’
 1281 |   reg_named_color("ytterbium", 0.F, 0.749019608F, 0.219607843F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1282:3: note: in expansion of macro ‘reg_named_color’
 1282 |   reg_named_color("lutetium", 0.F, 0.670588235F, 0.141176471F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1283:3: note: in expansion of macro ‘reg_named_color’
 1283 |   reg_named_color("hafnium", 0.301960784F, 0.760784314F, 1.F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1284:3: note: in expansion of macro ‘reg_named_color’
 1284 |   reg_named_color("tantalum", 0.301960784F, 0.650980392F, 1.F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1285:3: note: in expansion of macro ‘reg_named_color’
 1285 |   reg_named_color("tungsten", 0.129411765F, 0.580392157F, 0.839215686F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1286:3: note: in expansion of macro ‘reg_named_color’
 1286 |   reg_named_color("rhenium", 0.149019608F, 0.490196078F, 0.670588235F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1287:3: note: in expansion of macro ‘reg_named_color’
 1287 |   reg_named_color("osmium", 0.149019608F, 0.4F, 0.588235294F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1288:3: note: in expansion of macro ‘reg_named_color’
 1288 |   reg_named_color("iridium", 0.090196078F, 0.329411765F, 0.529411765F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1289:3: note: in expansion of macro ‘reg_named_color’
 1289 |   reg_named_color("platinum", 0.815686275F, 0.815686275F, 0.878431373F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1290:3: note: in expansion of macro ‘reg_named_color’
 1290 |   reg_named_color("gold", 1.F, 0.819607843F, 0.137254902F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1291:3: note: in expansion of macro ‘reg_named_color’
 1291 |   reg_named_color("mercury", 0.721568627F, 0.721568627F, 0.815686275F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1292:3: note: in expansion of macro ‘reg_named_color’
 1292 |   reg_named_color("thallium", 0.650980392F, 0.329411765F, 0.301960784F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1293:3: note: in expansion of macro ‘reg_named_color’
 1293 |   reg_named_color("lead", 0.341176471F, 0.349019608F, 0.380392157F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1294:3: note: in expansion of macro ‘reg_named_color’
 1294 |   reg_named_color("bismuth", 0.619607843F, 0.309803922F, 0.709803922F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1295:3: note: in expansion of macro ‘reg_named_color’
 1295 |   reg_named_color("polonium", 0.670588235F, 0.360784314F, 0.F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1296:3: note: in expansion of macro ‘reg_named_color’
 1296 |   reg_named_color("astatine", 0.458823529F, 0.309803922F, 0.270588235F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1297:3: note: in expansion of macro ‘reg_named_color’
 1297 |   reg_named_color("radon", 0.258823529F, 0.509803922F, 0.588235294F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1298:3: note: in expansion of macro ‘reg_named_color’
 1298 |   reg_named_color("francium", 0.258823529F, 0.F, 0.4F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1299:3: note: in expansion of macro ‘reg_named_color’
 1299 |   reg_named_color("radium", 0.F, 0.490196078F, 0.F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1300:3: note: in expansion of macro ‘reg_named_color’
 1300 |   reg_named_color("actinium", 0.439215686F, 0.670588235F, 0.980392157F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1301:3: note: in expansion of macro ‘reg_named_color’
 1301 |   reg_named_color("thorium", 0.F, 0.729411765F, 1.F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1302:3: note: in expansion of macro ‘reg_named_color’
 1302 |   reg_named_color("protactinium", 0.F, 0.631372549F, 1.F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1303:3: note: in expansion of macro ‘reg_named_color’
 1303 |   reg_named_color("uranium", 0.F, 0.560784314F, 1.F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1304:3: note: in expansion of macro ‘reg_named_color’
 1304 |   reg_named_color("neptunium", 0.F, 0.501960784F, 1.F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1305:3: note: in expansion of macro ‘reg_named_color’
 1305 |   reg_named_color("plutonium", 0.F, 0.419607843F, 1.F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1306:3: note: in expansion of macro ‘reg_named_color’
 1306 |   reg_named_color("americium", 0.329411765F, 0.360784314F, 0.949019608F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1307:3: note: in expansion of macro ‘reg_named_color’
 1307 |   reg_named_color("curium", 0.470588235F, 0.360784314F, 0.890196078F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1308:3: note: in expansion of macro ‘reg_named_color’
 1308 |   reg_named_color("berkelium", 0.541176471F, 0.309803922F, 0.890196078F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1309:3: note: in expansion of macro ‘reg_named_color’
 1309 |   reg_named_color("californium", 0.631372549F, 0.211764706F, 0.831372549F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1310:3: note: in expansion of macro ‘reg_named_color’
 1310 |   reg_named_color("einsteinium", 0.701960784F, 0.121568627F, 0.831372549F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1311:3: note: in expansion of macro ‘reg_named_color’
 1311 |   reg_named_color("fermium", 0.701960784F, 0.121568627F, 0.729411765F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1312:3: note: in expansion of macro ‘reg_named_color’
 1312 |   reg_named_color("mendelevium", 0.701960784F, 0.050980392F, 0.650980392F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1313:3: note: in expansion of macro ‘reg_named_color’
 1313 |   reg_named_color("nobelium", 0.741176471F, 0.050980392F, 0.529411765F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1314:3: note: in expansion of macro ‘reg_named_color’
 1314 |   reg_named_color("lawrencium", 0.780392157F, 0.F, 0.4F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1315:3: note: in expansion of macro ‘reg_named_color’
 1315 |   reg_named_color("rutherfordium", 0.8F, 0.F, 0.349019608F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1316:3: note: in expansion of macro ‘reg_named_color’
 1316 |   reg_named_color("dubnium", 0.819607843F, 0.F, 0.309803922F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1317:3: note: in expansion of macro ‘reg_named_color’
 1317 |   reg_named_color("seaborgium", 0.850980392F, 0.F, 0.270588235F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1318:3: note: in expansion of macro ‘reg_named_color’
 1318 |   reg_named_color("bohrium", 0.878431373F, 0.F, 0.219607843F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1319:3: note: in expansion of macro ‘reg_named_color’
 1319 |   reg_named_color("hassium", 0.901960784F, 0.F, 0.180392157F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1320:3: note: in expansion of macro ‘reg_named_color’
 1320 |   reg_named_color("meitnerium", 0.921568627F, 0.F, 0.149019608F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1321:3: note: in expansion of macro ‘reg_named_color’
 1321 |   reg_named_color("deuterium", 0.9F, 0.9F, 0.9F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1322:3: note: in expansion of macro ‘reg_named_color’
 1322 |   reg_named_color("lonepair", 0.5F, 0.5F, 0.5F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map<std::__cxx11::basic_string<char>, int>::mapped_type’ {aka ‘int’} and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1023 |     assert(I->Idx[name] == Color.size() - 1);                                  \
layer1/Color.cpp:1323:3: note: in expansion of macro ‘reg_named_color’
 1323 |   reg_named_color("pseudoatom", 0.9F, 0.9F, 0.9F);
      |   ^~~~~~~~~~~~~~~
layer1/Color.cpp: In function ‘void ColorUpdateFromLut(PyMOLGlobals*, int)’:
layer1/Color.cpp:1695:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1695 |   for(i = 0; i < I->Color.size(); i++) {
      |              ~~^~~~~~~~~~~~~~~~~
layer1/Color.cpp:1699:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1699 |     if(index < I->Color.size()) {
      |        ~~~~~~^~~~~~~~~~~~~~~~~
layer1/Color.cpp: In function ‘const float* ColorGet(PyMOLGlobals*, int)’:
layer1/Color.cpp:1808:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1808 |   if((index >= 0) && (index < I->Color.size())) {
      |                       ~~~~~~^~~~~~~~~~~~~~~~~
layer1/Color.cpp: In function ‘const float* ColorGetRaw(PyMOLGlobals*, int)’:
layer1/Color.cpp:1835:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1835 |   if((index >= 0) && (index < I->Color.size())) {
      |                       ~~~~~~^~~~~~~~~~~~~~~~~
layer1/Color.cpp: In function ‘int ColorGetEncoded(PyMOLGlobals*, int, float*)’:
layer1/Color.cpp:1853:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1853 |   if((index >= 0) && (index < I->Color.size())) {
      |                       ~~~~~~^~~~~~~~~~~~~~~~~
layer1/Color.cpp: In instantiation of ‘int findByCaseInsensitiveName(PyMOLGlobals*, const Sequence&, const char*) [with Sequence = std::vector<ExtRec>]’:
layer1/Color.cpp:304:35:   required from here
  304 |   return findByCaseInsensitiveName(G, G->Color->Ext, name);
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
layer1/Color.cpp:245:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ExtRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  245 |   for (int a = 0; a < seq.size(); ++a) {
      |                   ~~^~~~~~~~~~~~
layer1/Color.cpp: In instantiation of ‘int findByCaseInsensitiveName(PyMOLGlobals*, const Sequence&, const char*) [with Sequence = std::vector<ColorRec>]’:
layer1/Color.cpp:626:38:   required from here
  626 |     color = findByCaseInsensitiveName(G, I->Color, name);
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
layer1/Color.cpp:245:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  245 |   for (int a = 0; a < seq.size(); ++a) {
      |                   ~~^~~~~~~~~~~~
layer1/Color.cpp: In instantiation of ‘int findByCaseInsensitivePrefix(PyMOLGlobals*, const Sequence&, const char*, int&) [with Sequence = std::vector<ColorRec>]’:
layer1/Color.cpp:741:42:   required from here
  741 |   int color = findByCaseInsensitivePrefix(G, I->Color, name, best);
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
layer1/Color.cpp:275:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ColorRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  275 |   for (int a = 0; a < seq.size(); ++a) {
      |                   ~~^~~~~~~~~~~~
layer1/Color.cpp: In instantiation of ‘int findByCaseInsensitivePrefix(PyMOLGlobals*, const Sequence&, const char*, int&) [with Sequence = std::vector<ExtRec>]’:
layer1/Color.cpp:743:54:   required from here
  743 |     int const ext_color = findByCaseInsensitivePrefix(G, I->Ext, name, best);
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
layer1/Color.cpp:275:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ExtRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  275 |   for (int a = 0; a < seq.size(); ++a) {
      |                   ~~^~~~~~~~~~~~
layer1/Scene.cpp: In function ‘int SceneViewEqual(float*, float*)’:
layer1/Scene.cpp:127:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const std::size_t’ {aka ‘const long unsigned int’} [-Wsign-compare]
  127 |   for(i = 0; i < cSceneViewSize; i++) {
      |              ~~^~~~~~~~~~~~~~~~
layer1/Scene.cpp: In function ‘void SceneFree(PyMOLGlobals*)’:
layer1/Scene.cpp:4071:3: warning: deleting object of polymorphic class type ‘CScene’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
 4071 |   delete G->Scene;
      |   ^~~~~~~~~~~~~~~
layer2/CifMoleculeReader.cpp: In member function ‘void seqvec_t::set(int, const char*)’:
layer2/CifMoleculeReader.cpp:108:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  108 |     if (i > size())
      |         ~~^~~~~~~~
layer2/CifMoleculeReader.cpp: In member function ‘const char* seqvec_t::get(int) const’:
layer2/CifMoleculeReader.cpp:114:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  114 |     if (i < 1 || i > size())
      |                  ~~^~~~~~~~
layer2/CifMoleculeReader.cpp: In function ‘CoordSet** read_pdbx_struct_assembly(PyMOLGlobals*, const pymol::cif_data*, const AtomInfoType*, const CoordSet*, const char*)’:
layer2/CifMoleculeReader.cpp:827:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  827 |       while (j < c_src_len * c_it->size()) {
      |              ~~^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from layer0/vla.h:7,
                 from layer1/Symmetry.h:26,
                 from layer1/PyMOLObject.h:27,
                 from layer1/Scene.h:22,
                 from layer1/Control.cpp:25:
layer1/Control.cpp: In function ‘void ControlFree(PyMOLGlobals*)’:
layer0/MemoryDebug.h:86:32: warning: deleting object of polymorphic class type ‘CControl’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
   86 | #define DeleteP(ptr) {if(ptr) {delete ptr;ptr=NULL;}}
layer1/Control.cpp:410:3: note: in expansion of macro ‘DeleteP’
  410 |   DeleteP(G->Control);
      |   ^~~~~~~
layer1/SceneMouse.cpp: In function ‘void SceneClickPickBond(PyMOLGlobals*, int, int, int, const NamedPicking&)’:
layer1/SceneMouse.cpp:513:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare]
  513 |     if (atIndex == LastPicked.src.index)
      |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
layer1/SceneMouse.cpp: In function ‘SceneClickTransformObject(PyMOLGlobals*, pymol::CObject*, NamedPicking const&, int, bool)’:
layer1/SceneMouse.cpp:455:32: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 237 [-Wformat-truncation=]
  455 |           " You clicked %s -> (%s)\n", buffer.c_str(), name ENDFB(G);
      |                                ^~                      ~~~~
In file included from /usr/include/stdio.h:970,
                 from /usr/include/c++/14/cstdio:42,
                 from /usr/include/c++/14/ext/string_conversions.h:45,
                 from /usr/include/c++/14/bits/basic_string.h:4154,
                 from /usr/include/c++/14/string:54,
                 from /usr/include/c++/14/bits/locale_classes.h:40,
                 from /usr/include/c++/14/bits/ios_base.h:41,
                 from /usr/include/c++/14/ios:44,
                 from /usr/include/c++/14/ostream:40,
                 from include/pymol/zstring_view.h:12,
                 from layer1/SceneMouse.h:4,
                 from layer1/SceneMouse.cpp:1:
In function ‘snprintf’,
    inlined from ‘SceneClickTransformObject(PyMOLGlobals*, pymol::CObject*, NamedPicking const&, int, bool)’ at layer1/SceneMouse.cpp:454:11:
/usr/include/bits/stdio2.h:68:35: note: ‘__snprintf_chk’ output 21 or more bytes (assuming 276) into a destination of size 255
   68 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   69 |                                    __glibc_objsize (__s), __fmt,
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   70 |                                    __va_arg_pack ());
      |                                    ~~~~~~~~~~~~~~~~~
In file included from layer2/CifMoleculeReader.cpp:31:
layer2/CifBondDict.h: In member function ‘res_bond_dict_t::add_alt_name(char const*, char const*)’:
layer2/CifBondDict.h:41:12: warning: ‘strncpy’ specified bound 4 equals destination size [-Wstringop-truncation]
   41 |     strncpy(s, name, sizeof(halfkey_t));
      |            ^
layer2/CifBondDict.h: In function ‘read_chem_comp_bond_dict(pymol::cif_data const*, bond_dict_t&)’:
layer2/CifBondDict.h:93:12: warning: ‘strncpy’ specified bound 8 equals destination size [-Wstringop-truncation]
   93 |     strncpy(s, s_, sizeof(s));
      |            ^
layer2/CifBondDict.h: In member function ‘bond_dict_t::get(PyMOLGlobals*, char const*, bool)’:
layer2/CifBondDict.h:93:12: warning: ‘strncpy’ specified bound 8 equals destination size [-Wstringop-truncation]
layer1/Extrude.cpp: In function ‘ExtrudeComputeTangents(CExtrude*)’:
layer1/Extrude.cpp:741:13: warning: ‘MEM <vector(2) float> [(float *)_62]’ may be used uninitialized [-Wmaybe-uninitialized]
  741 |   *(v1++) = *(v++);             /* first segment */
      |             ^~~~~~
layer1/Extrude.cpp:743:13: warning: ‘MEM[(float *)_62 + 8B]’ may be used uninitialized [-Wmaybe-uninitialized]
  743 |   *(v1++) = *(v++);
      |             ^~~~~~
layer1/Extrude.cpp: In function ‘ExtrudeCGOSurfaceTube(CExtrude const*, CGO*, cCylCap, float const*, bool, int)’:
layer1/Extrude.cpp:948:37: warning: ‘start’ may be used uninitialized [-Wmaybe-uninitialized]
  948 |             if(color_override && (b > start) && (b < stop))
      |                                  ~~~^~~~~~~~
layer1/Extrude.cpp:875:7: note: ‘start’ was declared here
  875 |   int start, stop;
      |       ^~~~~
layer1/Extrude.cpp:948:46: warning: ‘stop’ may be used uninitialized [-Wmaybe-uninitialized]
  948 |             if(color_override && (b > start) && (b < stop))
      |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
layer1/Extrude.cpp:875:14: note: ‘stop’ was declared here
  875 |   int start, stop;
      |              ^~~~
In function ‘SceneRenderPickingMultiPick(PyMOLGlobals*, SceneUnitContext*, Multipick*, unsigned int)’,
    inlined from ‘SceneRenderPicking(PyMOLGlobals*, int, int*, int, Picking*, int, int, Multipick*, SceneUnitContext*, unsigned int)’ at layer1/ScenePicking.cpp:314:32:
layer1/ScenePicking.cpp:249:7: warning: ‘previous.src.index’ may be used uninitialized [-Wmaybe-uninitialized]
  249 |       if (pik->src.index != previous.src.index ||
      |       ^~
layer1/ScenePicking.cpp: In function ‘SceneRenderPicking(PyMOLGlobals*, int, int*, int, Picking*, int, int, Multipick*, SceneUnitContext*, unsigned int)’:
layer1/ScenePicking.cpp:238:11: note: ‘previous.src.index’ was declared here
  238 |   Picking previous;
      |           ^~~~~~~~
In file included from /usr/include/c++/14/cassert:44,
                 from layer0/Field.h:24,
                 from layer3/Executive.h:27,
                 from layer2/CoordSet.cpp:54:
layer2/CoordSet.cpp: In member function ‘int CoordSet::atmToIdx(int) const’:
layer2/CoordSet.cpp:134:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  134 |   assert(atm < AtmToIdx.size());
      |          ~~~~^~~~~~~~~~~~~~~~~
layer2/CoordSet.cpp: In member function ‘void CoordSet::updateNonDiscreteAtmToIdx(unsigned int)’:
layer2/CoordSet.cpp:140:24: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
  140 |   assert(!Obj || natom == Obj->NAtom);
      |                  ~~~~~~^~~~~~~~~~~~~
layer2/CoordSet.cpp:145:16: warning: comparison of integer expressions of different signedness: ‘const int’ and ‘unsigned int’ [-Wsign-compare]
  145 |     assert(atm < natom);
      |            ~~~~^~~~~~~
layer2/CoordSet.cpp: In member function ‘int CoordSet::extendIndices(int)’:
layer2/CoordSet.cpp:1572:21: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare]
 1572 |     assert(NAtIndex <= nAtom);
      |            ~~~~~~~~~^~~~~~~~
layer2/CoordSet.cpp:1573:18: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare]
 1573 |     if (NAtIndex < nAtom) {
      |         ~~~~~~~~~^~~~~~~
layer2/CoordSet.cpp: In function ‘void CoordSetAtomToPDBStrVLA(PyMOLGlobals*, char**, int*, const AtomInfoType*, const float*, int, const PDBInfoRec*, const double*)’:
layer2/CoordSet.cpp:1014:14: warning: ‘char* strncpy(char*, const char*, size_t)’ output truncated before terminating nul copying 6 bytes from a string of the same length [-Wstringop-truncation]
 1014 |       strncpy(anisoline, "ANISOU", 6);
      |       ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
layer2/DistSet.cpp: In function ‘int DistSetGetLabelVertex(DistSet*, int, float*)’:
layer2/DistSet.cpp:43:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::array<float, 3> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   43 |   if (at >= 0 && at < I->LabCoord.size()) {
      |                  ~~~^~~~~~~~~~~~~~~~~~~~
layer2/DistSet.cpp: In member function ‘pymol::Result<std::array<float, 3> > DistSet::getLabelOffset(int) const’:
layer2/DistSet.cpp:59:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<LabPosType>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   59 |   if (atm < 0 || atm >= this->LabPos.size()) {
      |                  ~~~~^~~~~~~~~~~~~~~~~~~~~~
layer2/ObjectMap.cpp: In function ‘int ObjectMapValidXtal(ObjectMap*, int)’:
layer2/ObjectMap.cpp:133:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectMapState>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  133 |   if((state >= 0) && (state < I->State.size())) {
      |                       ~~~~~~^~~~~~~~~~~~~~~~~
layer2/ObjectMap.cpp: In function ‘pymol::Result<> ObjectMapTrim(ObjectMap*, int, float*, float*, int)’:
layer2/ObjectMap.cpp:914:36: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectMapState>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  914 |   } else if((state >= 0) && (state < I->State.size()) && (I->State[state].Active)) {
      |                              ~~~~~~^~~~~~~~~~~~~~~~~
layer2/ObjectMap.cpp: In function ‘pymol::Result<> ObjectMapDouble(ObjectMap*, int)’:
layer2/ObjectMap.cpp:931:36: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectMapState>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  931 |   } else if((state >= 0) && (state < I->State.size()) && (I->State[state].Active)) {
      |                              ~~~~~~^~~~~~~~~~~~~~~~~
layer2/ObjectMap.cpp: In function ‘pymol::Result<> ObjectMapHalve(ObjectMap*, int, int)’:
layer2/ObjectMap.cpp:946:36: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectMapState>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  946 |   } else if((state >= 0) && (state < I->State.size()) && (I->State[state].Active)) {
      |                              ~~~~~~^~~~~~~~~~~~~~~~~
layer2/ObjectMap.cpp: In function ‘void ObjectMapRegeneratePoints(ObjectMap*)’:
layer2/ObjectMap.cpp:1189:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectMapState>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1189 |   for (i=0; i<om->State.size();i++){
      |             ~^~~~~~~~~~~~~~~~~
layer2/ObjectMap.cpp: In function ‘PyObject* ObjectMapAllStatesAsPyList(ObjectMap*)’:
layer2/ObjectMap.cpp:1279:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectMapState>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1279 |   for(a = 0; a < I->State.size(); a++) {
      |              ~~^~~~~~~~~~~~~~~~~
layer2/ObjectMap.cpp: In function ‘int ObjectMapAllStatesFromPyList(ObjectMap*, PyObject*)’:
layer2/ObjectMap.cpp:1437:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectMapState>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1437 |     for(a = 0; a < I->State.size(); a++) {
      |                ~~^~~~~~~~~~~~~~~~~
layer2/ObjectMap.cpp: In function ‘int ObjectMapNewCopy(PyMOLGlobals*, const ObjectMap*, ObjectMap**, int, int)’:
layer2/ObjectMap.cpp:1509:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectMapState>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1509 |       for(state = 0; state < src->State.size(); state++) {
      |                      ~~~~~~^~~~~~~~~~~~~~~~~~~
layer2/ObjectMap.cpp:1518:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectMapState>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1518 |       if(source_state < src->State.size()) {
      |          ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
layer2/ObjectMap.cpp: In function ‘ObjectMapState* ObjectMapStatePrime(ObjectMap*, int)’:
layer2/ObjectMap.cpp:1535:22: warning: comparison of integer expressions of different signedness: ‘std::vector<ObjectMapState>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
 1535 |   if(I->State.size() <= state) {
      |      ~~~~~~~~~~~~~~~~^~~~~~~~
layer2/ObjectMap.cpp: In function ‘void ObjectMapUpdateExtents(ObjectMap*)’:
layer2/ObjectMap.cpp:1548:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectMapState>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1548 |   for(a = 0; a < I->State.size(); a++) {
      |              ~~^~~~~~~~~~~~~~~~~
layer2/ObjectMap.cpp: In member function ‘virtual void ObjectMap::invalidate(cRep_t, cRepInv_t, int)’:
layer2/ObjectMap.cpp:1674:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectMapState>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1674 |     for(a = 0; a < I->State.size(); a++) {
      |                ~~^~~~~~~~~~~~~~~~~
layer2/ObjectMap.cpp: In function ‘int ObjectMapCCP4StrToMap(ObjectMap*, char*, int, int, int, int)’:
layer2/ObjectMap.cpp:2297:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
 2297 |   if(bytes < 256 * sizeof(int)) {
      |      ~~~~~~^~~~~~~~~~~~~~~~~~~
layer2/ObjectMap.cpp:2307:22: warning: comparison of integer expressions of different signedness: ‘std::vector<ObjectMapState>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
 2307 |   if(I->State.size() <= state) {
      |      ~~~~~~~~~~~~~~~~^~~~~~~~
layer2/ObjectMap.cpp: In function ‘int ObjectMapPHIStrToMap(ObjectMap*, char*, int, int, int)’:
layer2/ObjectMap.cpp:2942:22: warning: comparison of integer expressions of different signedness: ‘std::vector<ObjectMapState>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
 2942 |   if(I->State.size() <= state) {
      |      ~~~~~~~~~~~~~~~~^~~~~~~~
layer2/ObjectMap.cpp: In function ‘int ObjectMapXPLORStrToMap(ObjectMap*, char*, int, int)’:
layer2/ObjectMap.cpp:3216:22: warning: comparison of integer expressions of different signedness: ‘std::vector<ObjectMapState>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
 3216 |   if(I->State.size() <= state) {
      |      ~~~~~~~~~~~~~~~~^~~~~~~~
layer2/ObjectMap.cpp: In function ‘int ObjectMapFLDStrToMap(ObjectMap*, char*, int, int, int)’:
layer2/ObjectMap.cpp:3437:22: warning: comparison of integer expressions of different signedness: ‘std::vector<ObjectMapState>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
 3437 |   if(I->State.size() <= state) {
      |      ~~~~~~~~~~~~~~~~^~~~~~~~
layer2/ObjectMap.cpp: In function ‘int ObjectMapBRIXStrToMap(ObjectMap*, char*, int, int, int)’:
layer2/ObjectMap.cpp:3766:22: warning: comparison of integer expressions of different signedness: ‘std::vector<ObjectMapState>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
 3766 |   if(I->State.size() <= state) {
      |      ~~~~~~~~~~~~~~~~^~~~~~~~
layer2/ObjectMap.cpp: In function ‘int ObjectMapGRDStrToMap(ObjectMap*, char*, int, int, int)’:
layer2/ObjectMap.cpp:4172:22: warning: comparison of integer expressions of different signedness: ‘std::vector<ObjectMapState>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
 4172 |   if(I->State.size() <= state) {
      |      ~~~~~~~~~~~~~~~~^~~~~~~~
layer2/ObjectMap.cpp: In function ‘ObjectMap* ObjectMapLoadCCP4(PyMOLGlobals*, ObjectMap*, const char*, int, int, int, int, int)’:
layer2/ObjectMap.cpp:4694:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectMapState>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 4694 |       if(state < I->State.size()) {
      |          ~~~~~~^~~~~~~~~~~~~~~~~
layer2/ObjectMap.cpp: In function ‘int ObjectMapACNTStrToMap(ObjectMap*, char*, int, int, int)’:
layer2/ObjectMap.cpp:5245:22: warning: comparison of integer expressions of different signedness: ‘std::vector<ObjectMapState>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
 5245 |   if(I->State.size() <= state) {
      |      ~~~~~~~~~~~~~~~~^~~~~~~~
layer2/ObjectMap.cpp: In function ‘ObjectMap* ObjectMapLoadXPLOR(PyMOLGlobals*, ObjectMap*, const char*, int, int, int)’:
layer2/ObjectMap.cpp:5557:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectMapState>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 5557 |         if(state < I->State.size()) {
      |            ~~~~~~^~~~~~~~~~~~~~~~~
layer2/ObjectMap.cpp: In function ‘ObjectMap* ObjectMapLoadChemPyBrick(PyMOLGlobals*, ObjectMap*, PyObject*, int, int, int)’:
layer2/ObjectMap.cpp:5711:24: warning: comparison of integer expressions of different signedness: ‘std::vector<ObjectMapState>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
 5711 |     if(I->State.size() <= state) {
      |        ~~~~~~~~~~~~~~~~^~~~~~~~
layer2/ObjectMap.cpp: In function ‘ObjectMap* ObjectMapLoadChemPyMap(PyMOLGlobals*, ObjectMap*, PyObject*, int, int, int)’:
layer2/ObjectMap.cpp:5809:24: warning: comparison of integer expressions of different signedness: ‘std::vector<ObjectMapState>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
 5809 |     if(I->State.size() <= state) {
      |        ~~~~~~~~~~~~~~~~^~~~~~~~
In file included from /usr/include/c++/14/cassert:44,
                 from layer0/Field.h:24,
                 from layer0/Isosurf.h:24,
                 from layer2/ObjectMap.h:25,
                 from layer2/ObjectMap.cpp:27:
layer0/Field.h: In instantiation of ‘T* CField::ptr(SizeTs ...) [with T = float; SizeTs = {int, int, int, int}]’:
layer2/ObjectMap.cpp:198:30:   required from here
  158 | #define Ffloat4p(f, a, b, c, d) ((f)->ptr<float>(a, b, c, d))
      |                                  ~~~~~~~~~~~~~~~^~~~~~~~~~~~
layer0/Field.h:100:27: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare]
  100 |     assert(sizeof...(pos) <= n_dim());
      |            ~~~~~~~~~~~~~~~^~~~~~~~~~
layer0/Field.h: In instantiation of ‘T* CField::ptr(SizeTs ...) [with T = float; SizeTs = {int, int, int}]’:
layer2/ObjectMap.cpp:1605:14:   required from here
  155 | #define Ffloat3p(f, a, b, c) ((f)->ptr<float>(a, b, c))
      |                               ~~~~~~~~~~~~~~~^~~~~~~~~
layer0/Field.h:100:27: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare]
  100 |     assert(sizeof...(pos) <= n_dim());
      |            ~~~~~~~~~~~~~~~^~~~~~~~~~
layer0/Field.h: In instantiation of ‘T* CField::ptr(SizeTs ...) [with T = int; SizeTs = {int, int, int}]’:
layer0/Field.h:114:19:   required from ‘T& CField::get(SizeTs ...) [with T = int; SizeTs = {int, int, int}]’
  114 |     return *ptr<T>(pos...);
      |             ~~~~~~^~~~~~~~
layer2/ObjectMap.cpp:5967:46:   required from here
 5967 |             int value = field->data->get<int>(xi, yi, zi);
      |                         ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
layer0/Field.h:100:27: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare]
  100 |     assert(sizeof...(pos) <= n_dim());
      |            ~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/ndarrayobject.h:21,
                 from /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/arrayobject.h:5,
                 from layer0/os_numpy.h:8,
                 from layer2/ObjectMap.cpp:22:
/usr/lib64/python3.13/site-packages/numpy/core/include/numpy/__multiarray_api.h: At global scope:
/usr/lib64/python3.13/site-packages/numpy/core/include/numpy/__multiarray_api.h:1483:1: warning: ‘int _import_array()’ defined but not used [-Wunused-function]
 1483 | _import_array(void)
      | ^~~~~~~~~~~~~
layer1/Wizard.cpp: In member function ‘virtual int CWizard::release(int, int, int, int)’:
layer1/Wizard.cpp:571:18: warning: unused variable ‘wiz’ [-Wunused-variable]
  571 |         if (auto wiz = WizardGet(G)) {
      |                  ^~~
layer1/Wizard.cpp: In member function ‘virtual void CWizard::draw(CGO*)’:
layer1/Wizard.cpp:727:5: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation]
  727 |     else
      |     ^~~~
layer1/Wizard.cpp:729:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’
  729 |       drawTopEdge();
      |       ^~~~~~~~~~~
In file included from layer1/Wizard.cpp:27:
layer1/Wizard.cpp: In function ‘void WizardFree(PyMOLGlobals*)’:
layer0/MemoryDebug.h:86:32: warning: deleting object of polymorphic class type ‘CWizard’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
   86 | #define DeleteP(ptr) {if(ptr) {delete ptr;ptr=NULL;}}
layer1/Wizard.cpp:845:3: note: in expansion of macro ‘DeleteP’
  845 |   DeleteP(G->Wizard);
      |   ^~~~~~~
layer2/HydrogenAdder.cpp: In function ‘int ObjectMoleculeAddSeleHydrogensRefactored(ObjectMolecule*, int, int)’:
layer2/HydrogenAdder.cpp:283:30: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘const int’ [-Wsign-compare]
  283 |   for (unsigned atm = 0; atm < n_atom_old; atm++) {
      |                          ~~~~^~~~~~~~~~~~
layer2/HydrogenAdder.cpp:301:30: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘const int’ [-Wsign-compare]
  301 |   for (unsigned atm = 0; atm < n_atom_old; ++atm) {
      |                          ~~~~^~~~~~~~~~~~
layer2/HydrogenAdder.cpp:349:32: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
  349 |     for (unsigned idx = 0; idx < cs->NIndex; ++idx) {
      |                            ~~~~^~~~~~~~~~~~
In file included from layer0/OOMac.h:22,
                 from layer2/RepDot.cpp:24:
layer2/RepDot.cpp: In function ‘RepDotDoNew(CoordSet*, cRepDot_t, int)’:
layer2/RepDot.cpp:463:46: warning: ‘vn’ may be used uninitialized [-Wmaybe-uninitialized]
  463 |     I->VN = ReallocForSure(I->VN, float, (vn - I->VN));
      |                                           ~~~^~~~~~~
layer2/RepDot.cpp:263:14: note: ‘vn’ was declared here
  263 |   float *v, *vn;
      |              ^~
layer2/ObjectMap.cpp: In function ‘ObjectMapDump(ObjectMap const*, char const*, int, int)’:
layer2/ObjectMap.cpp:5982:24: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 239 [-Wformat-truncation=]
 5982 |       " ObjectMapDump: %s written to %s\n", om->Name, fname ENDFB(om->G);
      |                        ^~
In file included from /usr/include/stdio.h:970,
                 from /usr/include/python3.13/Python.h:37,
                 from layer0/os_python.h:34,
                 from layer2/ObjectMap.cpp:21:
In function ‘snprintf’,
    inlined from ‘ObjectMapDump(ObjectMap const*, char const*, int, int)’ at layer2/ObjectMap.cpp:5981:5:
/usr/include/bits/stdio2.h:68:35: note: ‘__snprintf_chk’ output 30 or more bytes (assuming 285) into a destination of size 255
   68 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   69 |                                    __glibc_objsize (__s), __fmt,
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   70 |                                    __va_arg_pack ());
      |                                    ~~~~~~~~~~~~~~~~~
layer2/MmtfMoleculeReader.cpp: In function ‘ObjectMolecule* ObjectMoleculeReadMmtfStr(PyMOLGlobals*, ObjectMolecule*, const char*, int, int, int, int, int, int)’:
layer2/MmtfMoleculeReader.cpp:171:18: warning: the address of ‘MMTF_container::unitCell’ will never be NULL [-Waddress]
  171 |   if (container->unitCell &&
      |       ~~~~~~~~~~~^~~~~~~~
In file included from layer2/MmtfMoleculeReader.cpp:14:
contrib/mmtf-c/mmtf_parser.h:104:11: note: ‘MMTF_container::unitCell’ declared here
  104 |     float unitCell[6];
      |           ^~~~~~~~
layer2/MmtfMoleculeReader.cpp:223:47: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
  223 |         for (int l = 0, offset = atomIndex; l < group->bondAtomListCount / 2; ++l) {
      |                                             ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/14/cassert:44,
                 from layer0/vla.h:10,
                 from layer1/Symmetry.h:26,
                 from layer1/PyMOLObject.h:27,
                 from layer2/ObjectMolecule.h:24,
                 from layer2/MmtfMoleculeReader.cpp:9:
layer2/MmtfMoleculeReader.cpp:276:34: warning: comparison of integer expressions of different signedness: ‘std::vector<int>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  276 |     assert(cset->IdxToAtm.size() == cset->getNIndex());
      |            ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
layer2/MmtfMoleculeReader.cpp:287:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  287 |   for (int l = 0; l < container->bondAtomListCount / 2; ++l) {
      |                   ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer2/AtomInfo.cpp: In function ‘bool AtomResiFromResv(char*, size_t, int, char)’:
layer2/AtomInfo.cpp:817:56: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  817 |     return snprintf(resi, size, "%d%c", resv, inscode) < size;
      |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
layer2/AtomInfo.cpp:818:43: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  818 |   return snprintf(resi, size, "%d", resv) < size;
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
layer2/ObjectMap.cpp: In function ‘ObjectMapGRDStrToMap(ObjectMap*, char*, int, int, int) [clone .isra.0]’:
layer2/ObjectMap.cpp:4290:18: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 243 [-Wformat-truncation=]
 4290 |     " ObjectMap: %s\n", cc ENDFB(I->G);
      |                  ^~     ~~
In function ‘snprintf’,
    inlined from ‘ObjectMapGRDStrToMap(ObjectMap*, char*, int, int, int) [clone .isra.0]’ at layer2/ObjectMap.cpp:4289:3:
/usr/include/bits/stdio2.h:68:35: note: ‘__snprintf_chk’ output between 14 and 1037 bytes into a destination of size 255
   68 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   69 |                                    __glibc_objsize (__s), __fmt,
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   70 |                                    __va_arg_pack ());
      |                                    ~~~~~~~~~~~~~~~~~
layer2/ObjectMap.cpp: In function ‘ObjectMapGRDStrToMap(ObjectMap*, char*, int, int, int) [clone .isra.0]’:
layer2/ObjectMap.cpp:4290:18: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 243 [-Wformat-truncation=]
 4290 |     " ObjectMap: %s\n", cc ENDFB(I->G);
      |                  ^~     ~~
In function ‘snprintf’,
    inlined from ‘ObjectMapGRDStrToMap(ObjectMap*, char*, int, int, int) [clone .isra.0]’ at layer2/ObjectMap.cpp:4289:3:
/usr/include/bits/stdio2.h:68:35: note: ‘__snprintf_chk’ output between 14 and 1037 bytes into a destination of size 255
   68 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   69 |                                    __glibc_objsize (__s), __fmt,
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   70 |                                    __va_arg_pack ());
      |                                    ~~~~~~~~~~~~~~~~~
layer2/ObjectMap.cpp: In function ‘ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, char const*, int, int, int, int)’:
layer2/ObjectMap.cpp:2961:22: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 241 [-Wformat-truncation=]
 2961 |       " PHIStrToMap: %s\n", cc ENDFB(I->G);
      |                      ^~     ~~
In function ‘snprintf’,
    inlined from ‘ObjectMapPHIStrToMap(ObjectMap*, char*, int, int, int)’ at layer2/ObjectMap.cpp:2960:5,
    inlined from ‘ObjectMapReadPHIStr(PyMOLGlobals*, ObjectMap*, char*, int, int, int)’ at layer2/ObjectMap.cpp:4803:25,
    inlined from ‘ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, char const*, int, int, int, int)’ at layer2/ObjectMap.cpp:4835:28:
/usr/include/bits/stdio2.h:68:35: note: ‘__snprintf_chk’ output between 16 and 1039 bytes into a destination of size 255
   68 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   69 |                                    __glibc_objsize (__s), __fmt,
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   70 |                                    __va_arg_pack ());
      |                                    ~~~~~~~~~~~~~~~~~
layer2/ObjectMap.cpp: In function ‘ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, char const*, int, int, int, int)’:
layer2/ObjectMap.cpp:2970:22: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 241 [-Wformat-truncation=]
 2970 |       " PHIStrToMap: %s\n", cc ENDFB(I->G);
      |                      ^~     ~~
In function ‘snprintf’,
    inlined from ‘ObjectMapPHIStrToMap(ObjectMap*, char*, int, int, int)’ at layer2/ObjectMap.cpp:2969:5,
    inlined from ‘ObjectMapReadPHIStr(PyMOLGlobals*, ObjectMap*, char*, int, int, int)’ at layer2/ObjectMap.cpp:4803:25,
    inlined from ‘ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, char const*, int, int, int, int)’ at layer2/ObjectMap.cpp:4835:28:
/usr/include/bits/stdio2.h:68:35: note: ‘__snprintf_chk’ output between 16 and 1039 bytes into a destination of size 255
   68 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   69 |                                    __glibc_objsize (__s), __fmt,
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   70 |                                    __va_arg_pack ());
      |                                    ~~~~~~~~~~~~~~~~~
layer2/ObjectMap.cpp: In function ‘ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, char const*, int, int, int, int)’:
layer2/ObjectMap.cpp:2976:22: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 241 [-Wformat-truncation=]
 2976 |       " PHIStrToMap: %s\n", cc ENDFB(I->G);
      |                      ^~     ~~
In function ‘snprintf’,
    inlined from ‘ObjectMapPHIStrToMap(ObjectMap*, char*, int, int, int)’ at layer2/ObjectMap.cpp:2975:5,
    inlined from ‘ObjectMapReadPHIStr(PyMOLGlobals*, ObjectMap*, char*, int, int, int)’ at layer2/ObjectMap.cpp:4803:25,
    inlined from ‘ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, char const*, int, int, int, int)’ at layer2/ObjectMap.cpp:4835:28:
/usr/include/bits/stdio2.h:68:35: note: ‘__snprintf_chk’ output between 16 and 1039 bytes into a destination of size 255
   68 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   69 |                                    __glibc_objsize (__s), __fmt,
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   70 |                                    __va_arg_pack ());
      |                                    ~~~~~~~~~~~~~~~~~
layer2/ObjectMap.cpp: In function ‘ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, char const*, int, int, int, int)’:
layer2/ObjectMap.cpp:3058:22: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 241 [-Wformat-truncation=]
 3058 |       " PHIStrToMap: %s\n", cc ENDFB(I->G);
      |                      ^~     ~~
In function ‘snprintf’,
    inlined from ‘ObjectMapPHIStrToMap(ObjectMap*, char*, int, int, int)’ at layer2/ObjectMap.cpp:3057:5,
    inlined from ‘ObjectMapReadPHIStr(PyMOLGlobals*, ObjectMap*, char*, int, int, int)’ at layer2/ObjectMap.cpp:4803:25,
    inlined from ‘ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, char const*, int, int, int, int)’ at layer2/ObjectMap.cpp:4835:28:
/usr/include/bits/stdio2.h:68:35: note: ‘__snprintf_chk’ output between 16 and 1039 bytes into a destination of size 255
   68 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   69 |                                    __glibc_objsize (__s), __fmt,
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   70 |                                    __va_arg_pack ());
      |                                    ~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/14/cassert:44,
                 from layer0/Field.h:24,
                 from layer0/Isosurf.h:24,
                 from layer2/RepMesh.cpp:28:
layer0/Field.h: In instantiation of ‘T* CField::ptr(SizeTs ...) [with T = float; SizeTs = {int, int, int}]’:
layer2/RepMesh.cpp:970:27:   required from here
  155 | #define Ffloat3p(f, a, b, c) ((f)->ptr<float>(a, b, c))
      |                               ~~~~~~~~~~~~~~~^~~~~~~~~
layer0/Field.h:100:27: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare]
  100 |     assert(sizeof...(pos) <= n_dim());
      |            ~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /usr/include/c++/14/memory:78,
                 from layer0/os_python.h:23,
                 from layer2/RepMesh.cpp:17:
In member function ‘std::unique_ptr<CField, std::default_delete<CField> >::~unique_ptr()’,
    inlined from ‘pymol::cache_ptr<CField, std::default_delete<CField> >::~cache_ptr()’ at include/pymol/memory.h:89:7,
    inlined from ‘Isofield::~Isofield()’ at layer0/Isosurf.h:30:8,
    inlined from ‘RepMeshNew(CoordSet*, int)’ at layer2/RepMesh.cpp:1053:5:
/usr/include/c++/14/bits/unique_ptr.h:397:19: warning: ‘field’ may be used uninitialized [-Wmaybe-uninitialized]
  397 |         if (__ptr != nullptr)
      |             ~~~~~~^~~~~~~~~~
layer2/RepMesh.cpp: In function ‘RepMeshNew(CoordSet*, int)’:
layer2/RepMesh.cpp:715:13: note: ‘field’ was declared here
  715 |   Isofield *field;
      |             ^~~~~
In file included from layer1/PyMOLObject.h:26,
                 from layer2/ObjectMolecule.h:24,
                 from layer2/SideChainHelper.h:9,
                 from layer2/SideChainHelper.cpp:10:
In function ‘SettingUniqueGetTypedValuePtr(PyMOLGlobals*, int, int, int, bool*)’,
    inlined from ‘SettingUniqueGetIfDefined<bool>(PyMOLGlobals*, int, int, bool*)bool’ at layer1/Setting.h:447:39,
    inlined from ‘AtomSettingGetIfDefined<bool, AtomInfoType const>(PyMOLGlobals*, AtomInfoType const*, int, bool*)bool’ at layer2/AtomInfo.h:496:33,
    inlined from ‘AtomSettingGetWD<bool, AtomInfoType const>(PyMOLGlobals*, AtomInfoType const*, int, bool)bool’ at layer2/AtomInfo.h:506:36,
    inlined from ‘SideChainHelperMarkNonCartoonBonded(bool*, ObjectMolecule const*, CoordSet const*, bool, bool)’ at layer2/SideChainHelper.cpp:47:26:
layer1/Setting.h:436:11: warning: ‘out’ may be used uninitialized [-Wmaybe-uninitialized]
  436 |   int i = *out;
      |           ^~~~
In file included from layer2/ObjectMolecule.h:25:
layer2/AtomInfo.h: In function ‘SideChainHelperMarkNonCartoonBonded(bool*, ObjectMolecule const*, CoordSet const*, bool, bool)’:
layer2/AtomInfo.h:505:5: note: ‘out’ was declared here
  505 |   V out;
      |     ^~~
In function ‘SettingUniqueGetTypedValuePtr(PyMOLGlobals*, int, int, int, bool*)’,
    inlined from ‘SettingUniqueGetIfDefined<bool>(PyMOLGlobals*, int, int, bool*)bool’ at layer1/Setting.h:447:39,
    inlined from ‘AtomSettingGetIfDefined<bool, AtomInfoType const>(PyMOLGlobals*, AtomInfoType const*, int, bool*)bool’ at layer2/AtomInfo.h:496:33,
    inlined from ‘AtomSettingGetWD<bool, AtomInfoType const>(PyMOLGlobals*, AtomInfoType const*, int, bool)bool’ at layer2/AtomInfo.h:506:36,
    inlined from ‘SideChainHelperMarkNonCartoonBonded(bool*, ObjectMolecule const*, CoordSet const*, bool, bool)’ at layer2/SideChainHelper.cpp:49:26:
layer1/Setting.h:436:11: warning: ‘out’ may be used uninitialized [-Wmaybe-uninitialized]
  436 |   int i = *out;
      |           ^~~~
layer2/AtomInfo.h: In function ‘SideChainHelperMarkNonCartoonBonded(bool*, ObjectMolecule const*, CoordSet const*, bool, bool)’:
layer2/AtomInfo.h:505:5: note: ‘out’ was declared here
  505 |   V out;
      |     ^~~
In function ‘SettingUniqueGetTypedValuePtr(PyMOLGlobals*, int, int, int, bool*)’,
    inlined from ‘SettingUniqueGetIfDefined<bool>(PyMOLGlobals*, int, int, bool*)bool’ at layer1/Setting.h:447:39,
    inlined from ‘AtomSettingGetIfDefined<bool, AtomInfoType const>(PyMOLGlobals*, AtomInfoType const*, int, bool*)bool’ at layer2/AtomInfo.h:496:33,
    inlined from ‘AtomSettingGetWD<bool, AtomInfoType const>(PyMOLGlobals*, AtomInfoType const*, int, bool)bool’ at layer2/AtomInfo.h:506:36,
    inlined from ‘SideChainHelperMarkNonCartoonBonded(bool*, ObjectMolecule const*, CoordSet const*, bool, bool)’ at layer2/SideChainHelper.cpp:55:26:
layer1/Setting.h:436:11: warning: ‘out’ may be used uninitialized [-Wmaybe-uninitialized]
  436 |   int i = *out;
      |           ^~~~
layer2/AtomInfo.h: In function ‘SideChainHelperMarkNonCartoonBonded(bool*, ObjectMolecule const*, CoordSet const*, bool, bool)’:
layer2/AtomInfo.h:505:5: note: ‘out’ was declared here
  505 |   V out;
      |     ^~~
In function ‘SettingUniqueGetTypedValuePtr(PyMOLGlobals*, int, int, int, bool*)’,
    inlined from ‘SettingUniqueGetIfDefined<bool>(PyMOLGlobals*, int, int, bool*)bool’ at layer1/Setting.h:447:39,
    inlined from ‘AtomSettingGetIfDefined<bool, AtomInfoType const>(PyMOLGlobals*, AtomInfoType const*, int, bool*)bool’ at layer2/AtomInfo.h:496:33,
    inlined from ‘AtomSettingGetWD<bool, AtomInfoType const>(PyMOLGlobals*, AtomInfoType const*, int, bool)bool’ at layer2/AtomInfo.h:506:36,
    inlined from ‘SideChainHelperMarkNonCartoonBonded(bool*, ObjectMolecule const*, CoordSet const*, bool, bool)’ at layer2/SideChainHelper.cpp:57:26:
layer1/Setting.h:436:11: warning: ‘out’ may be used uninitialized [-Wmaybe-uninitialized]
  436 |   int i = *out;
      |           ^~~~
layer2/AtomInfo.h: In function ‘SideChainHelperMarkNonCartoonBonded(bool*, ObjectMolecule const*, CoordSet const*, bool, bool)’:
layer2/AtomInfo.h:505:5: note: ‘out’ was declared here
  505 |   V out;
      |     ^~~
layer2/ObjectMesh.cpp: In member function ‘ObjectMesh::update()’:
layer2/ObjectMesh.cpp:502:41: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 226 [-Wformat-truncation=]
  502 |           "ObjectMeshUpdate-Error: map '%s' has been deleted.\n", ms->MapName
      |                                         ^~
In file included from layer1/Ortho.h:32,
                 from layer1/Scene.h:23,
                 from layer2/ObjectMesh.cpp:33:
layer0/Feedback.h:274:15: note: ‘snprintf’ output between 50 and 305 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
layer2/ObjectMesh.cpp:535:40: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 232 [-Wformat-truncation=]
  535 |               " ObjectMesh: updating \"%s\".\n", I->Name ENDFB(G);
      |                                        ^~
layer0/Feedback.h:274:15: note: ‘snprintf’ output between 27 and 282 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
layer2/ObjectCGO.cpp: In function ‘PyObject* ObjectCGOAllStatesAsPyList(ObjectCGO*)’:
layer2/ObjectCGO.cpp:53:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectCGOState>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   53 |   for(a = 0; a < I->State.size(); a++) {
      |              ~~^~~~~~~~~~~~~~~~~
layer2/ObjectCGO.cpp: In function ‘int ObjectCGOAllStatesFromPyList(ObjectCGO*, PyObject*, int)’:
layer2/ObjectCGO.cpp:104:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectCGOState>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  104 |     for(a = 0; a < I->State.size(); a++) {
      |                ~~^~~~~~~~~~~~~~~~~
layer2/ObjectCGO.cpp: In member function ‘virtual void ObjectCGO::invalidate(cRep_t, cRepInv_t, int)’:
layer2/ObjectCGO.cpp:205:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectCGOState>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  205 |     if((state >= 0) && (state < I->State.size())) {
      |                         ~~~~~~^~~~~~~~~~~~~~~~~
layer2/ObjectCGO.cpp: In member function ‘virtual void ObjectCGO::render(RenderInfo*)’:
layer2/ObjectCGO.cpp:488:9: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
  488 |         if (!ray)
      |         ^~
layer2/ObjectCGO.cpp:490:11: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
  490 |           ObjectCGORenderState(G, pass, ray, I, info, sobj, color, ramp, use_shader, cgo_lighting);
      |           ^~~~~~~~~~~~~~~~~~~~
In file included from layer2/ObjectCGO.cpp:24:
layer2/ObjectCGO.h: In copy constructor ‘ObjectCGOState::ObjectCGOState(const ObjectCGOState&)’:
layer2/ObjectCGO.h:28:17: warning: ‘ObjectCGOState::G’ will be initialized after [-Wreorder]
   28 |   PyMOLGlobals* G;
      |                 ^
layer2/ObjectCGO.h:27:25: warning:   ‘pymol::cache_ptr<CGO> ObjectCGOState::renderCGO’ [-Wreorder]
   27 |   pymol::cache_ptr<CGO> renderCGO;
      |                         ^~~~~~~~~
layer2/ObjectCGO.cpp:517:1: warning:   when initialized here [-Wreorder]
  517 | ObjectCGOState::ObjectCGOState(const ObjectCGOState& other)
      | ^~~~~~~~~~~~~~
layer2/ObjectCGO.h:29:58: warning: ‘ObjectCGOState::hasOpaque’ will be initialized after [-Wreorder]
   29 |   bool renderWithShaders, hasTransparency, cgo_lighting, hasOpaque;
      |                                                          ^~~~~~~~~
layer2/ObjectCGO.h:29:44: warning:   ‘bool ObjectCGOState::cgo_lighting’ [-Wreorder]
   29 |   bool renderWithShaders, hasTransparency, cgo_lighting, hasOpaque;
      |                                            ^~~~~~~~~~~~
layer2/ObjectCGO.cpp:517:1: warning:   when initialized here [-Wreorder]
  517 | ObjectCGOState::ObjectCGOState(const ObjectCGOState& other)
      | ^~~~~~~~~~~~~~
layer2/ObjectCGO.cpp: In function ‘ObjectCGO* ObjectCGOFromCGO(PyMOLGlobals*, ObjectCGO*, CGO*, int)’:
layer2/ObjectCGO.cpp:602:22: warning: comparison of integer expressions of different signedness: ‘std::vector<ObjectCGOState>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  602 |   if(I->State.size() <= state) {
      |      ~~~~~~~~~~~~~~~~^~~~~~~~
layer2/ObjectCGO.cpp: In function ‘ObjectCGO* ObjectCGODefine(PyMOLGlobals*, ObjectCGO*, PyObject*, int)’:
layer2/ObjectCGO.cpp:667:22: warning: comparison of integer expressions of different signedness: ‘std::vector<ObjectCGOState>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  667 |   if(I->State.size() <= state) {
      |      ~~~~~~~~~~~~~~~~^~~~~~~~
layer2/ObjectCGO.cpp: In function ‘ObjectCGO* ObjectCGOFromFloatArray(PyMOLGlobals*, ObjectCGO*, float*, int, int, int)’:
layer2/ObjectCGO.cpp:725:22: warning: comparison of integer expressions of different signedness: ‘std::vector<ObjectCGOState>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  725 |   if(I->State.size() <= state) {
      |      ~~~~~~~~~~~~~~~~^~~~~~~~
layer2/ObjectMesh.cpp: In function ‘ObjectMeshDump(ObjectMesh*, char const*, int, int)’:
layer2/ObjectMesh.cpp:329:27: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 238 [-Wformat-truncation=]
  329 |         " ObjectMeshDump: %s written to %s\n", I->Name, fname ENDFB(I->G);
      |                           ^~
layer0/Feedback.h:274:15: note: ‘snprintf’ output 31 or more bytes (assuming 286) into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
layer3/AtomIterators.cpp: In member function ‘virtual bool SeleAtomIterator::next()’:
layer3/AtomIterators.cpp:61:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   61 |   while ((++a) < I->Table.size()) {
      |          ~~~~~~^~~~~~~~~~~~~~~~~
layer3/AtomIterators.cpp: In member function ‘virtual bool SeleCoordIterator::next()’:
layer3/AtomIterators.cpp:129:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  129 |   for (a++; a < I->Table.size(); a++) {
      |             ~~^~~~~~~~~~~~~~~~~
layer2/ObjectMolecule.cpp: In function ‘int ObjectMoleculeFillOpenValences(ObjectMolecule*, int)’:
layer2/ObjectMolecule.cpp:3531:14: warning: comparison of integer expressions of different signedness: ‘const unsigned int’ and ‘signed char’ [-Wsign-compare]
 3531 |       if((nn >= ai->valence) || (!flag))
      |           ~~~^~~~~~~~~~~~~~
layer2/ObjectMolecule.cpp: In function ‘pymol::Result<> ObjectMoleculeAddBondByIndices(ObjectMolecule*, unsigned int, unsigned int, int)’:
layer2/ObjectMolecule.cpp:4328:12: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
 4328 |   if (atm1 >= I->NAtom || atm2 >= I->NAtom) {
      |       ~~~~~^~~~~~~~~~~
layer2/ObjectMolecule.cpp:4328:32: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
 4328 |   if (atm1 >= I->NAtom || atm2 >= I->NAtom) {
      |                           ~~~~~^~~~~~~~~~~
layer2/ObjectMolecule.cpp: In member function ‘bool ObjectMolecule::atomHasAnyCoordinates(size_t) const’:
layer2/ObjectMolecule.cpp:11713:24: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare]
11713 |   for (size_t i = 0; i < NCSet; ++i) {
      |                      ~~^~~~~~~
layer3/Editor.cpp: In function ‘pymol::Result<> EditorSelect(PyMOLGlobals*, const char*, const char*, const char*, const char*, int, int, int)’:
layer3/Editor.cpp:776:7: warning: variable ‘result’ set but not used [-Wunused-but-set-variable]
  776 |   int result = false;
      |       ^~~~~~
layer2/RepRibbon.cpp: In function ‘RepRibbonNew(CoordSet*, int)’:
layer2/RepRibbon.cpp:378:15: warning: ‘MEM <vector(2) float> [(float *)_707]’ may be used uninitialized [-Wmaybe-uninitialized]
  378 |     *(v1++) = *(v++);           /* first segment */
      |               ^~~~~~
layer2/RepRibbon.cpp:380:15: warning: ‘MEM[(float *)_707 + 8B]’ may be used uninitialized [-Wmaybe-uninitialized]
  380 |     *(v1++) = *(v++);
      |               ^~~~~~
layer2/ObjectDist.cpp: In function ‘int ObjectDistMoveWithObject(ObjectDist*, ObjectMolecule*)’:
layer2/ObjectDist.cpp:111:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<pymol::copyable_ptr<DistSet> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  111 |   for (int i=0; i<I->DSet.size(); i++) {
      |                 ~^~~~~~~~~~~~~~~
layer2/ObjectDist.cpp: In function ‘void ObjectDistUpdateExtents(ObjectDist*)’:
layer2/ObjectDist.cpp:136:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<pymol::copyable_ptr<DistSet> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  136 |   for(int a = 0; a < I->DSet.size(); a++) {
      |                  ~~^~~~~~~~~~~~~~~~
layer2/ObjectDist.cpp: In function ‘PyObject* ObjectDistDSetAsPyList(ObjectDist*)’:
layer2/ObjectDist.cpp:148:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<pymol::copyable_ptr<DistSet> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  148 |   for(int a = 0; a < I->DSet.size(); a++) {
      |                  ~~^~~~~~~~~~~~~~~~
layer2/ObjectDist.cpp: In function ‘int ObjectDistDSetFromPyList(ObjectDist*, PyObject*)’:
layer2/ObjectDist.cpp:165:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<pymol::copyable_ptr<DistSet> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  165 |     for(int a = 0; a < I->DSet.size(); a++) {
      |                    ~~^~~~~~~~~~~~~~~~
layer2/ObjectDist.cpp: In member function ‘virtual void ObjectDist::update()’:
layer2/ObjectDist.cpp:241:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<pymol::copyable_ptr<DistSet> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  241 |   for(int a = 0; a < I->DSet.size(); a++)
      |                  ~~^~~~~~~~~~~~~~~~
layer2/ObjectDist.cpp: In function ‘void ObjectDistInvalidateRep(ObjectDist*, cRep_t)’:
layer2/ObjectDist.cpp:257:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<pymol::copyable_ptr<DistSet> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  257 |   for(a = 0; a < I->DSet.size(); a++)
      |              ~~^~~~~~~~~~~~~~~~
layer2/ObjectMolecule.cpp: In function ‘ObjectMoleculeMOLStr2CoordSet(PyMOLGlobals*, char const*, AtomInfoType**, char const**) [clone .constprop.0]’:
layer2/ObjectMolecule.cpp:7579:37: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 224 [-Wformat-truncation=]
 7579 |     " ObjMolMOLStr2CoordSet: title '%s'\n", nameTmp ENDFB(G)
      |                                     ^~      ~~~~~~~
In file included from layer1/Ortho.h:32,
                 from layer2/ObjectMolecule.cpp:31:
layer0/Feedback.h:274:15: note: ‘snprintf’ output between 34 and 289 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
layer2/ObjectMolecule.cpp:7627:16: warning: ‘strncpy’ output may be truncated copying 4 bytes from a string of length 1023 [-Wstringop-truncation]
 7627 |         strncpy(atInfo[a].elem, cc, cElemNameLen);
      |         ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Editor.cpp: In function ‘EditorDefineExtraPks(PyMOLGlobals*)’:
layer3/Editor.cpp:335:29: warning: ‘%s’ directive writing up to 255 bytes into a region of size 249 [-Wformat-overflow=]
  335 |     sprintf(buffer, "(byres %s)", name);
      |                             ^~    ~~~~
layer3/Editor.cpp:335:12: note: ‘sprintf’ output between 9 and 264 bytes into a destination of size 256
  335 |     sprintf(buffer, "(byres %s)", name);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Editor.cpp:337:31: warning: ‘%s’ directive writing up to 255 bytes into a region of size 247 [-Wformat-overflow=]
  337 |     sprintf(buffer, "(bychain %s)", name);
      |                               ^~    ~~~~
layer3/Editor.cpp:337:12: note: ‘sprintf’ output between 11 and 266 bytes into a destination of size 256
  337 |     sprintf(buffer, "(bychain %s)", name);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Editor.cpp:339:32: warning: ‘%s’ directive writing up to 255 bytes into a region of size 246 [-Wformat-overflow=]
  339 |     sprintf(buffer, "(byobject %s)", name);
      |                                ^~    ~~~~
layer3/Editor.cpp:339:12: note: ‘sprintf’ output between 12 and 267 bytes into a destination of size 256
  339 |     sprintf(buffer, "(byobject %s)", name);
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Editor.cpp: In function ‘EditorPrepareDrag(PyMOLGlobals*, pymol::CObject*, int, int, int, int)’:
layer3/Editor.cpp:1933:29: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 236 [-Wformat-truncation=]
 1933 |         " Editor: grabbing (%s).", name ENDFB(G);
      |                             ^~     ~~~~
In file included from layer1/Ortho.h:32,
                 from layer1/ButMode.h:20,
                 from layer3/Editor.cpp:28:
layer0/Feedback.h:274:15: note: ‘snprintf’ output between 22 and 277 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
layer2/ObjectMolecule.cpp: In function ‘ObjectMoleculeLoadRSTFile(PyMOLGlobals*, ObjectMolecule*, char const*, int, int, char)’:
layer2/ObjectMolecule.cpp:1382:10: warning: ‘buffer’ may be used uninitialized [-Wmaybe-uninitialized]
 1382 |     mfree(buffer);
layer2/ObjectMolecule.cpp:1279:9: note: ‘buffer’ was declared here
 1279 |   char *buffer, *p;
      |         ^~~~~~
layer2/ObjectMolecule.cpp: In member function ‘ObjectMolecule::update()’:
layer2/ObjectMolecule.cpp:10605:82: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size between 181 and 191 [-Wformat-truncation=]
10605 |               " ObjectMolecule-DEBUG: updating representations for state %d of \"%s\".\n",
      |                                                                                  ^~
layer0/Feedback.h:274:15: note: ‘snprintf’ output between 68 and 333 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
layer2/ObjectMolecule.cpp: In function ‘ObjectMoleculeMoveAtom(ObjectMolecule*, int, int, float const*, int, int)’:
layer2/ObjectMolecule.cpp:10731:43: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 1004 [-Wformat-overflow=]
10731 |       sprintf(line, "cmd.translate_atom(\"%s\",%15.9f,%15.9f,%15.9f,%d,%d,%d)\n",
      |                                           ^~
10732 |               buffer, v[0], v[1], v[2], state + 1, mode, 0);
      |               ~~~~~~                       
layer2/ObjectMolecule.cpp:10731:21: note: directive argument in the range [-2147483647, 2147483647]
10731 |       sprintf(line, "cmd.translate_atom(\"%s\",%15.9f,%15.9f,%15.9f,%d,%d,%d)\n",
      |                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer2/ObjectMolecule.cpp:10731:14: note: ‘sprintf’ output between 78 and 2036 bytes into a destination of size 1024
10731 |       sprintf(line, "cmd.translate_atom(\"%s\",%15.9f,%15.9f,%15.9f,%d,%d,%d)\n",
      |       ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
10732 |               buffer, v[0], v[1], v[2], state + 1, mode, 0);
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp: In function ‘pymol::Result<> ExecutiveIsosurfaceEtc(PyMOLGlobals*, const char*, const char*, float, const char*, float, int, float, int, int, int, int)’:
layer3/Executive.cpp:986:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectMapState>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  986 |         if(map_state >= mapObj->State.size())
      |            ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp: In function ‘pymol::Result<> ExecutiveIsomeshEtc(PyMOLGlobals*, const char*, const char*, float, const char*, float, int, float, int, int, int, float)’:
layer3/Executive.cpp:1132:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectMapState>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1132 |         if(map_state >= mapObj->State.size())
      |            ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp: In function ‘pymol::Result<> ExecutiveVolume(PyMOLGlobals*, const char*, const char*, float, const char*, float, int, float, int, int)’:
layer3/Executive.cpp:1305:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectMapState>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1305 |         if(map_state >= mapObj->State.size())
      |            ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/14/cassert:44,
                 from /usr/include/glm/detail/func_exponential.inl:8,
                 from /usr/include/glm/exponential.hpp:110,
                 from /usr/include/glm/detail/func_geometric.inl:1,
                 from /usr/include/glm/geometric.hpp:116,
                 from /usr/include/glm/detail/func_matrix.inl:1,
                 from /usr/include/glm/matrix.hpp:161,
                 from /usr/include/glm/detail/type_mat2x2.inl:1,
                 from /usr/include/glm/detail/type_mat2x2.hpp:176,
                 from /usr/include/glm/ext/matrix_double2x2.hpp:5,
                 from /usr/include/glm/mat2x2.hpp:5,
                 from /usr/include/glm/glm.hpp:120,
                 from layer3/Executive.cpp:114:
layer3/Executive.cpp: In function ‘pymol::Result<> ExecutiveSmooth(PyMOLGlobals*, const char*, int, int, int, int, int, int, float, bool)’:
layer3/Executive.cpp:6095:17: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare]
 6095 |   assert(n_atom == SelectorCountAtoms(G, sele, cStateAll));
      |          ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp:6155:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare]
 6155 |       for (int c = 0; c < n_atom; ++c) {
      |                       ~~^~~~~~~~
layer3/Executive.cpp: In function ‘pymol::Result<> ExecutiveMapSet(PyMOLGlobals*, const char*, int, const char*, int, int, int, int)’:
layer3/Executive.cpp:6325:34: warning: comparison of integer expressions of different signedness: ‘std::vector<ObjectMapState>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
 6325 |             if(obj->State.size() > max_n_state)
      |                ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
layer3/Executive.cpp:6436:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectMapState>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 6436 |                     if(src_state < obj->State.size()) {
      |                        ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp: In function ‘float ExecutiveRMSPairs(PyMOLGlobals*, const std::vector<SelectorTmp>&, int, bool)’:
layer3/Executive.cpp:11035:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
11035 |   for(a = 0; a < pairs; a++) {
      |              ~~^~~~~~~
layer3/Executive.cpp:11040:10: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
11040 |     if(a < (pairs - 1))
      |        ~~^~~~~~~~~~~~~
layer3/Executive.cpp: In function ‘pymol::Result<> ExecutiveColor(PyMOLGlobals*, const char*, const char*, int, int)’:
layer3/Executive.cpp:12401:7: warning: variable ‘ok’ set but not used [-Wunused-but-set-variable]
12401 |   int ok = false;
      |       ^~
layer3/Executive.cpp: In function ‘void ExecutiveSymExp(PyMOLGlobals*, const char*, const char*, const char*, float, int, int)’:
layer3/Executive.cpp:14066:40: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
14066 |             for (unsigned idx = 0; idx < cs->NIndex; ++idx) {
      |                                    ~~~~^~~~~~~~~~~~
layer3/Executive.cpp:14093:40: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
14093 |             for (unsigned atm = 0; atm < new_obj->NAtom; ++atm) {
      |                                    ~~~~^~~~~~~~~~~~~~~~
In file included from layer3/Executive.cpp:51:
layer3/Executive.cpp: In lambda function:
layer0/ListMacros.h:100:9: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation]
  100 |         else \
      |         ^~~~
layer0/ListMacros.h:141:4: note: in expansion of macro ‘ListDetach’
  141 |    ListDetach(List,copy,Link,ElemType); \
      |    ^~~~~~~~~~
layer3/Executive.cpp:14194:7: note: in expansion of macro ‘ListDelete’
14194 |       ListDelete(I->Spec, rec, next, SpecRec);        /* NOTE: order N in list length! TO FIX */
      |       ^~~~~~~~~~
layer0/ListMacros.h:102:11: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’
  102 |           (Elem)->Link = NULL; \
      |           ^
layer0/ListMacros.h:141:4: note: in expansion of macro ‘ListDetach’
  141 |    ListDetach(List,copy,Link,ElemType); \
      |    ^~~~~~~~~~
layer3/Executive.cpp:14194:7: note: in expansion of macro ‘ListDelete’
14194 |       ListDelete(I->Spec, rec, next, SpecRec);        /* NOTE: order N in list length! TO FIX */
      |       ^~~~~~~~~~
layer3/Executive.cpp: In lambda function:
layer0/ListMacros.h:100:9: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation]
  100 |         else \
      |         ^~~~
layer0/ListMacros.h:141:4: note: in expansion of macro ‘ListDetach’
  141 |    ListDetach(List,copy,Link,ElemType); \
      |    ^~~~~~~~~~
layer3/Executive.cpp:14206:7: note: in expansion of macro ‘ListDelete’
14206 |       ListDelete(I->Spec, rec, next, SpecRec);        /* NOTE: order N in list length! TO FIX */
      |       ^~~~~~~~~~
layer0/ListMacros.h:102:11: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’
  102 |           (Elem)->Link = NULL; \
      |           ^
layer0/ListMacros.h:141:4: note: in expansion of macro ‘ListDetach’
  141 |    ListDetach(List,copy,Link,ElemType); \
      |    ^~~~~~~~~~
layer3/Executive.cpp:14206:7: note: in expansion of macro ‘ListDelete’
14206 |       ListDelete(I->Spec, rec, next, SpecRec);        /* NOTE: order N in list length! TO FIX */
      |       ^~~~~~~~~~
layer3/Executive.cpp: In member function ‘virtual int CExecutive::click(int, int, int, int)’:
layer3/Executive.cpp:14873:68: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
14873 |               if(((panel->is_group) && (((xx) - 1) / DIP2PIXEL(8)) > (panel->nest_level + 1)) ||
      |                                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp:14874:69: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
14874 |                  ((!panel->is_group) && (((xx) - 1) / DIP2PIXEL(8)) > panel->nest_level)) {
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp: In member function ‘virtual int CExecutive::release(int, int, int, int)’:
layer3/Executive.cpp:15162:65: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
15162 |                (((panel->is_group) && ((xx - 1) / DIP2PIXEL(8)) > (panel->nest_level + 1)) ||
      |                                       ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp:15163:66: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
15163 |                 ((!panel->is_group) && ((xx - 1) / DIP2PIXEL(8)) > panel->nest_level))) {
      |                                        ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp: In member function ‘virtual int CExecutive::drag(int, int, int)’:
layer3/Executive.cpp:15304:70: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
15304 |                   if(((panel->is_group) && ((xx - 1) / DIP2PIXEL(8)) > (panel->nest_level + 1)) ||
      |                                            ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp:15305:71: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
15305 |                      ((!panel->is_group) && ((xx - 1) / DIP2PIXEL(8)) > panel->nest_level)) {
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp:15340:71: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
15340 |                   if(!((panel->is_group) && ((xx - 1) / DIP2PIXEL(8)) > (panel->nest_level + 1))) {
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from layer0/OOMac.h:22,
                 from layer3/Executive.cpp:37:
layer3/Executive.cpp: In function ‘void ExecutiveFree(PyMOLGlobals*)’:
layer0/MemoryDebug.h:86:32: warning: deleting object of polymorphic class type ‘CExecutive’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
   86 | #define DeleteP(ptr) {if(ptr) {delete ptr;ptr=NULL;}}
layer3/Executive.cpp:16294:3: note: in expansion of macro ‘DeleteP’
16294 |   DeleteP(G->Executive);
      |   ^~~~~~~
layer3/Executive.cpp: In function ‘pymol::Result<> ExecutiveSliceNew(PyMOLGlobals*, const char*, const char*, int, int)’:
layer3/Executive.cpp:16607:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectMapState>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
16607 |         if(map_state >= mapObj->State.size())
      |            ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
In file included from layer3/Executive.h:38,
                 from layer3/Executive.cpp:38:
layer0/TrackerList.h: In instantiation of ‘pymol::TrackerAdapter<T>::TrackerAdapterIterator<IsConst>::TrackerAdapterIterator(CTracker*, int) [with bool IsConst = false; T = SpecRec]’:
layer0/TrackerList.h:99:29:   required from ‘pymol::TrackerAdapter<T>::iterator pymol::TrackerAdapter<T>::begin() [with T = SpecRec; iterator = pymol::TrackerAdapter<SpecRec>::TrackerAdapterIterator<false>]’
   99 |   iterator begin() { return iterator(m_tracker, m_list_id); }
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp:202:62:   required from here
  202 |   for (auto& rec : ExecutiveGetSpecRecsFromPattern(G, pattern)) {
      |                                                              ^
layer0/TrackerList.h:80:15: warning: ‘pymol::TrackerAdapter<SpecRec>::TrackerAdapterIterator<false>::m_tracker’ will be initialized after [-Wreorder]
   80 |     CTracker* m_tracker;
      |               ^~~~~~~~~
layer0/TrackerList.h:79:9: warning:   ‘int pymol::TrackerAdapter<SpecRec>::TrackerAdapterIterator<false>::m_iter_id’ [-Wreorder]
   79 |     int m_iter_id = -1;
      |         ^~~~~~~~~
layer0/TrackerList.h:35:14: warning:   when initialized here [-Wreorder]
   35 |     explicit TrackerAdapterIterator(CTracker* tracker, int list_id)
      |              ^~~~~~~~~~~~~~~~~~~~~~
In function ‘ObjectMoleculeXYZStr2CoordSet(PyMOLGlobals*, char const*, AtomInfoType**, char const**)’,
    inlined from ‘ObjectMoleculeReadStr(PyMOLGlobals*, ObjectMolecule*, char const**, cLoadType_t, int, int, int, int, char*, short, _OVLexicon*)’ at layer2/ObjectMolecule.cpp:8551:43:
layer2/RepSurface.cpp: In function ‘void RepSurfaceSmoothEdges(RepSurface*)’:
layer2/RepSurface.cpp:4403:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 4403 |     for (auto j = 0; j < edges[i].size(); j += 3) {
      |                      ~~^~~~~~~~~~~~~~~~~
layer2/RepSurface.cpp:4415:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 4415 |     for (auto j = 0; j < edges[i].size(); j += 3) {
      |                      ~~^~~~~~~~~~~~~~~~~
layer2/ObjectMolecule.cpp:2898:16: warning: ‘strncpy’ output may be truncated copying 4 bytes from a string of length 1023 [-Wstringop-truncation]
 2898 |         strncpy(ai->elem, cc, cElemNameLen);
      |         ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer2/RepSurface.cpp:4426:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 4426 |     for (auto i = 0; i < unique_edges.size(); i += 2) {
      |                      ~~^~~~~~~~~~~~~~~~~~~~~
layer4/Cmd.cpp: In function ‘PyObject* CmdPushUndo(PyObject*, PyObject*)’:
layer4/Cmd.cpp:2216:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
 2216 |     if(ok)
      |     ^~
layer4/Cmd.cpp:2218:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
 2218 |       if(s0[0])
      |       ^~
layer4/Cmd.cpp: In function ‘PyObject* CmdGetMinMax(PyObject*, PyObject*)’:
layer4/Cmd.cpp:4469:7: warning: variable ‘ok’ set but not used [-Wunused-but-set-variable]
 4469 |   int ok = false;
      |       ^~
In file included from layer4/Cmd.cpp:77:
layer1/PConv.h: In instantiation of ‘PyObject* PConvToPyObject(const std::array<_Tp, _Nm>&) [with T = float; long unsigned int N = 3; PyObject = _object]’:
layer4/Cmd.cpp:380:27:   required from ‘PyObject* APIResult(PyMOLGlobals*, pymol::Result<T>&) [with T = std::array<float, 3>; PyObject = _object]’
  380 |     return PConvToPyObject(res.result());
      |            ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
layer4/Cmd.cpp:4034:19:   required from here
 4034 |   return APIResult(G, result);
      |          ~~~~~~~~~^~~~~~~~~~~
layer1/PConv.h:259:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
  259 |   for (int i = 0; i < N; ++i) {
      |                   ~~^~~
layer3/Executive.cpp: In function ‘ExecutiveRemoveAtoms(PyMOLGlobals*, char const*, int)’:
layer3/Executive.cpp:9007:58: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size between 207 and 217 [-Wformat-truncation=]
 9007 |                 " Remove: eliminated %d atoms in model \"%s\".\n",
      |                                                          ^~
In file included from layer1/Ortho.h:32,
                 from layer3/ExecutiveDef.h:3,
                 from layer3/Executive.h:29:
layer0/Feedback.h:274:15: note: ‘snprintf’ output between 42 and 307 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
layer3/Executive.cpp: In function ‘ExecutiveSetBondSettingFromString(PyMOLGlobals*, int, char const*, char const*, char const*, int, int, int)’:
layer3/Executive.cpp:11424:28: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=]
11424 |                 " Setting: %s set for %d bonds in object \"%s\".\n",
      |                            ^~
11425 |                 name, nSet, obj->Name ENDF(G);
      |                 ~~~~        
layer3/Executive.cpp:11424:17: note: directive argument in the range [1, 2147483647]
11424 |                 " Setting: %s set for %d bonds in object \"%s\".\n",
      |                 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer0/Feedback.h:282:53: note: ‘snprintf’ output between 42 and 560 bytes into a destination of size 255
  282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |                                                     ^
layer2/ObjectMolecule2.cpp: In function ‘bool ObjectMoleculeConnect(ObjectMolecule*, int&, pymol::vla<BondType>&, CoordSet*, int, int, bool)’:
layer2/ObjectMolecule2.cpp:3750:28: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
 3750 |     for (unsigned i = 0; i < cs->NIndex; ++i) {
      |                          ~~^~~~~~~~~~~~
layer3/Executive.cpp: In function ‘ExecutiveGetBondSetting(PyMOLGlobals*, int, char*, char const*, int, int, int)’:
layer3/Executive.cpp:11505:26: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=]
11505 |               " Getting: %s for %d bonds in object \"%s\".\n",
      |                          ^~
11506 |               name, nSet, obj->Name ENDF(G);
      |               ~~~~        
layer3/Executive.cpp:11505:15: note: directive argument in the range [1, 2147483647]
11505 |               " Getting: %s for %d bonds in object \"%s\".\n",
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer0/Feedback.h:282:53: note: ‘snprintf’ output between 38 and 556 bytes into a destination of size 255
  282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |                                                     ^
layer2/ObjectMolecule2.cpp: In lambda function:
layer2/ObjectMolecule2.cpp:3779:15: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘const int’ [-Wsign-compare]
 3779 |         if (i <= j && !symop)
      |             ~~^~~~
layer2/ObjectMolecule2.cpp: In function ‘bool ObjectMoleculeConnect(ObjectMolecule*, int&, pymol::vla<BondType>&, CoordSet*, int, int, bool)’:
layer2/ObjectMolecule2.cpp:3884:30: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
 3884 |       for (unsigned i = 0; i < cs->NIndex; ++i) {
      |                            ~~^~~~~~~~~~~~
layer2/ObjectMolecule2.cpp:3900:28: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
 3900 |     for (unsigned a = 0; a < cs->NTmpBond; ++a) {
      |                          ~~^~~~~~~~~~~~~~
layer2/ObjectMolecule2.cpp:3950:28: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
 3950 |     for (unsigned a = 0; a < cs->NTmpLinkBond; ++a) {
      |                          ~~^~~~~~~~~~~~~~~~~~
layer3/Executive.cpp: In function ‘ExecutiveSetBondSetting(PyMOLGlobals*, int, _object*, char const*, char const*, int, int, int)’:
layer3/Executive.cpp:11605:62: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size between 208 and 217 [-Wformat-truncation=]
11605 |                   " Setting: %s set for %d bonds in object \"%s\".\n",
      |                                                              ^~
layer0/Feedback.h:282:53: note: ‘snprintf’ output 42 or more bytes (assuming 306) into a destination of size 255
  282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |                                                     ^
layer3/Executive.cpp: In function ‘ExecutiveUnsetBondSetting(PyMOLGlobals*, int, char const*, char const*, int, int, int)’:
layer3/Executive.cpp:11684:26: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=]
11684 |               " Setting: %s unset for %d bonds in object \"%s\".\n",
      |                          ^~
11685 |               name, nSet, rec->obj->Name ENDF(G);
      |               ~~~~        
layer3/Executive.cpp:11684:15: note: directive argument in the range [1, 2147483647]
11684 |               " Setting: %s unset for %d bonds in object \"%s\".\n",
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer0/Feedback.h:282:53: note: ‘snprintf’ output between 44 and 562 bytes into a destination of size 255
  282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |                                                     ^
layer3/Executive.cpp: In function ‘ExecutiveSetObjSettingFromString(PyMOLGlobals*, int, char const*, pymol::CObject*, int, int, int)’:
layer3/Executive.cpp:12226:30: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=]
12226 |                   " Setting: %s set to %s in object \"%s\", state %d.\n",
      |                              ^~
12227 |                   name, value2, obj->Name, state + 1 ENDF(G);
      |                   ~~~~        
layer3/Executive.cpp:12226:19: note: directive argument in the range [1, 2147483647]
12226 |                   " Setting: %s set to %s in object \"%s\", state %d.\n",
      |                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer0/Feedback.h:282:53: note: ‘snprintf’ output between 43 and 1584 bytes into a destination of size 255
  282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |                                                     ^
layer3/Executive.cpp:12218:30: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=]
12218 |                   " Setting: %s set to %s in object \"%s\".\n",
      |                              ^~
12219 |                   name, value2, obj->Name ENDF(G);
      |                   ~~~~        
layer0/Feedback.h:282:53: note: ‘snprintf’ output between 34 and 1566 bytes into a destination of size 255
  282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |                                                     ^
layer3/Executive.cpp:12197:29: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=]
12197 |           PRINTF " Setting: %s set to %s.\n", name, value2 ENDF(G);
      |                             ^~                ~~~~
layer0/Feedback.h:282:53: note: ‘snprintf’ output between 21 and 1298 bytes into a destination of size 255
  282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |                                                     ^
layer3/Executive.cpp: In function ‘ExecutiveSetSettingFromString(PyMOLGlobals*, int, char const*, char const*, int, int, int)’:
layer3/Executive.cpp:12129:36: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=]
12129 |                         " Setting: %s set for %d atoms in object \"%s\".\n",
      |                                    ^~
12130 |                         name, op.i4, rec->obj->Name ENDF(G);
      |                         ~~~~        
layer0/Feedback.h:282:53: note: ‘snprintf’ output between 42 and 561 bytes into a destination of size 255
  282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |                                                     ^
layer3/Executive.cpp:12097:32: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=]
12097 |                     " Setting: %s set to %s in %d objects, state %d.\n",
      |                                ^~
12098 |                     name, value2, nObj, state + 1 ENDF(G);
      |                     ~~~~        
layer3/Executive.cpp:12097:21: note: directive argument in the range [1, 2147483647]
12097 |                     " Setting: %s set to %s in %d objects, state %d.\n",
      |                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp:12097:21: note: directive argument in the range [1, 2147483647]
layer0/Feedback.h:282:53: note: ‘snprintf’ output between 43 and 1338 bytes into a destination of size 255
  282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |                                                     ^
layer3/Executive.cpp:12094:32: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=]
12094 |                     " Setting: %s set to %s in %d objects.\n", name, value2, nObj ENDF(G);
      |                                ^~                              ~~~~
layer3/Executive.cpp:12094:21: note: directive argument in the range [1, 2147483647]
12094 |                     " Setting: %s set to %s in %d objects.\n", name, value2, nObj ENDF(G);
      |                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer0/Feedback.h:282:53: note: ‘snprintf’ output between 34 and 1320 bytes into a destination of size 255
  282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |                                                     ^
layer3/Executive.cpp:12161:36: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=]
12161 |                         " Setting: %s set to %s in object \"%s\", state %d.\n",
      |                                    ^~
12162 |                         name, value2, rec->obj->Name, state + 1 ENDF(G);
      |                         ~~~~        
layer3/Executive.cpp:12161:25: note: directive argument in the range [1, 2147483647]
12161 |                         " Setting: %s set to %s in object \"%s\", state %d.\n",
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer0/Feedback.h:282:53: note: ‘snprintf’ output between 43 and 1584 bytes into a destination of size 255
  282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |                                                     ^
layer3/Executive.cpp:12153:36: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=]
12153 |                         " Setting: %s set to %s in object \"%s\".\n",
      |                                    ^~
12154 |                         name, value2, rec->obj->Name ENDF(G);
      |                         ~~~~        
layer0/Feedback.h:282:53: note: ‘snprintf’ output between 34 and 1566 bytes into a destination of size 255
  282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |                                                     ^
layer3/Executive.cpp:12057:29: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=]
12057 |           PRINTF " Setting: %s set to %s.\n", name, value2 ENDF(G);
      |                             ^~                ~~~~
layer0/Feedback.h:282:53: note: ‘snprintf’ output between 21 and 1298 bytes into a destination of size 255
  282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |                                                     ^
layer3/Executive.cpp: In function ‘ExecutiveSetSymmetry(PyMOLGlobals*, pymol::zstring_view, int, CSymmetry const&, bool)’:
layer3/Executive.cpp:5951:43: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 202 [-Wformat-truncation=]
 5951 |       " %s-Details: Updated symmetry for '%s'\n", __func__, obj->Name ENDFB(G);
      |                                           ^~
layer0/Feedback.h:274:15: note: ‘snprintf’ output between 56 and 311 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
layer3/Executive.cpp:5942:46: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 199 [-Wformat-truncation=]
 5942 |       " %s-Warning: Cannot set symmetry for '%s' (type %s)\n", __func__,
      |                                              ^~
layer0/Feedback.h:274:15: note: ‘snprintf’ output between 84 and 339 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
layer2/ObjectMolecule2.cpp: In function ‘ObjectMoleculeAddPseudoatom(ObjectMolecule*, int, char const*, char const*, char const*, char const*, char const*, char const*, float, int, float, float, char const*, float const*, int, int, int, int)’:
layer2/ObjectMolecule2.cpp:335:27: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 238 [-Wformat-truncation=]
  335 |         " ObjMol: created %s/%s/%s/%s`%d%c/%s\n",
      |                           ^~
In file included from /usr/include/stdio.h:970,
                 from /usr/include/python3.13/Python.h:37,
                 from layer0/os_python.h:34,
                 from layer2/ObjectMolecule2.cpp:24:
In function ‘snprintf’,
    inlined from ‘ObjectMoleculeAddPseudoatom(ObjectMolecule*, int, char const*, char const*, char const*, char const*, char const*, char const*, float, int, float, float, char const*, float const*, int, int, int, int)’ at layer2/ObjectMolecule2.cpp:334:7:
/usr/include/bits/stdio2.h:68:35: note: ‘__snprintf_chk’ output between 26 and 291 bytes into a destination of size 255
   68 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   69 |                                    __glibc_objsize (__s), __fmt,
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   70 |                                    __va_arg_pack ());
      |                                    ~~~~~~~~~~~~~~~~~
layer3/Executive.cpp: In function ‘ExecutiveBond(PyMOLGlobals*, char const*, char const*, int, int, int, pymol::zstring_view)’:
layer3/Executive.cpp:9358:53: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size between 214 and 224 [-Wformat-truncation=]
 9358 |                   " Bond: %d bonds added to model \"%s\".\n", cnt, rec->obj->Name
      |                                                     ^~
layer0/Feedback.h:274:15: note: ‘snprintf’ output between 35 and 300 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
layer3/Executive.cpp:9371:67: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size between 200 and 210 [-Wformat-truncation=]
 9371 |                   " Valence: %d bond valences adjusted in model \"%s\".\n", cnt,
      |                                                                   ^~
layer0/Feedback.h:274:15: note: ‘snprintf’ output between 49 and 314 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
layer3/Executive.cpp:9383:59: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size between 208 and 218 [-Wformat-truncation=]
 9383 |                   " Unbond: %d bonds removed from model \"%s\".\n",
      |                                                           ^~
layer0/Feedback.h:274:15: note: ‘snprintf’ output between 41 and 306 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
layer3/Executive.cpp: In function ‘ExecutiveSetSetting(PyMOLGlobals*, int, _object*, pymol::zstring_view, int, int, int)’:
layer3/Executive.cpp:11877:70: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 217 [-Wformat-truncation=]
11877 |                           " Setting: %s set for %d atoms in object \"%s\".\n",
      |                                                                      ^~
layer0/Feedback.h:282:53: note: ‘snprintf’ output 42 or more bytes (assuming 297) into a destination of size 255
  282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |                                                     ^
layer3/Executive.cpp:11788:42: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 237 [-Wformat-truncation=]
11788 |                     " Setting: %s set to %s in %d objects, state %d.\n",
      |                                          ^~
11789 |                     name, value, nObj, state + 1 ENDF(G);
      |                           ~~~~~           
layer3/Executive.cpp:11788:21: note: directive argument in the range [1, 2147483647]
11788 |                     " Setting: %s set to %s in %d objects, state %d.\n",
      |                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp:11788:21: note: directive argument in the range [1, 2147483647]
layer0/Feedback.h:282:53: note: ‘snprintf’ output 43 or more bytes (assuming 1084) into a destination of size 255
  282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |                                                     ^
layer3/Executive.cpp:11785:42: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 237 [-Wformat-truncation=]
11785 |                     " Setting: %s set to %s in %d objects.\n", name, value, nObj ENDF(G);
      |                                          ^~                          ~~~~~
layer3/Executive.cpp:11785:21: note: directive argument in the range [1, 2147483647]
11785 |                     " Setting: %s set to %s in %d objects.\n", name, value, nObj ENDF(G);
      |                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer0/Feedback.h:282:53: note: ‘snprintf’ output 34 or more bytes (assuming 1066) into a destination of size 255
  282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |                                                     ^
layer3/Executive.cpp:11909:46: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 237 [-Wformat-truncation=]
11909 |                         " Setting: %s set to %s in object \"%s\", state %d.\n",
      |                                              ^~
11910 |                         name, value, rec->obj->Name, state + 1 ENDF(G);
      |                               ~~~~~           
layer3/Executive.cpp:11909:25: note: directive argument in the range [1, 2147483647]
11909 |                         " Setting: %s set to %s in object \"%s\", state %d.\n",
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer0/Feedback.h:282:53: note: ‘snprintf’ output 43 or more bytes (assuming 1330) into a destination of size 255
  282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |                                                     ^
layer3/Executive.cpp:11902:46: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 237 [-Wformat-truncation=]
11902 |                         " Setting: %s set to %s in object \"%s\".\n",
      |                                              ^~
11903 |                         name, value, rec->obj->Name ENDF(G);
      |                               ~~~~~           
layer0/Feedback.h:282:53: note: ‘snprintf’ output 34 or more bytes (assuming 1312) into a destination of size 255
  282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |                                                     ^
layer3/Executive.cpp:11744:39: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 237 [-Wformat-truncation=]
11744 |           PRINTF " Setting: %s set to %s.\n", name, value ENDF(G);
      |                                       ^~            ~~~~~
layer0/Feedback.h:282:53: note: ‘snprintf’ output 21 or more bytes (assuming 1044) into a destination of size 255
  282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |                                                     ^
layer2/ObjectMolecule3.cpp: In function ‘std::vector<int> ObjectMoleculeGetMolMappingVec(const ObjectMolecule&)’:
layer2/ObjectMolecule3.cpp:42:24: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare]
   42 |   for (size_t b = 0; b < objmol.NBond; ++b) {
      |                      ~~^~~~~~~~~~~~~~
layer3/Executive.cpp: In function ‘ExecutiveUnsetSetting(PyMOLGlobals*, int, pymol::zstring_view, int, int, int)’:
layer3/Executive.cpp:12338:68: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 215 [-Wformat-truncation=]
12338 |                       " Setting: %s unset for %d atoms in object \"%s\".\n",
      |                                                                    ^~
layer0/Feedback.h:282:53: note: ‘snprintf’ output 44 or more bytes (assuming 299) into a destination of size 255
  282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |                                                     ^
layer3/Executive.cpp:12360:57: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 227 [-Wformat-truncation=]
12360 |                         " Setting: %s unset in object \"%s\", state %d.\n",
      |                                                         ^~
layer3/Executive.cpp:12360:25: note: directive argument in the range [1, 2147483647]
12360 |                         " Setting: %s unset in object \"%s\", state %d.\n",
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer0/Feedback.h:282:53: note: ‘snprintf’ output 41 or more bytes (assuming 305) into a destination of size 255
  282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |                                                     ^
layer3/Executive.cpp:12354:57: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 227 [-Wformat-truncation=]
12354 |                         " Setting: %s unset in object \"%s\".\n",
      |                                                         ^~
layer0/Feedback.h:282:53: note: ‘snprintf’ output 32 or more bytes (assuming 287) into a destination of size 255
  282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |                                                     ^
layer2/ObjectMolecule3.cpp: In function ‘void ObjectMoleculePBCUnwrap(ObjectMolecule&, bool)’:
layer2/ObjectMolecule3.cpp:151:34: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
  151 |       for (unsigned atm = 0; atm != objmol.NAtom; ++atm) {
      |                              ~~~~^~~~~~~~~~~~~~~
In file included from layer0/OOMac.h:22,
                 from layer4/PopUp.cpp:23:
layer4/PopUp.cpp: In function ‘void PopUpFree(Block*)’:
layer0/MemoryDebug.h:86:32: warning: deleting object of polymorphic class type ‘CPopUp’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
   86 | #define DeleteP(ptr) {if(ptr) {delete ptr;ptr=NULL;}}
layer4/PopUp.cpp:401:3: note: in expansion of macro ‘DeleteP’
  401 |   DeleteP(I);
      |   ^~~~~~~
layer2/ObjectSlice.cpp: In function ‘PyObject* ObjectSliceAllStatesAsPyList(ObjectSlice*)’:
layer2/ObjectSlice.cpp:78:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectSliceState>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   78 |   for(a = 0; a < I->State.size(); a++) {
      |              ~~^~~~~~~~~~~~~~~~~
layer2/ObjectSlice.cpp: In member function ‘virtual void ObjectSlice::invalidate(cRep_t, cRepInv_t, int)’:
layer2/ObjectSlice.cpp:210:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectSliceState>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  210 |   for(a = 0; a < State.size(); a++) {
      |              ~~^~~~~~~~~~~~~~
layer2/ObjectSlice.cpp: In member function ‘virtual void ObjectSlice::update()’:
layer2/ObjectSlice.cpp:633:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectSliceState>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  633 |   for(a = 0; a < I->State.size(); a++) {
      |              ~~^~~~~~~~~~~~~~~~~
layer2/ObjectSlice.cpp: In function ‘void ObjectSliceDrag(ObjectSlice*, int, int, float*, float*, float*)’:
layer2/ObjectSlice.cpp:679:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectSliceState>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  679 |     if(state < I->State.size())
      |        ~~~~~~^~~~~~~~~~~~~~~~~
layer2/ObjectSlice.cpp: In function ‘int ObjectSliceGetVertex(ObjectSlice*, int, int, float*)’:
layer2/ObjectSlice.cpp:750:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectSliceState>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  750 |     if(state < I->State.size())
      |        ~~~~~~^~~~~~~~~~~~~~~~~
layer2/ObjectSlice.cpp: In member function ‘virtual void ObjectSlice::render(RenderInfo*)’:
layer2/ObjectSlice.cpp:925:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectSliceState>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  925 |       if(state < I->State.size())
      |          ~~~~~~^~~~~~~~~~~~~~~~~
layer2/ObjectSlice.cpp:967:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectSliceState>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  967 |         if(cur_state >= I->State.size())
      |            ~~~~~~~~~~^~~~~~~~~~~~~~~~~~
layer2/ObjectSlice.cpp:981:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectSliceState>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  981 |     if(state < I->State.size())
      |        ~~~~~~^~~~~~~~~~~~~~~~~
layer2/ObjectSlice.cpp:1226:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectSliceState>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1226 |     if(cur_state >= I->State.size())
      |        ~~~~~~~~~~^~~~~~~~~~~~~~~~~~
layer2/ObjectSlice.cpp: In function ‘ObjectSliceState* ObjectSliceStateGetActive(ObjectSlice*, int)’:
layer2/ObjectSlice.cpp:1244:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectSliceState>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1244 |     if(state < I->State.size()) {
      |        ~~~~~~^~~~~~~~~~~~~~~~~
layer2/ObjectSlice.cpp: In function ‘ObjectSlice* ObjectSliceFromMap(PyMOLGlobals*, ObjectSlice*, ObjectMap*, int, int)’:
layer2/ObjectSlice.cpp:1285:22: warning: comparison of integer expressions of different signedness: ‘std::vector<ObjectSliceState>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
 1285 |   if(I->State.size() <= state) {
      |      ~~~~~~~~~~~~~~~~^~~~~~~~
layer2/ObjectSlice.cpp: In function ‘void ObjectSliceRecomputeExtent(ObjectSlice*)’:
layer2/ObjectSlice.cpp:1362:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectSliceState>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1362 |   for(a = 0; a < I->State.size(); a++) {
      |              ~~^~~~~~~~~~~~~~~~~
layer3/Executive.cpp: In function ‘ExecutiveManageObject(PyMOLGlobals*, pymol::CObject*, int, int)’:
layer3/Executive.cpp:14447:37: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 229 [-Wformat-truncation=]
14447 |         " Executive-Warning: name \"%s\" collides with a selection language keyword.\n",
      |                                     ^~
layer0/Feedback.h:274:15: note: ‘snprintf’ output between 73 and 328 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
layer3/Executive.cpp:14442:36: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 230 [-Wformat-truncation=]
14442 |         " Executive: object name \"%s\" is illegal -- renamed to 'all_'.\n", obj->Name
      |                                    ^~
layer0/Feedback.h:274:15: note: ‘snprintf’ output between 61 and 316 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
layer3/Executive.cpp:14473:11: warning: ‘strcpy’ offset 0 is out of the bounds [0, 0] [-Warray-bounds=]
14473 |     strcpy(rec->name, obj->Name);
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~
layer3/Executive.cpp: In function ‘ExecutiveCopy(PyMOLGlobals*, char const*, char const*, int)’:
layer3/Executive.cpp:9665:25: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 236 [-Wformat-truncation=]
 9665 |     " Executive: object %s created.\n", oDst->Name ENDFB(G);
      |                         ^~
layer0/Feedback.h:274:15: note: ‘snprintf’ output between 30 and 285 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
layer2/ObjectSlice.cpp: In member function ‘ObjectSlice::update()’:
layer2/ObjectSlice.cpp:639:42: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 225 [-Wformat-truncation=]
  639 |           "ObjectSliceUpdate-Error: map '%s' has been deleted.\n", oss->MapName
      |                                          ^~
In file included from layer1/Ortho.h:32,
                 from layer1/Scene.h:23,
                 from layer2/ObjectSlice.cpp:34:
layer0/Feedback.h:274:15: note: ‘snprintf’ output between 51 and 306 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
layer2/ObjectSlice.cpp:650:39: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 231 [-Wformat-truncation=]
  650 |             " ObjectSlice: updating \"%s\".\n", I->Name ENDFB(I->G);
      |                                       ^~
layer0/Feedback.h:274:15: note: ‘snprintf’ output between 28 and 283 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
layer3/Executive.cpp: In function ‘ExecutiveSpectrum(PyMOLGlobals*, pymol::zstring_view, pymol::zstring_view, float, float, int, int, pymol::zstring_view, int, int, int)’:
layer3/Executive.cpp:4764:24: warning: ‘strncpy’ specified bound 8 equals destination size [-Wstringop-truncation]
 4764 |                 strncpy(value_s, raw_ptr, sizeof(value_e));
      |                 ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer5/PyMOL.cpp: In function ‘PyMOLreturn_status Loader(CPyMOL*, const char*, const char*, int, const char*, const char*, int, int, int, int, int, int)’:
layer5/PyMOL.cpp:1546:27: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘long unsigned int’ [-Wsign-compare]
 1546 |         if((stop - start) >= sizeof(WordType))
      |            ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
In file included from layer5/PyMOL.cpp:23:
layer5/PyMOL.cpp: In function ‘void PyMOL_Stop(CPyMOL*)’:
layer0/MemoryDebug.h:86:32: warning: deleting object of polymorphic class type ‘CMovie’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
   86 | #define DeleteP(ptr) {if(ptr) {delete ptr;ptr=NULL;}}
layer5/PyMOL.cpp:1987:3: note: in expansion of macro ‘DeleteP’
 1987 |   DeleteP(G->Movie);
      |   ^~~~~~~
layer3/Executive.cpp: In member function ‘CExecutive::drag(int, int, int)’:
layer3/Executive.cpp:15471:55: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 1013 [-Wformat-overflow=]
15471 |                   sprintf(I->ReorderLog, "cmd.order(\"%s\",location=\"%s\")\n",
      |                                                       ^~
15472 |                           order_input, (location == -2) ? "upper" : "current");
      |                           ~~~~~~~~~~~                  
layer3/Executive.cpp:15471:26: note: ‘sprintf’ output between 32 and 1057 bytes into a destination of size 1024
15471 |                   sprintf(I->ReorderLog, "cmd.order(\"%s\",location=\"%s\")\n",
      |                   ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
15472 |                           order_input, (location == -2) ? "upper" : "current");
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer2/ObjectSurface.cpp: In function ‘PyObject* ObjectSurfaceAllStatesAsPyList(ObjectSurface*)’:
layer2/ObjectSurface.cpp:83:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectSurfaceState>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   83 |   for(int a = 0; a < I->State.size(); a++) {
      |                  ~~^~~~~~~~~~~~~~~~~
layer2/ObjectSurface.cpp: In function ‘void ObjectSurfaceDump(ObjectSurface*, const char*, int, int)’:
layer2/ObjectSurface.cpp:236:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectSurfaceState>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  236 |     if(state < I->State.size()) {
      |        ~~~~~~^~~~~~~~~~~~~~~~~
layer2/ObjectSurface.cpp: In member function ‘virtual void ObjectSurface::invalidate(cRep_t, cRepInv_t, int)’:
layer2/ObjectSurface.cpp:281:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectSurfaceState>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  281 |     for(int a = 0; a < I->State.size(); a++) {
      |                    ~~^~~~~~~~~~~~~~~~~
layer2/ObjectSurface.cpp: In function ‘int ObjectSurfaceInvalidateMapName(ObjectSurface*, const char*, const char*)’:
layer2/ObjectSurface.cpp:311:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectSurfaceState>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  311 |   for(int a = 0; a < I->State.size(); a++) {
      |                  ~~^~~~~~~~~~~~~~~~~
layer2/ObjectSurface.cpp: In function ‘ObjectSurface* ObjectSurfaceFromBox(PyMOLGlobals*, ObjectSurface*, ObjectMap*, int, int, float*, float*, float, cIsosurfaceMode, float, pymol::vla<float>&&, cIsosurfaceSide, int)’:
layer2/ObjectSurface.cpp:1029:22: warning: comparison of integer expressions of different signedness: ‘std::vector<ObjectSurfaceState>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
 1029 |   if(I->State.size() <= state) {
      |      ~~~~~~~~~~~~~~~~^~~~~~~~
layer2/ObjectSurface.cpp: In function ‘int ObjectSurfaceSetLevel(ObjectSurface*, float, int, int)’:
layer2/ObjectSurface.cpp:1125:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectSurfaceState>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1125 |     for(int a = 0; a < I->State.size(); a++) {
      |                    ~~^~~~~~~~~~~~~~~~~
layer3/Executive.cpp: In function ‘ExecutiveGroup(PyMOLGlobals*, pymol::zstring_view, pymol::zstring_view, int, int)’:
layer3/Executive.cpp:2259:40: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 235 [-Wformat-truncation=]
 2259 |                   " Executive: adding '%s' to group '%s'.\n", rec.name, rec.group_name
      |                                        ^~
layer0/Feedback.h:274:15: note: ‘snprintf’ output between 36 and 546 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
layer3/Executive.cpp: In function ‘ExecutiveSetName(PyMOLGlobals*, pymol::zstring_view, pymol::zstring_view, bool)’:
layer3/Executive.cpp:3523:41: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 222 [-Wformat-truncation=]
 3523 |       " Warning: Invalid characters in '%s' have been replaced or stripped\n",
      |                                         ^~
 3524 |       name ENDFB(G);
      |       ~~~~                               
layer0/Feedback.h:274:15: note: ‘snprintf’ output between 67 and 322 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
layer3/Executive.cpp: In function ‘ExecutiveSetSession(PyMOLGlobals*, _object*, int, int)’:
layer3/Executive.cpp:5070:57: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 213 [-Wformat-truncation=]
 5070 |             " Executive: skipping unrecognized object \"%s\" of type %d.\n",
      |                                                         ^~
In function ‘ExecutiveSetNamedEntries(PyMOLGlobals*, _object*, int, int, int)’,
    inlined from ‘ExecutiveSetSession(PyMOLGlobals*, _object*, int, int)’ at layer3/Executive.cpp:5696:38:
layer0/Feedback.h:274:15: note: ‘snprintf’ output between 56 and 321 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
layer3/Executive.cpp: In function ‘ExecutiveSetSession(PyMOLGlobals*, _object*, int, int)’:
layer3/Executive.cpp:5095:58: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 210 [-Wformat-truncation=]
 5095 |           "ExectiveSetNamedEntries-Error: after object \"%s\".\n", rec->name ENDFB(G);
      |                                                          ^~
In function ‘ExecutiveSetNamedEntries(PyMOLGlobals*, _object*, int, int, int)’,
    inlined from ‘ExecutiveSetSession(PyMOLGlobals*, _object*, int, int)’ at layer3/Executive.cpp:5696:38:
layer0/Feedback.h:274:15: note: ‘snprintf’ output between 49 and 304 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
layer2/ObjectSurface.cpp: In function ‘ObjectSurfaceDump(ObjectSurface*, char const*, int, int)’:
layer2/ObjectSurface.cpp:268:30: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 235 [-Wformat-truncation=]
  268 |         " ObjectSurfaceDump: %s written to %s\n", I->Name, fname ENDFB(I->G);
      |                              ^~
In file included from layer1/Ortho.h:32,
                 from layer1/Scene.h:23,
                 from layer2/ObjectSurface.cpp:35:
layer0/Feedback.h:274:15: note: ‘snprintf’ output 34 or more bytes (assuming 289) into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
layer2/ObjectSurface.cpp: In member function ‘ObjectSurface::update()’:
layer2/ObjectSurface.cpp:493:43: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 229 [-Wformat-truncation=]
  493 |               " ObjectSurface: updating \"%s\".\n", I->Name ENDFB(I->G);
      |                                           ^~
layer0/Feedback.h:274:15: note: ‘snprintf’ output between 30 and 285 bytes into a destination of size 255
  274 |     (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT,
      |               ^
layer2/ObjectVolume.cpp: In function ‘PyObject* ObjectVolumeAllStatesAsPyList(ObjectVolume*)’:
layer2/ObjectVolume.cpp:127:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectVolumeState>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  127 |   for(int a = 0; a < I->State.size(); a++) {
      |                  ~~^~~~~~~~~~~~~~~~~
layer2/ObjectVolume.cpp: In function ‘int ObjectVolumeAllStatesFromPyList(ObjectVolume*, PyObject*)’:
layer2/ObjectVolume.cpp:248:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectVolumeState>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  248 |     for(int a = 0; a < I->State.size(); a++) {
      |                    ~~^~~~~~~~~~~~~~~~~
layer2/ObjectVolume.cpp: In function ‘int ObjectVolumeInvalidateMapName(ObjectVolume*, const char*, const char*)’:
layer2/ObjectVolume.cpp:313:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectVolumeState>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  313 |   for(int a = 0; a < I->State.size(); a++) {
      |                  ~~^~~~~~~~~~~~~~~~~
layer2/ObjectVolume.cpp: In member function ‘virtual void ObjectVolume::invalidate(cRep_t, cRepInv_t, int)’:
layer2/ObjectVolume.cpp:341:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectVolumeState>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  341 |     for(a = 0; a < I->State.size(); a++) {
      |                ~~^~~~~~~~~~~~~~~~~
layer2/ObjectVolume.cpp: In member function ‘virtual void ObjectVolume::update()’:
layer2/ObjectVolume.cpp:402:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectVolumeState>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  402 |   for(int a = 0; a < I->State.size(); a++) {
      |                  ~~^~~~~~~~~~~~~~~~~
layer2/ObjectVolume.cpp:440:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<float>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  440 |         for (i = 0; i < vs->Ramp.size(); i += 5) {
      |                     ~~^~~~~~~~~~~~~~~~~
layer2/ObjectVolume.cpp: In member function ‘virtual void ObjectVolume::render(RenderInfo*)’:
layer2/ObjectVolume.cpp:759:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectVolumeState>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  759 |   for(a = 0; a < I->State.size(); ++a) {
      |              ~~^~~~~~~~~~~~~~~~~
layer2/ObjectVolume.cpp: In function ‘ObjectVolume* ObjectVolumeFromXtalSym(PyMOLGlobals*, ObjectVolume*, ObjectMap*, CSymmetry*, int, int, float*, float*, float, int, float, float*, int)’:
layer2/ObjectVolume.cpp:1131:22: warning: comparison of integer expressions of different signedness: ‘std::vector<ObjectVolumeState>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
 1131 |   if(I->State.size() <= state) {
      |      ~~~~~~~~~~~~~~~~^~~~~~~~
layer2/ObjectVolume.cpp: In function ‘void ObjectVolumeRecomputeExtent(ObjectVolume*)’:
layer2/ObjectVolume.cpp:1232:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectVolumeState>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1232 |   for(int a = 0; a < I->State.size(); a++) {
      |                  ~~^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/14/cassert:44,
                 from layer0/Field.h:24,
                 from layer0/Isosurf.h:24,
                 from layer2/ObjectMap.h:25,
                 from layer2/ObjectVolume.h:20,
                 from layer2/ObjectVolume.cpp:29:
layer0/Field.h: In instantiation of ‘T* CField::ptr(SizeTs ...) [with T = unsigned char; SizeTs = {int, int, int}]’:
layer0/Field.h:114:19:   required from ‘T& CField::get(SizeTs ...) [with T = unsigned char; SizeTs = {int, int, int}]’
  114 |     return *ptr<T>(pos...);
      |             ~~~~~~^~~~~~~~
layer2/ObjectVolume.cpp:534:44:   required from here
  534 |                 vs->carvemask->get<GLubyte>(x, y, z) = flag ? 0x0 : 0xFF;
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
layer0/Field.h:100:27: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare]
  100 |     assert(sizeof...(pos) <= n_dim());
      |            ~~~~~~~~~~~~~~~^~~~~~~~~~
layer2/ObjectVolume.cpp: At global scope:
layer2/ObjectVolume.cpp:657:15: warning: ‘size_t createPreintegrationTexture(PyMOLGlobals*, const float*, int)’ defined but not used [-Wunused-function]
  657 | static size_t createPreintegrationTexture(PyMOLGlobals * G, const float *Table, const int count)
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~
ov/src/OVContext.cpp: In function ‘void OVContext_Del(OVContext*)’:
ov/src/OVContext.cpp:21:13: warning: variable ‘heap’ set but not used [-Wunused-but-set-variable]
   21 |     OVHeap *heap = I->heap;
      |             ^~~~
layer2/ObjectVolume.cpp: In function ‘ObjectVolumeStateGetMapState(ObjectVolumeState*)’:
layer2/ObjectVolume.cpp:74:33: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 230 [-Wformat-truncation=]
   74 |       "ObjectVolume-Error: map '%s' has been deleted.\n", vs->MapName
      |                                 ^~
In file included from /usr/include/stdio.h:970,
                 from /usr/include/python3.13/Python.h:37,
                 from layer0/os_python.h:34,
                 from layer2/ObjectVolume.cpp:20:
In function ‘snprintf’,
    inlined from ‘ObjectVolumeStateGetMapState(ObjectVolumeState*)’ at layer2/ObjectVolume.cpp:73:5:
/usr/include/bits/stdio2.h:68:35: note: ‘__snprintf_chk’ output between 46 and 301 bytes into a destination of size 255
   68 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   69 |                                    __glibc_objsize (__s), __fmt,
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   70 |                                    __va_arg_pack ());
      |                                    ~~~~~~~~~~~~~~~~~
layer3/ExecutivePython.cpp: In function ‘pymol::Result<> ExecutiveSetRawAlignment(PyMOLGlobals*, pymol::zstring_view, PyObject*, pymol::zstring_view, int, int)’:
layer3/ExecutivePython.cpp:171:23: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare]
  171 |   for(size_t c = 0; c < n_cols; ++c) {
      |                     ~~^~~~~~~~
layer3/ExecutivePython.cpp:180:25: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare]
  180 |     for(size_t i = 0; i < n_idx; ++i) {
      |                       ~~^~~~~~~
In file included from layer2/AtomInfo.h:23,
                 from layer3/MaeExportHelpers.h:11,
                 from layer3/MaeExportHelpers.cpp:11:
In function ‘SettingUniqueGetTypedValuePtr(PyMOLGlobals*, int, int, int, bool*)’,
    inlined from ‘SettingUniqueGetIfDefined<bool>(PyMOLGlobals*, int, int, bool*)bool’ at layer1/Setting.h:447:39,
    inlined from ‘AtomSettingGetIfDefined<bool, AtomInfoType const>(PyMOLGlobals*, AtomInfoType const*, int, bool*)bool’ at layer2/AtomInfo.h:496:33,
    inlined from ‘AtomSettingGetWD<bool, AtomInfoType const>(PyMOLGlobals*, AtomInfoType const*, int, bool)bool’ at layer2/AtomInfo.h:506:36,
    inlined from ‘SettingGet<bool>(PyMOLGlobals*, SeleCoordIterator const&, int)bool’ at layer3/MaeExportHelpers.cpp:24:26,
    inlined from ‘MaeExportGetAtomStyle(PyMOLGlobals*, SeleCoordIterator const&)’ at layer3/MaeExportHelpers.cpp:73:26:
layer1/Setting.h:436:11: warning: ‘out’ may be used uninitialized [-Wmaybe-uninitialized]
  436 |   int i = *out;
      |           ^~~~
layer2/AtomInfo.h: In function ‘MaeExportGetAtomStyle(PyMOLGlobals*, SeleCoordIterator const&)’:
layer2/AtomInfo.h:505:5: note: ‘out’ was declared here
  505 |   V out;
      |     ^~~
layer2/RepCartoon.cpp: In function ‘Rep* RepCartoonNew(CoordSet*, int)’:
layer2/RepCartoon.cpp:3731:11: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class CCInOut’; use assignment or value-initialization instead [-Wclass-memaccess]
 3731 |     memset(car,      0, sizeof(*car)      * nAtIndex);
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer2/RepCartoon.cpp:44:7: note: ‘class CCInOut’ declared here
   44 | class CCInOut {
      |       ^~~~~~~
In file included from layer2/CoordSet.h:24,
                 from layer2/RepCartoon.h:21,
                 from layer2/RepCartoon.cpp:27:
In function ‘SettingUniqueGetTypedValuePtr(PyMOLGlobals*, int, int, int, bool*)’,
    inlined from ‘SettingUniqueGetIfDefined<bool>(PyMOLGlobals*, int, int, bool*)bool’ at layer1/Setting.h:447:39,
    inlined from ‘AtomSettingGetIfDefined<bool, AtomInfoType const>(PyMOLGlobals*, AtomInfoType const*, int, bool*)bool’ at layer2/AtomInfo.h:496:33,
    inlined from ‘AtomSettingGetWD<bool, AtomInfoType const>(PyMOLGlobals*, AtomInfoType const*, int, bool)bool’ at layer2/AtomInfo.h:506:36,
    inlined from ‘ring_connector_visible(PyMOLGlobals*, AtomInfoType const*, AtomInfoType const*, bool)’ at layer2/RepCartoon.cpp:337:23:
layer1/Setting.h:436:11: warning: ‘out’ may be used uninitialized [-Wmaybe-uninitialized]
  436 |   int i = *out;
      |           ^~~~
In file included from layer2/ObjectMolecule.h:25,
                 from layer2/CoordSet.h:25:
layer2/AtomInfo.h: In function ‘ring_connector_visible(PyMOLGlobals*, AtomInfoType const*, AtomInfoType const*, bool)’:
layer2/AtomInfo.h:505:5: note: ‘out’ was declared here
  505 |   V out;
      |     ^~~
In function ‘SettingUniqueGetTypedValuePtr(PyMOLGlobals*, int, int, int, bool*)’,
    inlined from ‘SettingUniqueGetIfDefined<bool>(PyMOLGlobals*, int, int, bool*)bool’ at layer1/Setting.h:447:39,
    inlined from ‘AtomSettingGetIfDefined<bool, AtomInfoType const>(PyMOLGlobals*, AtomInfoType const*, int, bool*)bool’ at layer2/AtomInfo.h:496:33,
    inlined from ‘AtomSettingGetWD<bool, AtomInfoType const>(PyMOLGlobals*, AtomInfoType const*, int, bool)bool’ at layer2/AtomInfo.h:506:36,
    inlined from ‘ring_connector_visible(PyMOLGlobals*, AtomInfoType const*, AtomInfoType const*, bool)’ at layer2/RepCartoon.cpp:338:23:
layer1/Setting.h:436:11: warning: ‘out’ may be used uninitialized [-Wmaybe-uninitialized]
  436 |   int i = *out;
      |           ^~~~
layer2/AtomInfo.h: In function ‘ring_connector_visible(PyMOLGlobals*, AtomInfoType const*, AtomInfoType const*, bool)’:
layer2/AtomInfo.h:505:5: note: ‘out’ was declared here
  505 |   V out;
      |     ^~~
layer2/RepCartoon.cpp: In function ‘do_ring(PyMOLGlobals*, nuc_acid_data*, int, int*, ObjectMolecule*, CoordSet*, float, CGO*, int, float, int, int, int, float, float, int*, float*, float)’:
layer2/RepCartoon.cpp:1007:65: warning: ‘i’ may be used uninitialized [-Wmaybe-uninitialized]
 1007 |                     float ladder_alpha = 1.0f - AtomSettingGetWD(G, ai_i[i], cSetting_cartoon_transparency, 1.0f - alpha);
      |                                                 ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer2/RepCartoon.cpp:461:11: note: ‘i’ was declared here
  461 |       int i;
      |           ^
layer2/RepCartoon.cpp: In function ‘RepCartoonNew(CoordSet*, int)’:
layer2/RepCartoon.cpp:3206:23: warning: ‘MEM[(float *)&t2]’ may be used uninitialized [-Wmaybe-uninitialized]
 3206 |   float t0[3], t1[3], t2[3];
      |                       ^~
layer2/RepCartoon.cpp:3206:23: warning: ‘MEM[(float *)&t2 + 4B]’ may be used uninitialized [-Wmaybe-uninitialized]
layer3/PlugIOManager.cpp: In function ‘ObjectMap* PlugIOManagerLoadVol(PyMOLGlobals*, ObjectMap*, const char*, int, int, const char*)’:
layer3/PlugIOManager.cpp:416:34: warning: comparison of integer expressions of different signedness: ‘std::vector<ObjectMapState>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  416 |             if(obj->State.size() <= state) {
      |                ~~~~~~~~~~~~~~~~~~^~~~~~~~
In file included from /usr/include/c++/14/cassert:44,
                 from layer0/Field.h:24,
                 from layer0/Isosurf.h:24,
                 from layer2/ObjectMap.h:25,
                 from layer3/PlugIOManager.h:23,
                 from layer3/PlugIOManager.cpp:24:
layer0/Field.h: In instantiation of ‘T* CField::ptr(SizeTs ...) [with T = float; SizeTs = {int, int, int}]’:
layer0/Field.h:114:19:   required from ‘T& CField::get(SizeTs ...) [with T = float; SizeTs = {int, int, int}]’
  114 |     return *ptr<T>(pos...);
      |             ~~~~~~^~~~~~~~
layer3/PlugIOManager.cpp:541:21:   required from here
  156 | #define Ffloat3(f, a, b, c) ((f)->get<float>(a, b, c))
      |                              ~~~~~~~~~~~~~~~^~~~~~~~~
layer0/Field.h:100:27: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare]
  100 |     assert(sizeof...(pos) <= n_dim());
      |            ~~~~~~~~~~~~~~~^~~~~~~~~~
layer3/PlugIOManager.cpp: In function ‘PlugIOManagerLoad’:
layer3/PlugIOManager.cpp:946:65: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 200 [-Wformat-truncation=]
  946 |         " PlugIOManagerLoad: can't load trajectory into object '%s'\n", obj->Name ENDFB(G);
      |                                                                 ^~
In file included from /usr/include/stdio.h:970,
                 from /usr/include/python3.13/Python.h:37,
                 from layer0/os_python.h:34,
                 from layer3/PlugIOManager.cpp:20:
In function ‘snprintf’,
    inlined from ‘PlugIOManagerLoad’ at layer3/PlugIOManager.cpp:945:7:
/usr/include/bits/stdio2.h:68:35: note: ‘__snprintf_chk’ output between 58 and 313 bytes into a destination of size 255
   68 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   69 |                                    __glibc_objsize (__s), __fmt,
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   70 |                                    __va_arg_pack ());
      |                                    ~~~~~~~~~~~~~~~~~
layer3/RingFinder.cpp: In member function ‘void AbstractRingFinder::recursion(int, int)’:
layer3/RingFinder.cpp:23:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   23 |     } else if (depth < m_indices.size() - 1) {
      |                ~~~~~~^~~~~~~~~~~~~~~~~~~~~~
layer3/Seeker.cpp: In function ‘void SeekerRefresh(PyMOLGlobals*, std::vector<CSeqRow>&)’:
layer3/Seeker.cpp:485:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
  485 |   for(int b = 0; b < nRow; b++) {
      |                  ~~^~~~~~
layer3/Seeker.cpp: In function ‘void SeekerUpdate(PyMOLGlobals*)’:
layer3/Seeker.cpp:1150:23: warning: comparison of integer expressions of different signedness: ‘ov_size’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
 1150 |           if(row->len < min_pad) {
      |              ~~~~~~~~~^~~~~~~~~
layer3/Seeker.cpp:1186:23: warning: comparison of integer expressions of different signedness: ‘ov_size’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
 1186 |           if(row->len < min_pad) {
      |              ~~~~~~~~~^~~~~~~~~
layer3/Seeker.cpp: In lambda function:
layer3/Seeker.cpp:1248:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
 1248 |             for(int i = 0; i < str_size; i++){
      |                            ~~^~~~~~~~~~
layer3/Seeker.cpp: In function ‘void SeekerUpdate(PyMOLGlobals*)’:
layer3/Seeker.cpp:1930:27: warning: comparison of integer expressions of different signedness: ‘ov_size’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
 1930 |           if(row->ext_len < stop)
      |              ~~~~~~~~~~~~~^~~~~~
In file included from layer0/vla.h:7,
                 from layer1/Symmetry.h:26,
                 from layer1/PyMOLObject.h:27,
                 from layer1/Seq.h:21,
                 from layer3/Seeker.cpp:26:
layer3/Seeker.cpp: In function ‘void SeekerFree(PyMOLGlobals*)’:
layer0/MemoryDebug.h:86:32: warning: deleting object of polymorphic class type ‘CSeeker’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
   86 | #define DeleteP(ptr) {if(ptr) {delete ptr;ptr=NULL;}}
layer3/Seeker.cpp:1964:3: note: in expansion of macro ‘DeleteP’
 1964 |   DeleteP(G->Seeker);
      |   ^~~~~~~
layer3/Selector.cpp: In member function ‘virtual bool SelectorAtomIterator::next()’:
layer3/Selector.cpp:185:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  185 |   if ((++a) >= selector->Table.size())
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Selector.cpp: In function ‘bool SelectorIsSelectionDiscrete(PyMOLGlobals*, SelectorID_t, bool)’:
layer3/Selector.cpp:1028:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1028 |   for(int a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                             ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp: In function ‘int SelectorClassifyAtoms(PyMOLGlobals*, int, int, ObjectMolecule*)’:
layer3/Selector.cpp:1082:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1082 |   while(a < I->Table.size()) {
      |         ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:1106:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1106 |       while(a1 < I->Table.size()) {
      |             ~~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp: In function ‘const char* SelectorGetNameFromIndex(PyMOLGlobals*, SelectorID_t)’:
layer3/Selector.cpp:1519:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<SelectionInfoRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1519 |   for(int a = 1; a < I->Info.size(); a++) {
      |                  ~~^~~~~~~~~~~~~~~~
layer3/Selector.cpp: In function ‘int SelectorAssignSS(PyMOLGlobals*, int, int, int, int, ObjectMolecule*, int)’:
layer3/Selector.cpp:1653:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1653 |       for(a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                             ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:1680:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1680 |             while(a1 < I->Table.size()) {
      |                   ~~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:1874:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1874 |         for(a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                               ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp: In function ‘PyObject* SelectorColorectionGet(PyMOLGlobals*, const char*)’:
layer3/Selector.cpp:2687:18: warning: comparison of integer expressions of different signedness: ‘ov_size’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
 2687 |     for(b = 0; b < n_used; b++) {
      |                ~~^~~~~~~~
layer3/Selector.cpp:2703:16: warning: comparison of integer expressions of different signedness: ‘ov_size’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
 2703 |   for(a = 0; a < n_used; a++) {
      |              ~~^~~~~~~~
layer3/Selector.cpp:2715:18: warning: comparison of integer expressions of different signedness: ‘ov_size’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
 2715 |     for(b = 0; b < n_used; b++) {
      |                ~~^~~~~~~~
layer3/Selector.cpp: In function ‘int SelectorColorectionApply(PyMOLGlobals*, PyObject*, const char*)’:
layer3/Selector.cpp:2763:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘ov_size’ {aka ‘long unsigned int’} [-Wsign-compare]
 2763 |     for(b = 0; b < n_used; b++) {       /* update selection indices */
      |                ~~^~~~~~~~
layer3/Selector.cpp:2768:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 2768 |     for(a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                           ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:2772:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘ov_size’ {aka ‘long unsigned int’} [-Wsign-compare]
 2772 |       for(b = 0; b < n_used; b++) {
      |                  ~~^~~~~~~~
layer3/Selector.cpp: In function ‘PyObject* SelectorSecretsAsPyList(PyMOLGlobals*)’:
layer3/Selector.cpp:2873:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<SelectionInfoRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 2873 |   for(int a = 0; a < I->Info.size(); a++) {
      |                  ~~^~~~~~~~~~~~~~~~
layer3/Selector.cpp: In function ‘PyObject* SelectorAsPyList(PyMOLGlobals*, SelectorID_t)’:
layer3/Selector.cpp:2952:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 2952 |   for(a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                         ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp: In function ‘int SelectorCountStates(PyMOLGlobals*, int)’:
layer3/Selector.cpp:3446:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 3446 |   for(a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                         ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp: In function ‘int SelectorCheckIntersection(PyMOLGlobals*, int, int)’:
layer3/Selector.cpp:3470:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 3470 |   for(int a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                             ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp: In function ‘int SelectorCountAtoms(PyMOLGlobals*, int, int)’:
layer3/Selector.cpp:3488:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 3488 |   for(int a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                             ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp: In function ‘void SelectorSetDeleteFlagOnSelectionInObject(PyMOLGlobals*, int, ObjectMolecule*, signed char)’:
layer3/Selector.cpp:3503:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 3503 |   for(int a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                             ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp: In function ‘int* SelectorGetIndexVLAImpl(PyMOLGlobals*, CSelector*, SelectorID_t)’:
layer3/Selector.cpp:3589:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 3589 |   for(a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                         ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp: In function ‘void SelectorLogSele(PyMOLGlobals*, const char*)’:
layer3/Selector.cpp:3648:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 3648 |       for(a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                             ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp: In function ‘ObjectMolecule* SelectorGetSingleObjectMolecule(PyMOLGlobals*, SelectorID_t)’:
layer3/Selector.cpp:3813:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 3813 |   for (a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                          ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp: In function ‘ObjectMolecule* SelectorGetFirstObjectMolecule(PyMOLGlobals*, SelectorID_t)’:
layer3/Selector.cpp:3843:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 3843 |   for (a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                          ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp: In function ‘ObjectMolecule** SelectorGetObjectMoleculeVLA(PyMOLGlobals*, SelectorID_t)’:
layer3/Selector.cpp:3867:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 3867 |   for(a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                         ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp: In function ‘int SelectorSubdivide(PyMOLGlobals*, const char*, SelectorID_t, SelectorID_t, SelectorID_t, SelectorID_t, const char*, const char*, int*)’:
layer3/Selector.cpp:4266:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 4266 |       for(a = 0; a < I->Table.size(); a++)
      |                  ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp: In function ‘int SelectorGetSeleNCSet(PyMOLGlobals*, SelectorID_t)’:
layer3/Selector.cpp:4570:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 4570 |     for(a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                           ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp: In function ‘int SelectorGetArrayNCSet(PyMOLGlobals*, const sele_array_t&, int)’:
layer3/Selector.cpp:4600:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 4600 |   for(a = start; a < I->Table.size(); a++) {
      |                  ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp: In function ‘int SelectorMapMaskVDW(PyMOLGlobals*, int, ObjectMapState*, float, int)’:
layer3/Selector.cpp:4761:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 4761 |   for(a = 0; a < I->Table.size(); a++) {
      |              ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp: In function ‘int SelectorMapGaussian(PyMOLGlobals*, int, ObjectMapState*, float, int, int, int, int, float)’:
layer3/Selector.cpp:5121:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 5121 |   for(a = 0; a < I->Table.size(); a++) {
      |              ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:5165:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 5165 |   for(a = 0; a < I->Table.size(); a++) {
      |              ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp: In function ‘int SelectorMapCoulomb(PyMOLGlobals*, int, ObjectMapState*, float, int, int, int, float)’:
layer3/Selector.cpp:5373:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 5373 |   for(a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                         ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp: In function ‘int SelectorCreateObjectMolecule(PyMOLGlobals*, SelectorID_t, const char*, int, int, int, int, int, int, int)’:
layer3/Selector.cpp:6062:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
 6062 |   if(ob)
      |   ^~
layer3/Selector.cpp:6066:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
 6066 |     SelectorUpdateTable(G, source, -1);
      |     ^~~~~~~~~~~~~~~~~~~
layer3/Selector.cpp:6077:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 6077 |       for(a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                             ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp: In lambda function:
layer3/Selector.cpp:6103:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 6103 |   for(a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                         ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:6133:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectMolecule*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 6133 |   for(a = cNDummyModels; a < I->Obj.size(); a++) {  /* find bonds wholly contained in the selection */
      |                          ~~^~~~~~~~~~~~~~~
layer3/Selector.cpp:6159:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 6159 |     for(a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                           ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:6200:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 6200 |     for(a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                           ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:6224:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 6224 |       for(a = cNDummyAtoms; a < I->Table.size(); a++)  /* any selected atoms in this state? */
      |                             ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp: In function ‘int SelectorEmbedSelection(PyMOLGlobals*, const int*, pymol::zstring_view, ObjectMolecule*, int, int)’:
layer3/Selector.cpp:6660:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 6660 |   for(a = start; a < I->Table.size(); a++) {
      |                  ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp: In function ‘sele_array_t SelectorSelectFromTagDict(PyMOLGlobals*, const std::unordered_map<int, int>&)’:
layer3/Selector.cpp:6755:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 6755 |       for(int a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                                 ~~^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/14/cassert:44,
                 from layer0/Field.h:24,
                 from layer0/Isosurf.h:24,
                 from layer2/ObjectMap.h:25,
                 from layer3/Selector.h:27,
                 from layer3/Selector.cpp:39:
layer3/Selector.cpp: In function ‘void SelectorUpdateTableSingleObject(PyMOLGlobals*, ObjectMolecule*, int, bool)’:
layer3/Selector.cpp:6997:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 6997 |   assert(c == I->Table.size());
      |          ~~^~~~~~~~~~~~~~~~~~
layer3/Selector.cpp: In function ‘sele_array_t SelectorGetSeleArrayForAtomIndices(CSelector*, ObjectMolecule*, const int*, int, bool)’:
layer3/Selector.cpp:7010:26: warning: comparison of integer expressions of different signedness: ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
 7010 |   assert(I->Table.size() == cNDummyAtoms + obj->NAtom);
      |          ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
layer3/Selector.cpp: In function ‘int SelectorModulate1(PyMOLGlobals*, EvalElem*, int)’:
layer3/Selector.cpp:7293:36: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 7293 |           for (a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                                  ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:7316:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 7316 |                   for(a = 0; ok && a < I->Table.size(); a++) {
      |                                    ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:7379:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 7379 |       for(a = 0; a < I->Table.size(); a++) {
      |                  ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:7393:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 7393 |           for(a = 0; a < I->Table.size(); a++) {
      |                      ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:7416:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 7416 |                   for(a = 0; ok && a < I->Table.size(); a++) {
      |                                    ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:7457:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 7457 |     for(a = cNDummyAtoms; a < I->Table.size(); a++)
      |                           ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp: In function ‘int SelectorSelect0(PyMOLGlobals*, EvalElem*)’:
layer3/Selector.cpp:7490:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 7490 |       for(a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                             ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:7501:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 7501 |       for(a = cNDummyAtoms; a < I->Table.size(); a++)
      |                             ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:7506:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 7506 |       for(a = cNDummyAtoms; a < I->Table.size(); a++)
      |                             ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:7513:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 7513 |     for(a = cNDummyAtoms; a < I->Table.size(); a++)
      |                           ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:7517:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 7517 |     for(a = cNDummyAtoms; a < I->Table.size(); a++)
      |                           ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:7521:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 7521 |     for(a = cNDummyAtoms; a < I->Table.size(); a++)
      |                           ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:7525:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 7525 |     for(a = cNDummyAtoms; a < I->Table.size(); a++)
      |                           ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:7529:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 7529 |     for(a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                           ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:7538:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 7538 |       for(a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                             ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:7555:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 7555 |     for(a = cNDummyAtoms; a < I->Table.size(); a++)
      |                           ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:7560:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 7560 |     for(a = cNDummyAtoms; a < I->Table.size(); a++)
      |                           ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:7565:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 7565 |     for(a = cNDummyAtoms; a < I->Table.size(); a++)
      |                           ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:7570:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 7570 |     for(a = cNDummyAtoms; a < I->Table.size(); a++)
      |                           ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:7575:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 7575 |     for(a = cNDummyAtoms; a < I->Table.size(); a++)
      |                           ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:7580:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 7580 |     for(a = cNDummyAtoms; a < I->Table.size(); a++)
      |                           ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:7585:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 7585 |     for(a = cNDummyAtoms; a < I->Table.size(); a++)
      |                           ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:7589:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 7589 |     for(a = cNDummyAtoms; a < I->Table.size(); a++)
      |                           ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:7593:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 7593 |     for(a = cNDummyAtoms; a < I->Table.size(); a++)
      |                           ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:7598:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 7598 |     for(a = cNDummyAtoms; a < I->Table.size(); a++)
      |                           ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:7603:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 7603 |     for(a = cNDummyAtoms; a < I->Table.size(); a++)
      |                           ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:7610:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 7610 |     for(a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                           ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:7626:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 7626 |     for(a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                           ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:7632:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 7632 |     for(a = 0; a < I->Table.size(); a++) {
      |                ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:7641:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 7641 |     for(a = 0; a < I->Table.size(); a++) {
      |                ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:7653:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 7653 |       for(a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                             ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:7673:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 7673 |     for(a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                           ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp: In function ‘pymol::Result<> SelectorSelect1(PyMOLGlobals*, EvalElem*, int)’:
layer3/Selector.cpp:8378:36: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectMolecule*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 8378 |           for(a = cNDummyModels; a < I->Obj.size(); a++)
      |                                  ~~^~~~~~~~~~~~~~~
layer3/Selector.cpp:8388:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<ObjectMolecule*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 8388 |             else if(model > I->Obj.size())
      |                     ~~~~~~^~~~~~~~~~~~~~~
layer3/Selector.cpp: In function ‘int SelectorSelect2(PyMOLGlobals*, EvalElem*, int)’:
layer3/Selector.cpp:8470:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 8470 |       for(a = cNDummyAtoms; a < I->Table.size(); a++)
      |                             ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:8474:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 8474 |         for(a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                               ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:8522:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 8522 |             for(a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                                   ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:8533:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 8533 |             for(a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                                   ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:8544:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 8544 |             for(a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                                   ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:8555:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 8555 |             for(a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                                   ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:8570:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 8570 |             for(a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                                   ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:8581:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 8581 |             for(a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                                   ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:8592:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 8592 |             for(a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                                   ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:8603:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 8603 |             for(a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                                   ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:8618:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 8618 |             for(a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                                   ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:8629:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 8629 |             for(a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                                   ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:8640:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 8640 |             for(a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                                   ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:8651:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 8651 |             for(a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                                   ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp: In function ‘int SelectorLogic1(PyMOLGlobals*, EvalElem*, int)’:
layer3/Selector.cpp:9128:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 9128 |           for(a = 0; a < I->Table.size(); a++) {
      |                      ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:9157:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 9157 |                   for(a = 0; a < I->Table.size(); a++) {
      |                              ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp: In function ‘int SelectorOperator22(PyMOLGlobals*, EvalElem*, int)’:
layer3/Selector.cpp:9416:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare]
 9416 |           for(a = 0; a < table_size; a++) {
      |                      ~~^~~~~~~~~~~~
layer3/Selector.cpp:9438:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 9438 |                   for(a = 0; a < I->Table.size(); a++) {
      |                              ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:9468:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 9468 |         for(a = 0; a < I->Table.size(); a++) {
      |                    ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:9473:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 9473 |       for(a = cNDummyAtoms; a < I->Table.size(); a++)
      |                             ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp: In function ‘pymol::Result<std::unique_ptr<int [], std::default_delete<int []> > > SelectorEvaluate(PyMOLGlobals*, std::vector<std::__cxx11::basic_string<char> >&, int, int)’:
layer3/Selector.cpp:9622:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 9622 |   while(ok && c < word.size()) {
      |               ~~^~~~~~~~~~~~~
layer3/Selector.cpp: In function ‘DistSet* SelectorGetDistSet(PyMOLGlobals*, DistSet*, int, int, int, int, int, float, float*)’:
layer3/Selector.cpp:10213:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
10213 |     for(a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                           ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp: In function ‘DistSet* SelectorGetAngleSet(PyMOLGlobals*, DistSet*, int, int, int, int, int, int, int, float*, int*)’:
layer3/Selector.cpp:10495:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
10495 |     for(a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                           ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:10519:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
10519 |       for(a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                             ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp: In function ‘DistSet* SelectorGetDihedralSet(PyMOLGlobals*, DistSet*, int, int, int, int, int, int, int, int, int, float*, int*)’:
layer3/Selector.cpp:10724:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
10724 |     for(a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                           ~~^~~~~~~~~~~~~~~~~
layer3/Selector.cpp:10801:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<TableRec>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
10801 |         for(a = cNDummyAtoms; a < I->Table.size(); a++) {
      |                               ~~^~~~~~~~~~~~~~~~~
layer0/Field.h: In instantiation of ‘T* CField::ptr(SizeTs ...) [with T = float; SizeTs = {int, int, int, int}]’:
layer3/Selector.cpp:4800:18:   required from here
  158 | #define Ffloat4p(f, a, b, c, d) ((f)->ptr<float>(a, b, c, d))
      |                                  ~~~~~~~~~~~~~~~^~~~~~~~~~~~
layer0/Field.h:100:27: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare]
  100 |     assert(sizeof...(pos) <= n_dim());
      |            ~~~~~~~~~~~~~~~^~~~~~~~~~
layer0/Field.h: In instantiation of ‘T* CField::ptr(SizeTs ...) [with T = float; SizeTs = {int, int, int}]’:
layer3/Selector.cpp:5309:20:   required from here
  155 | #define Ffloat3p(f, a, b, c) ((f)->ptr<float>(a, b, c))
      |                               ~~~~~~~~~~~~~~~^~~~~~~~~
layer0/Field.h:100:27: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare]
  100 |     assert(sizeof...(pos) <= n_dim());
      |            ~~~~~~~~~~~~~~~^~~~~~~~~~
layer3/Selector.cpp: In function ‘SelectorAssignSS(PyMOLGlobals*, int, int, int, int, ObjectMolecule*, int)’:
layer3/Selector.cpp:1722:70: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 207 [-Wformat-truncation=]
 1722 |                     " AssignSS-Warning: Ignoring incomplete residue /%s/%s/%s/%d%c ...\n",
      |                                                                      ^~
In file included from /usr/include/stdio.h:970,
                 from /usr/include/c++/14/cstdio:42,
                 from /usr/include/c++/14/ext/string_conversions.h:45,
                 from /usr/include/c++/14/bits/basic_string.h:4154,
                 from /usr/include/c++/14/string:54,
                 from layer3/Selector.cpp:20:
In function ‘snprintf’,
    inlined from ‘SelectorAssignSS(PyMOLGlobals*, int, int, int, int, ObjectMolecule*, int)’ at layer3/Selector.cpp:1721:19:
/usr/include/bits/stdio2.h:68:35: note: ‘__snprintf_chk’ output between 59 and 324 bytes into a destination of size 255
   68 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   69 |                                    __glibc_objsize (__s), __fmt,
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   70 |                                    __va_arg_pack ());
      |                                    ~~~~~~~~~~~~~~~~~
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:62:16: warning: type ‘struct parm’ violates the C++ One Definition Rule [-Wodr]
   62 | typedef struct parm {
      |                ^
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:59:16: note: a different type is defined in another translation unit
   59 | typedef struct parm {
      |                ^
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:63:8: note: the first difference of corresponding definitions is field ‘title’
   63 |   char title[85];
      |        ^
contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:60:17: note: a field with different name is defined in another translation unit
   60 |         char    ititl[81];
      |                 ^
contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp:33:3: warning: type ‘struct parmdata’ violates the C++ One Definition Rule [-Wodr]
   33 | } parmdata;
      |   ^
contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp:32:3: note: a different type is defined in another translation unit
   32 | } parmdata;
      |   ^
contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp:28:15: note: the first difference of corresponding definitions is field ‘prm’
   28 |   parmstruct *prm;
      |               ^
contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp:28:13: note: a field with different name is defined in another translation unit
   28 |   ReadPARM *rp;
      |             ^
layer0/Isosurf.cpp:47:16: warning: type ‘struct PointType’ violates the C++ One Definition Rule [-Wodr]
   47 | typedef struct PointType {
      |                ^
layer0/Tetsurf.cpp:46:3: note: a different type is defined in another translation unit
   46 | } PointType;
      |   ^
layer0/Isosurf.cpp:49:7: note: the first difference of corresponding definitions is field ‘NLink’
   49 |   int NLink;
      |       ^
layer0/Tetsurf.cpp:43:9: note: a field with different name is defined in another translation unit
   43 |   float Normal[3];
      |         ^
ov/src/OVOneToAny.cpp:15:3: warning: type ‘struct up_element’ violates the C++ One Definition Rule [-Wodr]
   15 | } up_element;
      |   ^
ov/src/OVOneToOne.cpp:15:3: note: a different type is defined in another translation unit
   15 | } up_element;
      |   ^
ov/src/OVOneToOne.cpp:14:25: note: the first difference of corresponding definitions is field ‘reverse_next’
   14 |   ov_size forward_next, reverse_next;
      |                         ^
ov/src/OVOneToOne.cpp:15:3: note: a type with different number of fields is defined in another translation unit
   15 | } up_element;
      |   ^
In member function ‘set_’,
    inlined from ‘__ct ’ at include/tnt/tnt_array1d.h:119:6,
    inlined from ‘findBest’ at layer0/ccealignmodule.cpp:506:28:
include/tnt/tnt_array1d.h:283:20: warning: ‘__builtin_memset’ specified bound between 18446744056529682432 and 18446744073709551608 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=]
  283 |                 *p = a;
      |                    ^
contrib/uiuc/plugins/molfile_plugin/src/ply_c.h: In function ‘recreate_command_line’:
contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1334:11: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=]
 1334 |   line[0] = '\0';
      |           ^
contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1333:26: note: destination object of size 0 allocated by ‘malloc’
 1333 |   line = (char *) malloc (sizeof(char) * len);
      |                          ^
layer3/Executive.cpp: In function ‘ExecutiveManageObject’:
layer3/Executive.cpp:14473:11: warning: ‘strcpy’ writing between 1 and 256 bytes into a region of size 0 overflows the destination [-Wstringop-overflow=]
14473 |     strcpy(rec->name, obj->Name);
      |           ^
lto1: note: destination object is likely at address zero
contrib/champ/os_memory.c: In function ‘OSMemoryZero’:
contrib/champ/os_memory.c:55:18: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
   55 |   while(count&&(((int)p)&mask)) {
      |                  ^
contrib/champ/os_memory.c: In function ‘OSMemoryHashAdd’:
contrib/champ/os_memory.c:137:8: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
  137 |   hash=(int)rec;
      |        ^
contrib/champ/os_memory.c: In function ‘OSMemoryHashRemove’:
contrib/champ/os_memory.c:150:8: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
  150 |   hash=(int)rec;
      |        ^
Exception ignored in: <function Pool.__del__ at 0x7facbc208220>
Traceback (most recent call last):
  File "/usr/lib64/python3.13/multiprocessing/pool.py", line 271, in __del__
  File "/usr/lib64/python3.13/multiprocessing/queues.py", line 397, in put
  File "/usr/lib64/python3.13/multiprocessing/connection.py", line 200, in send_bytes
  File "/usr/lib64/python3.13/multiprocessing/connection.py", line 416, in _send_bytes
AttributeError: 'NoneType' object has no attribute 'pack'
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.hSBqRx
+ umask 022
+ cd /builddir/build/BUILD/pymol-2.5.0-build
+ '[' /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT '!=' / ']'
+ rm -rf /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT
++ dirname /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT
+ mkdir -p /builddir/build/BUILD/pymol-2.5.0-build
+ mkdir /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd pymol-open-source-2.5.0
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ /usr/bin/python3 setup.py install -O1 --skip-build --root /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT --prefix /usr --use-msgpackc=c++11 --use-openmp=yes --pymol-path=/usr/lib64/python3.13/site-packages/pymol
/usr/lib64/python3.13/site-packages/chempy/sdf.py:23: SyntaxWarning: invalid escape sequence '\s'
/usr/lib64/python3.13/site-packages/chempy/sdf.py:24: SyntaxWarning: invalid escape sequence '\s'
/usr/lib64/python3.13/site-packages/pmg_tk/skins/normal/__init__.py:849: SyntaxWarning: invalid escape sequence '\.'
/usr/lib64/python3.13/site-packages/pmg_tk/skins/normal/__init__.py:889: SyntaxWarning: invalid escape sequence '\.'
/usr/lib64/python3.13/site-packages/pymol/plugins/installation.py:23: SyntaxWarning: invalid escape sequence '\p'
/usr/lib64/python3.13/site-packages/pymol/wizard/pseudoatom.py:13: SyntaxWarning: invalid escape sequence '\8'
/usr/lib64/python3.13/site-packages/pymol/internal.py:252: SyntaxWarning: invalid escape sequence '\.'
/usr/lib64/python3.13/site-packages/pymol/internal.py:253: SyntaxWarning: invalid escape sequence '\.'
/usr/lib64/python3.13/site-packages/pymol/internal.py:254: SyntaxWarning: invalid escape sequence '\.'
/usr/lib64/python3.13/site-packages/pymol/internal.py:257: SyntaxWarning: invalid escape sequence '\.'
/usr/lib64/python3.13/site-packages/pymol/movie.py:818: SyntaxWarning: invalid escape sequence '\W'
/usr/lib64/python3.13/site-packages/pymol/moving.py:733: SyntaxWarning: invalid escape sequence '\s'
/usr/lib64/python3.13/site-packages/pymol/parser.py:48: SyntaxWarning: invalid escape sequence '\['
/usr/lib64/python3.13/site-packages/pymol/parser.py:408: SyntaxWarning: invalid escape sequence '\.'
/usr/lib64/python3.13/site-packages/pymol/viewing.py:899: SyntaxWarning: invalid escape sequence '\.'
/usr/lib64/python3.13/site-packages/pymol/viewing.py:912: SyntaxWarning: invalid escape sequence '\.'
/usr/lib64/python3.13/site-packages/pymol/viewing.py:914: SyntaxWarning: invalid escape sequence '\.'
/usr/lib64/python3.13/site-packages/chempy/sdf.py:23: SyntaxWarning: invalid escape sequence '\s'
/usr/lib64/python3.13/site-packages/chempy/sdf.py:24: SyntaxWarning: invalid escape sequence '\s'
/usr/lib64/python3.13/site-packages/pmg_tk/skins/normal/__init__.py:849: SyntaxWarning: invalid escape sequence '\.'
/usr/lib64/python3.13/site-packages/pmg_tk/skins/normal/__init__.py:889: SyntaxWarning: invalid escape sequence '\.'
/usr/lib64/python3.13/site-packages/pymol/plugins/installation.py:23: SyntaxWarning: invalid escape sequence '\p'
/usr/lib64/python3.13/site-packages/pymol/wizard/pseudoatom.py:13: SyntaxWarning: invalid escape sequence '\8'
/usr/lib64/python3.13/site-packages/pymol/internal.py:252: SyntaxWarning: invalid escape sequence '\.'
/usr/lib64/python3.13/site-packages/pymol/internal.py:253: SyntaxWarning: invalid escape sequence '\.'
/usr/lib64/python3.13/site-packages/pymol/internal.py:254: SyntaxWarning: invalid escape sequence '\.'
/usr/lib64/python3.13/site-packages/pymol/internal.py:257: SyntaxWarning: invalid escape sequence '\.'
/usr/lib64/python3.13/site-packages/pymol/movie.py:818: SyntaxWarning: invalid escape sequence '\W'
/usr/lib64/python3.13/site-packages/pymol/moving.py:733: SyntaxWarning: invalid escape sequence '\s'
/usr/lib64/python3.13/site-packages/pymol/parser.py:48: SyntaxWarning: invalid escape sequence '\['
/usr/lib64/python3.13/site-packages/pymol/parser.py:408: SyntaxWarning: invalid escape sequence '\.'
/usr/lib64/python3.13/site-packages/pymol/viewing.py:899: SyntaxWarning: invalid escape sequence '\.'
/usr/lib64/python3.13/site-packages/pymol/viewing.py:912: SyntaxWarning: invalid escape sequence '\.'
/usr/lib64/python3.13/site-packages/pymol/viewing.py:914: SyntaxWarning: invalid escape sequence '\.'
/usr/lib/python3.13/site-packages/setuptools/command/sdist.py:115: SetuptoolsDeprecationWarning: `build_py` command does not inherit from setuptools' `build_py`.
!!

        ********************************************************************************
        Custom 'build_py' does not implement 'get_data_files_without_manifest'.
        Please extend command classes from setuptools instead of distutils.

        See https://peps.python.org/pep-0632/ for details.
        ********************************************************************************

!!
  self._add_data_files(self._safe_data_files(build_py))
copying data -> /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/data
copying test -> /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/test
copying examples -> /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/examples
Exception ignored in: <function Pool.__del__ at 0x7f22044f8180>
Traceback (most recent call last):
  File "/usr/lib64/python3.13/multiprocessing/pool.py", line 271, in __del__
  File "/usr/lib64/python3.13/multiprocessing/queues.py", line 397, in put
  File "/usr/lib64/python3.13/multiprocessing/connection.py", line 200, in send_bytes
  File "/usr/lib64/python3.13/multiprocessing/connection.py", line 416, in _send_bytes
AttributeError: 'NoneType' object has no attribute 'pack'
+ rm -rfv /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/bin/__pycache__
+ echo '#!/bin/sh'
+ echo 'export PYMOL_PATH=/usr/lib64/python3.13/site-packages/pymol'
+ echo 'exec /usr/bin/python3 /usr/lib64/python3.13/site-packages/pymol/__init__.py "$@"'
+ cp -a data examples test /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/
+ rm -f /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/examples/devel/link_demo.py
+ rm -f /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/examples/devel/particle01.py
+ rm -f /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/examples/devel/particle02.py
+ rm -f /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/test/inp/B03.py
+ rm -f /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/test/inp/B05.py
+ rm -f /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/test/inp/B11.py
+ rm -f /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/test/ref/T01.log
+ rm -f /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/pymol_path/examples/devel/link_demo.py
+ rm -f /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/pymol_path/examples/devel/particle01.py
+ rm -f /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/pymol_path/examples/devel/particle02.py
+ rm -f /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/pymol_path/test/inp/B03.py
+ rm -f /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/pymol_path/test/inp/B05.py
+ rm -f /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/pymol_path/test/inp/B11.py
+ rm -f /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/pymol_path/test/ref/T01.log
+ mkdir -p /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/bin
+ install -p -m 755 pymol /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/bin/
+ desktop-file-install --vendor= --dir=/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/share/applications /builddir/build/SOURCES/pymol.desktop
+ mkdir -p /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/share/pixmaps
+ install -p -m 644 /builddir/build/SOURCES/pymol.png /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/share/pixmaps/
+ mkdir -p /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/share/metainfo
+ install -p -m 644 /builddir/build/SOURCES/pymol.appdata.xml /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/share/metainfo/
+ appstream-util validate-relax --nonet /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT//usr/share/metainfo/pymol.appdata.xml
/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT//usr/share/metainfo/pymol.appdata.xml: OK
+ /usr/bin/find-debuginfo -j4 --strict-build-id -m -i --build-id-seed 2.5.0-13.fc42 --unique-debug-suffix -2.5.0-13.fc42.x86_64 --unique-debug-src-base pymol-2.5.0-13.fc42.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/pymol-2.5.0-build/pymol-open-source-2.5.0
find-debuginfo: starting
Extracting debug info from 2 files
DWARF-compressing 2 files
sepdebugcrcfix: Updated 2 CRC32s, 0 CRC32s did match.
Creating .debug symlinks for symlinks to ELF files
Copying sources found by 'debugedit -l' to /usr/src/debug/pymol-2.5.0-13.fc42.x86_64
51230 blocks
find-debuginfo: done
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-ldconfig
+ /usr/lib/rpm/brp-compress
+ /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip
+ /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/check-rpaths
+ /usr/lib/rpm/redhat/brp-mangle-shebangs
*** WARNING: ./usr/src/debug/pymol-2.5.0-13.fc42.x86_64/layer3/MaeExportHelpers.h is executable but has no shebang, removing executable bit
*** WARNING: ./usr/src/debug/pymol-2.5.0-13.fc42.x86_64/layer3/MaeExportHelpers.cpp is executable but has no shebang, removing executable bit
*** WARNING: ./usr/src/debug/pymol-2.5.0-13.fc42.x86_64/layer0/GraphicsUtil.h is executable but has no shebang, removing executable bit
*** WARNING: ./usr/src/debug/pymol-2.5.0-13.fc42.x86_64/layer0/GraphicsUtil.cpp is executable but has no shebang, removing executable bit
mangling shebang in /usr/bin/pymol from /bin/sh to #!/usr/bin/sh
+ /usr/lib/rpm/brp-remove-la-files
+ env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4
Bytecompiling .py files below /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib/debug/usr/lib64/python3.13 using python3.13
Bytecompiling .py files below /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13 using python3.13
/usr/lib64/python3.13/site-packages/pmg_tk/skins/normal/__init__.py:849: SyntaxWarning: invalid escape sequence '\.'
/usr/lib64/python3.13/site-packages/pmg_tk/skins/normal/__init__.py:889: SyntaxWarning: invalid escape sequence '\.'
/usr/lib64/python3.13/site-packages/chempy/sdf.py:23: SyntaxWarning: invalid escape sequence '\s'
/usr/lib64/python3.13/site-packages/chempy/sdf.py:24: SyntaxWarning: invalid escape sequence '\s'
/usr/lib64/python3.13/site-packages/chempy/sdf.py:23: SyntaxWarning: invalid escape sequence '\s'
/usr/lib64/python3.13/site-packages/chempy/sdf.py:24: SyntaxWarning: invalid escape sequence '\s'
/usr/lib64/python3.13/site-packages/pmg_tk/skins/normal/__init__.py:849: SyntaxWarning: invalid escape sequence '\.'
/usr/lib64/python3.13/site-packages/pmg_tk/skins/normal/__init__.py:889: SyntaxWarning: invalid escape sequence '\.'
/usr/lib64/python3.13/site-packages/pymol/data/chempy/tinker/make_simple.py:147: SyntaxWarning: invalid escape sequence '\*'
/usr/lib64/python3.13/site-packages/pymol/data/chempy/tinker/make_simple.py:151: SyntaxWarning: invalid escape sequence '\*'
/usr/lib64/python3.13/site-packages/pymol/data/chempy/tinker/make_simple.py:147: SyntaxWarning: invalid escape sequence '\*'
/usr/lib64/python3.13/site-packages/pymol/data/chempy/tinker/make_simple.py:151: SyntaxWarning: invalid escape sequence '\*'
/usr/lib64/python3.13/site-packages/pymol/examples/devel/webgui02.py:156: SyntaxWarning: invalid escape sequence '\='
/usr/lib64/python3.13/site-packages/pymol/examples/devel/webgui02.py:156: SyntaxWarning: invalid escape sequence '\='
/usr/lib64/python3.13/site-packages/pymol/movie.py:818: SyntaxWarning: invalid escape sequence '\W'
/usr/lib64/python3.13/site-packages/pymol/movie.py:818: SyntaxWarning: invalid escape sequence '\W'
/usr/lib64/python3.13/site-packages/pymol/moving.py:733: SyntaxWarning: invalid escape sequence '\s'
/usr/lib64/python3.13/site-packages/pymol/moving.py:733: SyntaxWarning: invalid escape sequence '\s'
/usr/lib64/python3.13/site-packages/pymol/parser.py:48: SyntaxWarning: invalid escape sequence '\['
/usr/lib64/python3.13/site-packages/pymol/parser.py:408: SyntaxWarning: invalid escape sequence '\.'
/usr/lib64/python3.13/site-packages/pymol/internal.py:252: SyntaxWarning: invalid escape sequence '\.'
/usr/lib64/python3.13/site-packages/pymol/internal.py:253: SyntaxWarning: invalid escape sequence '\.'
/usr/lib64/python3.13/site-packages/pymol/internal.py:254: SyntaxWarning: invalid escape sequence '\.'
/usr/lib64/python3.13/site-packages/pymol/internal.py:257: SyntaxWarning: invalid escape sequence '\.'
/usr/lib64/python3.13/site-packages/pymol/parser.py:48: SyntaxWarning: invalid escape sequence '\['
/usr/lib64/python3.13/site-packages/pymol/parser.py:408: SyntaxWarning: invalid escape sequence '\.'
/usr/lib64/python3.13/site-packages/pymol/internal.py:252: SyntaxWarning: invalid escape sequence '\.'
/usr/lib64/python3.13/site-packages/pymol/internal.py:253: SyntaxWarning: invalid escape sequence '\.'
/usr/lib64/python3.13/site-packages/pymol/internal.py:254: SyntaxWarning: invalid escape sequence '\.'
/usr/lib64/python3.13/site-packages/pymol/internal.py:257: SyntaxWarning: invalid escape sequence '\.'
/usr/lib64/python3.13/site-packages/pymol/plugins/installation.py:23: SyntaxWarning: invalid escape sequence '\p'
/usr/lib64/python3.13/site-packages/pymol/plugins/installation.py:23: SyntaxWarning: invalid escape sequence '\p'
/usr/lib64/python3.13/site-packages/pymol/viewing.py:899: SyntaxWarning: invalid escape sequence '\.'
/usr/lib64/python3.13/site-packages/pymol/viewing.py:912: SyntaxWarning: invalid escape sequence '\.'
/usr/lib64/python3.13/site-packages/pymol/viewing.py:914: SyntaxWarning: invalid escape sequence '\.'
/usr/lib64/python3.13/site-packages/pymol/viewing.py:899: SyntaxWarning: invalid escape sequence '\.'
/usr/lib64/python3.13/site-packages/pymol/viewing.py:912: SyntaxWarning: invalid escape sequence '\.'
/usr/lib64/python3.13/site-packages/pymol/viewing.py:914: SyntaxWarning: invalid escape sequence '\.'
/usr/lib64/python3.13/site-packages/pymol/wizard/pseudoatom.py:13: SyntaxWarning: invalid escape sequence '\8'
/usr/lib64/python3.13/site-packages/pymol/wizard/pseudoatom.py:13: SyntaxWarning: invalid escape sequence '\8'
+ /usr/lib/rpm/redhat/brp-python-hardlink
+ /usr/bin/add-determinism --brp -j4 /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT
/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol2/__pycache__/cmd2.cpython-313.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol2/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/examples/chempy/__pycache__/generate_amber.cpython-313.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/examples/chempy/__pycache__/generate_mmff.cpython-313.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/examples/cookbook/__pycache__/symsph.cpython-313.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/examples/cookbook/__pycache__/dali.cpython-313.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/examples/cookbook/__pycache__/build_peptide.cpython-313.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/examples/devel/__pycache__/webgui01.cpython-313.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/examples/devel/__pycache__/webgui02.cpython-313.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/examples/devel/__pycache__/tkwindow.cpython-313.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/examples/devel/__pycache__/syncmol.cpython-313.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/examples/devel/__pycache__/xmlrpc02.cpython-313.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/examples/devel/__pycache__/xmlrpc01.cpython-313.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/examples/devel/__pycache__/povray01.cpython-313.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/examples/devel/__pycache__/gl03.cpython-313.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/examples/devel/__pycache__/start_pymol.cpython-313.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/examples/devel/__pycache__/pick_wiz.cpython-313.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/examples/devel/__pycache__/sele_wiz.cpython-313.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/examples/devel/__pycache__/my_ext_gui.cpython-313.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/examples/devel/__pycache__/gl02.cpython-313.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/examples/devel/__pycache__/membrane.cpython-313.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/examples/devel/__pycache__/mutate02.cpython-313.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/examples/devel/__pycache__/count_molecules.cpython-313.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/examples/devel/__pycache__/importing.cpython-313.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/examples/devel/__pycache__/gl01.cpython-313.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/examples/devel/__pycache__/extend_demo01.cpython-313.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/examples/devel/__pycache__/click_ordered_list.cpython-313.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/examples/devel/__pycache__/chempy_model02.cpython-313.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/examples/devel/__pycache__/cgo06.cpython-313.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/examples/devel/__pycache__/chempy_model01.cpython-313.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/examples/devel/__pycache__/chempy_model03.cpython-313.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/examples/devel/__pycache__/cgo_plane.cpython-313.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/examples/devel/__pycache__/cgo_axes.cpython-313.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/examples/devel/__pycache__/cgo05.cpython-313.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/examples/devel/__pycache__/cgo_3Dtext01.cpython-313.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/examples/devel/__pycache__/cgo_label_hack.cpython-313.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/examples/devel/__pycache__/cgo08.cpython-313.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/examples/devel/__pycache__/cgo04.cpython-313.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/examples/devel/__pycache__/cgo07.cpython-313.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/examples/devel/__pycache__/cgo03.cpython-313.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/examples/devel/__pycache__/cgo02.cpython-313.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/examples/devel/__pycache__/cgo01.cpython-313.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pymol/examples/launching/__pycache__/launch_demo.cpython-313.opt-1.pyc: rewriting with normalized contents
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/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/chempy/__pycache__/brick.cpython-313.opt-1.pyc: replacing with normalized version
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/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/chempy/tinker/__pycache__/realtime.cpython-313.opt-1.pyc: rewriting with normalized contents
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/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/pmg_tk/skins/normal/__pycache__/builder.cpython-313.opt-1.pyc: rewriting with normalized contents
Scanned 123 directories and 1466 files,
               processed 252 inodes,
               252 modified (24 replaced + 228 rewritten),
               0 unsupported format, 0 errors
Reading /builddir/build/BUILD/pymol-2.5.0-build/SPECPARTS/rpm-debuginfo.specpart
Processing files: pymol-2.5.0-13.fc42.x86_64
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.qL5oDT
+ umask 022
+ cd /builddir/build/BUILD/pymol-2.5.0-build
+ cd pymol-open-source-2.5.0
+ DOCDIR=/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/share/doc/pymol
+ export LC_ALL=C.UTF-8
+ LC_ALL=C.UTF-8
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/share/doc/pymol
+ cp -pr /builddir/build/BUILD/pymol-2.5.0-build/pymol-open-source-2.5.0/AUTHORS /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/share/doc/pymol
+ cp -pr /builddir/build/BUILD/pymol-2.5.0-build/pymol-open-source-2.5.0/DEVELOPERS /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/share/doc/pymol
+ cp -pr /builddir/build/BUILD/pymol-2.5.0-build/pymol-open-source-2.5.0/README.md /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/share/doc/pymol
+ cp -pr /builddir/build/BUILD/pymol-2.5.0-build/pymol-open-source-2.5.0/ChangeLog /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/share/doc/pymol
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.kiWlWy
+ umask 022
+ cd /builddir/build/BUILD/pymol-2.5.0-build
+ cd pymol-open-source-2.5.0
+ LICENSEDIR=/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/share/licenses/pymol
+ export LC_ALL=C.UTF-8
+ LC_ALL=C.UTF-8
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/share/licenses/pymol
+ cp -pr /builddir/build/BUILD/pymol-2.5.0-build/pymol-open-source-2.5.0/LICENSE /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/share/licenses/pymol
+ RPM_EC=0
++ jobs -p
+ exit 0
Provides: PyMOL(x86-64) = 0:2.5.0-13.fc42 application() application(pymol.desktop) metainfo() metainfo(pymol.appdata.xml) pymol = 2.5.0-13.fc42 pymol(x86-64) = 2.5.0-13.fc42 python3.13dist(pymol) = 2.5 python3dist(pymol) = 2.5
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: /usr/bin/sh libGL.so.1()(64bit) libGLEW.so.2.2()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_2.7)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libfreetype.so.6()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_1.0)(64bit) libgomp.so.1(GOMP_4.0)(64bit) libgomp.so.1(OMP_1.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.27)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.35)(64bit) libm.so.6(GLIBC_2.38)(64bit) libnetcdf.so.19()(64bit) libpng16.so.16()(64bit) libpng16.so.16(PNG16_0)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libxml2.so.2()(64bit) libxml2.so.2(LIBXML2_2.4.30)(64bit) libxml2.so.2(LIBXML2_2.6.0)(64bit) libxml2.so.2(LIBXML2_2.6.3)(64bit) python(abi) = 3.13 rtld(GNU_HASH)
Processing files: pymol-debugsource-2.5.0-13.fc42.x86_64
Provides: pymol-debugsource = 2.5.0-13.fc42 pymol-debugsource(x86-64) = 2.5.0-13.fc42
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: pymol-debuginfo-2.5.0-13.fc42.x86_64
Provides: debuginfo(build-id) = 02c077e883692edbbfc57b3a7eda2bd50c1eafe5 debuginfo(build-id) = f1aac1d78b416ad431c6fbca78efff4ee76d9d28 pymol-debuginfo = 2.5.0-13.fc42 pymol-debuginfo(x86-64) = 2.5.0-13.fc42
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: pymol-debugsource(x86-64) = 2.5.0-13.fc42
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT
Wrote: /builddir/build/RPMS/pymol-2.5.0-13.fc42.x86_64.rpm
Wrote: /builddir/build/RPMS/pymol-debugsource-2.5.0-13.fc42.x86_64.rpm
Wrote: /builddir/build/RPMS/pymol-debuginfo-2.5.0-13.fc42.x86_64.rpm
Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.jnl2Rs
+ umask 022
+ cd /builddir/build/BUILD/pymol-2.5.0-build
+ test -d /builddir/build/BUILD/pymol-2.5.0-build
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/pymol-2.5.0-build
+ rm -rf /builddir/build/BUILD/pymol-2.5.0-build
+ RPM_EC=0
++ jobs -p
+ exit 0
Finish: rpmbuild pymol-2.5.0-13.fc42.src.rpm
Finish: build phase for pymol-2.5.0-13.fc42.src.rpm
INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan
INFO: /var/lib/mock/fedora-rawhide-x86_64-1725475717.931035/root/var/log/dnf5.log
INFO: Done(/var/lib/copr-rpmbuild/results/pymol-2.5.0-13.fc42.src.rpm) Config(child) 3 minutes 22 seconds
INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results
INFO: Cleaning up build root ('cleanup_on_success=True')
Start: clean chroot
INFO: unmounting tmpfs.
Finish: clean chroot
Finish: run
Running RPMResults tool
Package info:
{
    "packages": [
        {
            "name": "pymol",
            "epoch": null,
            "version": "2.5.0",
            "release": "13.fc42",
            "arch": "x86_64"
        },
        {
            "name": "pymol-debugsource",
            "epoch": null,
            "version": "2.5.0",
            "release": "13.fc42",
            "arch": "x86_64"
        },
        {
            "name": "pymol",
            "epoch": null,
            "version": "2.5.0",
            "release": "13.fc42",
            "arch": "src"
        },
        {
            "name": "pymol-debuginfo",
            "epoch": null,
            "version": "2.5.0",
            "release": "13.fc42",
            "arch": "x86_64"
        }
    ]
}
RPMResults finished